Homologs of GFF4696 from Variovorax sp. SCN45

UPF0307 protein YjgA
SEED: FIG138315: Putative alpha helix protein
KEGG: ribosome-associated protein

89 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF4696 UPF0307 protein YjgA no data 100 100
o Variovorax sp. OAS795 ABID97_RS20700 ribosome biogenesis factor YjgA no data 93 100
o Acidovorax sp. GW101-3H11 Ac3H11_3263 FIG138315: Putative alpha helix protein no data 67 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3654 FIG138315: Putative alpha helix protein cofit 66 95
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS13960 DUF615 domain-containing protein insig. 49 78
  Ralstonia solanacearum UW163 UW163_RS15850 DUF615 domain-containing protein no data 49 78
o Ralstonia sp. UNC404CL21Col ABZR87_RS09655 ribosome biogenesis factor YjgA insig. 48 83
  Ralstonia solanacearum GMI1000 RS_RS04695 DUF615 domain-containing protein insig. 49 75
o Ralstonia solanacearum PSI07 RPSI07_RS19510 DUF615 domain-containing protein insig. 46 83
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04303 ribosome-associated protein insig. 45 75
  Burkholderia phytofirmans PsJN BPHYT_RS14710 hypothetical protein insig. 45 75
  Paraburkholderia graminis OAS925 ABIE53_003117 ribosome-associated protein insig. 45 75
  Paraburkholderia sabiae LMG 24235 QEN71_RS04265 ribosome biogenesis factor YjgA cofit 45 75
o Cupriavidus basilensis FW507-4G11 RR42_RS14755 hypothetical protein sig. 41 83
o Herbaspirillum seropedicae SmR1 HSERO_RS09260 hypothetical protein insig. 40 84
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1884.1 FIG138315: Putative alpha helix protein no data 41 73
o Methylophilus sp. DMC18 GFF831 hypothetical protein insig. 40 83
  Vibrio cholerae E7946 ATCC 55056 CSW01_12850 DUF615 family protein insig. 44 73
  Erwinia tracheiphila SCR3 LU632_RS02140 ribosome-associated protein cofit 40 73
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_06775 ribosome-associated protein insig. 40 73
  Rhodanobacter denitrificans MT42 LRK55_RS03135 ribosome biogenesis factor YjgA no data 43 74
  Shewanella sp. ANA-3 Shewana3_3632 hypothetical protein (RefSeq) cofit 37 74
  Pantoea sp. MT58 IAI47_02760 ribosome-associated protein no data 39 73
  Shewanella oneidensis MR-1 SO4079 conserved hypothetical protein (NCBI ptt file) insig. 36 74
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS06570 DUF615 domain-containing protein insig. 40 76
  Lysobacter sp. OAE881 ABIE51_RS06800 ribosome biogenesis factor YjgA insig. 40 77
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS11360 ribosome-associated protein insig. 39 73
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF903 FIG138315: Putative alpha helix protein no data 39 73
  Klebsiella pneumoniae MKP103 KDGMDA_11325 ribosome-associated protein sig. 39 77
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS03385 DUF615 domain-containing protein no data 42 74
  Shewanella amazonensis SB2B Sama_0481 hypothetical protein (RefSeq) sig. 40 73
  Erwinia amylovora T8 OLJFJH_02360 ribosome-associated protein no data 39 73
  Rhodanobacter sp. FW510-T8 OKGIIK_10270 DUF615 domain-containing protein insig. 42 74
  Enterobacter sp. TBS_079 MPMX20_00516 hypothetical protein no data 39 73
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS21710 ribosome biogenesis factor YjgA insig. 40 72
  Klebsiella michiganensis M5al BWI76_RS02845 hypothetical protein no data 39 73
  Escherichia fergusonii Becca EFB2_04299 hypothetical protein sig. 38 77
  Escherichia coli Nissle 1917 ECOLIN_RS24565 ribosome biogenesis factor YjgA insig. 38 77
  Castellaniella sp019104865 MT123 ABCV34_RS10615 ribosome biogenesis factor YjgA insig. 38 77
  Escherichia coli BL21 ECD_04102 ribosome-associated UPF0307 family protein sig. 38 77
  Escherichia coli ECOR27 NOLOHH_04190 yjgA ribosome-associated protein strong 38 77
  Escherichia coli ECOR38 HEPCGN_10130 yjgA ribosome-associated protein sig. 38 77
  Escherichia coli ECRC100 OKFHMN_11930 yjgA ribosome-associated protein cofit 38 77
