Homologs of GFF3960 from Variovorax sp. SCN45

3'-to-5' oligoribonuclease (orn)
SEED: 3'-to-5' oligoribonuclease (orn)
KEGG: oligoribonuclease

90 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF3960 3'-to-5' oligoribonuclease (orn) strong 100 100
o Variovorax sp. OAS795 ABID97_RS08790 oligoribonuclease strong 95 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5731 3'-to-5' oligoribonuclease (orn) strong 77 97
o Acidovorax sp. GW101-3H11 Ac3H11_1677 3'-to-5' oligoribonuclease (orn) insig. 72 99
o Castellaniella sp019104865 MT123 ABCV34_RS06995 oligoribonuclease no data 71 90
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS13950 oligoribonuclease no data 70 90
o Ralstonia solanacearum UW163 UW163_RS15860 oligoribonuclease no data 70 90
o Ralstonia solanacearum PSI07 RPSI07_RS19520 oligoribonuclease no data 70 90
o Ralstonia solanacearum GMI1000 RS_RS04685 oligoribonuclease no data 69 90
o Herbaspirillum seropedicae SmR1 HSERO_RS07210 oligoribonuclease no data 65 94
o Cupriavidus basilensis FW507-4G11 RR42_RS14770 oligoribonuclease no data 65 94
o Ralstonia sp. UNC404CL21Col ABZR87_RS09645 oligoribonuclease no data 66 98
o Paraburkholderia graminis OAS925 ABIE53_003119 oligoribonuclease no data 63 93
o Paraburkholderia sabiae LMG 24235 QEN71_RS04255 oligoribonuclease no data 63 90
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04301 oligoribonuclease no data 60 98
o Methylophilus sp. DMC18 GFF1173 Oligoribonuclease no data 63 91
o Burkholderia phytofirmans PsJN BPHYT_RS14720 oligoribonuclease no data 62 91
o Dechlorosoma suillum PS Dsui_3222 oligoribonuclease (3'->5' exoribonuclease) no data 58 91
o Erwinia amylovora T8 OLJFJH_02545 oligoribonuclease no data 59 89
o Pectobacterium carotovorum WPP14 HER17_RS02415 oligoribonuclease no data 60 89
o Rahnella sp. WP5 EX31_RS08865 oligoribonuclease no data 57 91
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_06970 orn oligoribonuclease no data 58 88
o Erwinia tracheiphila SCR3 LU632_RS01950 orn oligoribonuclease no data 58 88
o Dickeya dadantii 3937 DDA3937_RS18940 oligoribonuclease no data 57 90
o Klebsiella pneumoniae MKP103 KDGMDA_10980 oligoribonuclease no data 56 91
o Klebsiella pneumoniae MRSN742743 KFA93_RS21120 orn;go_function=3'-5'-RNA oligoribonuclease no data 56 91
o Dickeya dianthicola 67-19 HGI48_RS19035 oligoribonuclease no data 56 90
o Dickeya dianthicola ME23 DZA65_RS20150 oligoribonuclease no data 56 90
o Klebsiella michiganensis M5al BWI76_RS02480 oligoribonuclease no data 56 91
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1989 '3'-to-5' oligoribonuclease (orn)' transl_table=11 no data 56 91
o Escherichia coli ECRC100 OKFHMN_12315 orn oligoribonuclease no data 55 91
o Escherichia coli ECRC101 MCAODC_02825 orn oligoribonuclease no data 55 91
o Escherichia coli ECRC102 NIAGMN_10160 orn oligoribonuclease no data 55 91
o Escherichia coli ECRC98 JDDGAC_15950 orn oligoribonuclease no data 55 91
o Escherichia coli ECRC99 KEDOAH_15850 orn oligoribonuclease no data 55 91
o Serratia liquefaciens MT49 IAI46_01575 oligoribonuclease no data 55 91
o Pantoea sp. MT58 IAI47_02540 oligoribonuclease no data 57 90
o Marinobacter adhaerens HP15 HP15_2506 oligoribonuclease no data 56 88
o Escherichia coli BL21 ECD_04032 oligoribonuclease no data 55 91
o Escherichia fergusonii Becca EFB2_04373 Oligoribonuclease no data 55 91
o Escherichia coli ECOR27 NOLOHH_04575 orn oligoribonuclease no data 55 91
o Escherichia coli ECOR38 HEPCGN_10540 orn oligoribonuclease no data 55 91
o Escherichia coli ECRC62 BNILDI_06915 orn oligoribonuclease no data 55 91
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03880 Oligoribonuclease no data 55 91
o Escherichia coli BW25113 b4162 yjeR orf, hypothetical protein (VIMSS) no data 55 91