  Escherichia coli ECRC101 MCAODC_02435 yjgA ribosome-associated protein strong 38 77
  Escherichia coli ECRC102 NIAGMN_09780 yjgA ribosome-associated protein insig. 38 77
  Escherichia coli ECRC62 BNILDI_07320 yjgA ribosome-associated protein strong 38 77
  Escherichia coli ECRC98 JDDGAC_15570 yjgA ribosome-associated protein strong 38 77
  Escherichia coli ECRC99 KEDOAH_16225 yjgA ribosome-associated protein no data 38 77
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03801 hypothetical protein strong 38 77
  Escherichia coli BW25113 b4234 yjgA hypothetical protein (NCBI) strong 38 77
  Enterobacter asburiae PDN3 EX28DRAFT_3421 Uncharacterized protein conserved in bacteria no data 38 73
  Alteromonas macleodii MIT1002 MIT1002_00229 x96 protein insig. 39 72
  Pseudomonas sp. BP01 JOY50_RS11075 yjgA ribosome biogenesis factor YjgA insig. 38 72
  Pectobacterium carotovorum WPP14 HER17_RS20095 ribosome-associated protein no data 36 73
  Serratia liquefaciens MT49 IAI46_22590 ribosome-associated protein no data 37 73
  Marinobacter adhaerens HP15 HP15_2448 protein belonging to uncharacterized protein family UPF0307 insig. 38 72
  Pseudomonas putida KT2440 PP_0941 putative ribosome associated protein sig. 37 75
  Kangiella aquimarina DSM 16071 B158DRAFT_2073 Uncharacterized protein conserved in bacteria insig. 35 75
  Dickeya dadantii 3937 DDA3937_RS01495 ribosome-associated protein strong 39 73
  Pseudomonas sp. S08-1 OH686_08575 UPF0307 protein YjgA insig. 36 72
  Dickeya dianthicola ME23 DZA65_RS01475 ribosome-associated protein no data 38 73
  Pseudomonas sp. SVBP6 COO64_RS04230 yjgA ribosome biogenesis factor YjgA insig. 36 72
  Dickeya dianthicola 67-19 HGI48_RS01410 ribosome-associated protein insig. 38 73
  Pseudomonas syringae pv. syringae B728a Psyr_4155 Protein of unknown function DUF615 insig. 38 72
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4155 Protein of unknown function DUF615 insig. 38 72
  Pseudomonas segetis P6 ACVTMO_RS19150 yjgA ribosome biogenesis factor YjgA insig. 34 74
  Pseudomonas simiae WCS417 PS417_04290 hypothetical protein strong 35 72
  Pseudomonas sp. DMC3 GFF1817 hypothetical protein cofit 36 74
  Pseudomonas orientalis W4I3 QF045_RS07280 ribosome biogenesis factor YjgA insig. 35 72
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1091 FIG138315: Putative alpha helix protein sig. 36 74
  Pseudomonas fluorescens FW300-N2C3 AO356_07090 hypothetical protein insig. 36 72
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3279 FIG138315: Putative alpha helix protein strong 36 72
  Pseudomonas fluorescens GW456-L13 PfGW456L13_5025 FIG138315: Putative alpha helix protein insig. 35 74
  Pseudomonas sp. RS175 PFR28_00162 hypothetical protein sig. 36 72
  Pseudomonas fluorescens SBW25 PFLU_RS04345 ribosome-associated protein insig. 35 72
  Pseudomonas fluorescens SBW25-INTG PFLU_RS04345 ribosome-associated protein strong 35 72
  Pseudomonas fluorescens FW300-N2E3 AO353_05210 hypothetical protein sig. 36 72
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01063 hypothetical protein cofit 35 72
  Pseudomonas stutzeri RCH2 Psest_3319 Uncharacterized protein conserved in bacteria insig. 35 74
  Rahnella sp. WP5 EX31_RS12315 ribosome-associated protein sig. 37 73
  Desulfovibrio vulgaris Hildenborough JW710 DVU0975 conserved hypothetical protein (TIGR) insig. 36 74
  Desulfovibrio vulgaris Miyazaki F DvMF_1335 hypothetical protein (RefSeq) insig. 35 73
  Pseudomonas aeruginosa MRSN321 DY961_RS24110 yjgA;go_process=ribosome ribosome biogenesis factor YjgA insig. 34 74
  Pseudomonas aeruginosa PA14 IKLFDK_01715 ribosome-associated protein sig. 34 74
  Pseudomonas aeruginosa PUPa3 DQ20_RS56570 yjgA;go_process=ribosome ribosome biogenesis factor YjgA sig. 34 74
  Shewanella loihica PV-4 Shew_0415 hypothetical protein (RefSeq) sig. 36 75
  Dechlorosoma suillum PS Dsui_1235 hypothetical protein strong 34 74
  Acinetobacter baumannii LAC-4 RR41_RS16030 ribosome-associated protein insig. 32 66
  Acinetobacter radioresistens SK82 MPMX26_00549 hypothetical protein strong 31 62