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS11135 oligoribonuclease no data 57 90
o Escherichia coli Nissle 1917 ECOLIN_RS24180 oligoribonuclease no data 55 91
o Enterobacter asburiae PDN3 EX28DRAFT_3360 Oligoribonuclease (3'->5' exoribonuclease) no data 55 91
o Enterobacter sp. TBS_079 MPMX20_00443 Oligoribonuclease no data 55 91
o Shewanella sp. ANA-3 Shewana3_0590 oligoribonuclease (RefSeq) no data 55 88
o Pseudomonas aeruginosa MRSN321 DY961_RS10545 orn;go_function=3'-5'-RNA oligoribonuclease strong 55 89
o Pseudomonas aeruginosa PA14 IKLFDK_28785 oligoribonuclease no data 55 89
o Pseudomonas aeruginosa PUPa3 DQ20_RS51510 orn;go_function=3'-5'-RNA oligoribonuclease no data 55 89
o Shewanella oneidensis MR-1 SO0592 orn oligoribonuclease (NCBI ptt file) no data 55 88
o Kangiella aquimarina DSM 16071 B158DRAFT_1946 Oligoribonuclease (3'->5' exoribonuclease) no data 54 92
o Shewanella loihica PV-4 Shew_0559 oligoribonuclease (RefSeq) no data 52 91
o Pseudomonas sp. SVBP6 COO64_RS17860 orn oligoribonuclease no data 56 89
o Pseudomonas segetis P6 ACVTMO_RS20635 orn oligoribonuclease no data 54 90
o Shewanella amazonensis SB2B Sama_3032 oligoribonuclease (RefSeq) no data 55 89
o Pseudomonas sp. S08-1 OH686_09505 3'-to-5' oligoribonuclease (orn) strong 53 91
o Pseudomonas putida KT2440 PP_4902 Oligoribonuclease strong 55 89
o Pseudomonas sp. BP01 JOY50_RS17190 orn oligoribonuclease sig. 55 89
o Pseudomonas stutzeri RCH2 Psest_0500 Oligoribonuclease (3'->5' exoribonuclease) no data 54 89
o Acinetobacter radioresistens SK82 MPMX26_02630 Oligoribonuclease no data 54 88
o Pseudomonas sp. RS175 PFR28_05113 Oligoribonuclease no data 53 89
o Pseudomonas fluorescens FW300-N2C3 AO356_08695 oligoribonuclease no data 53 89
o Pseudomonas sp. DMC3 GFF3207 Oligoribonuclease no data 53 89
o Pseudomonas fluorescens GW456-L13 PfGW456L13_162 3'-to-5' oligoribonuclease (orn) no data 53 89
o Pseudomonas fluorescens FW300-N2E3 AO353_13105 oligoribonuclease no data 53 89
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3622 3'-to-5' oligoribonuclease (orn) no data 52 89
o Alteromonas macleodii MIT1002 MIT1002_00496 Oligoribonuclease no data 51 91
o Pseudomonas simiae WCS417 PS417_02450 oligoribonuclease no data 53 88
o Pseudomonas fluorescens SBW25 PFLU_RS02530 oligoribonuclease no data 53 88
o Pseudomonas fluorescens SBW25-INTG PFLU_RS02530 oligoribonuclease no data 53 88
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00728 Oligoribonuclease no data 53 88
o Pseudomonas orientalis W4I3 QF045_RS05510 oligoribonuclease no data 53 88
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1420 3'-to-5' oligoribonuclease (orn) no data 52 88
o Pseudomonas syringae pv. syringae B728a Psyr_0564 Exonuclease no data 53 90
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0564 Exonuclease no data 53 90
o Acinetobacter baumannii LAC-4 RR41_RS16395 oligoribonuclease no data 53 87
o Vibrio cholerae E7946 ATCC 55056 CSW01_01765 oligoribonuclease no data 50 90
o Lysobacter sp. OAE881 ABIE51_RS09510 oligoribonuclease no data 52 94
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2410.1 3'-to-5' oligoribonuclease (orn) no data 53 85
o Rhodanobacter sp. FW510-T8 OKGIIK_07465 orn oligoribonuclease no data 52 86
o Rhodanobacter denitrificans MT42 LRK55_RS17690 oligoribonuclease no data 52 86
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS17470 oligoribonuclease no data 52 86
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS11525 oligoribonuclease no data 52 86
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS01910 oligoribonuclease no data 52 87
o Mycobacterium tuberculosis H37Rv Rv2511 Oligoribonuclease Orn no data 48 86
o Bifidobacterium breve UCC2003 BBR_RS18035 oligoribonuclease strong 43 91