Homologs of PS417_17935 from Pseudomonas simiae WCS417

endoribonuclease L-PSP
SEED: Bona fide RidA/YjgF/TdcF/RutC subgroup

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_17935 endoribonuclease L-PSP insig. 100 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS07390 RidA family protein insig. 34 92
  Pseudomonas fluorescens SBW25 PFLU_RS20985 RidA family protein insig. 36 87
  Pseudomonas fluorescens SBW25-INTG PFLU_RS20985 RidA family protein insig. 36 87
  Pseudomonas simiae WCS417 PS417_18945 endoribonuclease insig. 36 87
  Serratia liquefaciens MT49 IAI46_02520 RidA family protein insig. 37 85
  Pseudomonas sp. BP01 JOY50_RS07275 RidA family protein no data 33 87
  Pseudomonas sp. RS175 PFR28_02139 hypothetical protein insig. 33 87
  Paraburkholderia sabiae LMG 24235 QEN71_RS11215 RidA family protein cofit 34 85
  Klebsiella michiganensis M5al BWI76_RS12855 enamine deaminase RidA insig. 32 85
  Pseudomonas segetis P6 MPMX49_00560 Putative aminoacrylate peracid reductase RutC insig. 33 85
  Pseudomonas aeruginosa PA14 IKLFDK_26470 enamine deaminase RidA insig. 33 85
  Pseudomonas putida KT2440 PP_3574 conserved protein of unknown function insig. 33 87
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04942 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family insig. 33 87
  Paraburkholderia graminis OAS925 ABIE53_001518 enamine deaminase RidA (YjgF/YER057c/UK114 family) sig. 33 87
  Azospirillum brasilense Sp245 AZOBR_RS30435 endoribonuclease insig. 30 86
  Bosea sp. OAE506 ABIE41_RS18410 Rid family hydrolase insig. 32 96
  Burkholderia phytofirmans PsJN BPHYT_RS11730 endoribonuclease no data 32 87
  Pseudomonas fluorescens FW300-N2E3 AO353_29115 enamine deaminase RidA insig. 32 87
  Pseudomonas sp. SVBP6 COO64_RS23750 RidA family protein insig. 34 75
  Pseudomonas fluorescens FW300-N2C3 AO356_25390 enamine deaminase RidA insig. 34 75
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1341 Bona fide RidA/YjgF/TdcF/RutC subgroup insig. 34 77
  Bosea sp. OAE506 ABIE41_RS18410 Rid family hydrolase insig. 32 84
  Azospirillum brasilense Sp245 AZOBR_RS30935 hypothetical protein insig. 36 76
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_14370 hypothetical protein strong 32 99
  Pectobacterium carotovorum WPP14 HER17_RS18785 RidA family protein insig. 31 83
  Azospirillum sp. SherDot2 MPMX19_03400 hypothetical protein insig. 30 77
  Xanthobacter sp. DMC5 GFF1707 Putative aminoacrylate peracid reductase RutC insig. 34 79
o Acinetobacter baumannii LAC-4 RR41_RS16150 RidA family protein insig. 27 90
  Bosea sp. OAE506 ABIE41_RS06350 RidA family protein insig. 34 77
  Dinoroseobacter shibae DFL-12 Dshi_1385 Endoribonuclease L-PSP (RefSeq) insig. 36 77
  Paraburkholderia sabiae LMG 24235 QEN71_RS33350 RidA family protein insig. 35 91
o Phaeobacter inhibens DSM 17395 PGA1_c12800 endoribonuclease-like protein no data 30 81
  Cupriavidus basilensis FW507-4G11 RR42_RS24575 endoribonuclease L-PSP insig. 39 81
  Synechococcus elongatus PCC 7942 Synpcc7942_2408 hypothetical protein insig. 34 94
o Sinorhizobium meliloti 1021 SMc03796 hypothetical protein insig. 35 92
  Pseudomonas putida KT2440 PP_3522 conserved protein of unknown function insig. 33 92
  Rhizobium sp. OAE497 ABIE40_RS29995 aldo/keto reductase insig. 31 81
  Variovorax sp. SCN45 GFF4158 hypothetical protein insig. 31 81
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01079 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family insig. 33 94
o Sphingobium sp. HT1-2 GFF671 RidA/YER057c/UK114 superfamily, group 6 cofit 31 92
  Bosea sp. OAE506 ABIE41_RS11850 RidA family protein insig. 29 92
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1327 endoribonuclease L-PSP, putative sig. 31 70
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04265 Rid family hydrolase insig. 31 89
  Mycobacterium tuberculosis H37Rv Rv2704 Conserved protein insig. 29 93
  Phaeobacter inhibens DSM 17395 PGA1_c12540 Putative translation initiation inhibitor, yjgF family insig. 32 84
o Synechocystis sp000284455 PCC 6803 SGL_RS16000 RidA family protein insig. 30 87
  Sinorhizobium meliloti 1021 SM_b21123 translation initiation inhibitor insig. 28 80
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04280 Rid family hydrolase insig. 25 92
  Shewanella loihica PV-4 Shew_0101 endoribonuclease L-PSP (RefSeq) insig. 29 96
  Sinorhizobium meliloti 1021 SMa2201 hypothetical protein insig. 29 80
  Xanthobacter sp. DMC5 GFF465 Putative aminoacrylate peracid reductase RutC insig. 34 73
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS18400 RidA family protein strong 33 80
  Pseudomonas sp. BP01 JOY50_RS03005 RidA family protein no data 29 74
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS02020 RidA family protein insig. 31 80
  Acinetobacter radioresistens SK82 MPMX26_02797 2-iminobutanoate/2-iminopropanoate deaminase strong 29 81
  Phocaeicola dorei CL03T12C01 ABI39_RS14715 RidA family protein strong 32 80
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_931 Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ (TC 3.A.1.3.1) insig. 29 80
  Pseudomonas aeruginosa PA14 IKLFDK_07500 RidA family protein insig. 29 76
  Acinetobacter baumannii LAC-4 RR41_RS17975 RidA family protein insig. 30 75
  Rhodospirillum rubrum S1H Rru_A1174 Endoribonuclease L-PSP (NCBI) sig. 42 47
  Phaeobacter inhibens DSM 17395 PGA1_c26890 putative endoribonuclease insig. 31 72
  Variovorax sp. OAS795 ABID97_RS01305 Rid family hydrolase insig. 29 81
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_179 Endoribonuclease L-PSP no data 28 80
  Pseudomonas putida KT2440 PP_2689 putative Endoribonuclease insig. 27 70
  Acidovorax sp. GW101-3H11 Ac3H11_3728 Bona fide RidA/YjgF/TdcF/RutC subgroup insig. 34 71
  Ralstonia solanacearum GMI1000 RS_RS23530 RidA family protein no data 31 80
  Ralstonia solanacearum GMI1000 RS_RS23660 RidA family protein no data 31 80
  Pseudomonas sp. SVBP6 COO64_RS08195 RidA family protein insig. 31 90
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF808 Bona fide RidA/YjgF/TdcF/RutC subgroup insig. 28 93
  Shewanella oneidensis MR-1 SO1404 endoribonuclease L-PSP, putative (NCBI ptt file) insig. 31 74
  Sinorhizobium meliloti 1021 SMa2289 hypothetical protein insig. 31 71
  Paraburkholderia graminis OAS925 ABIE53_004559 enamine deaminase RidA (YjgF/YER057c/UK114 family) no data 30 75
  Dechlorosoma suillum PS Dsui_0312 endoribonuclease L-PSP, putative no data 29 81
  Magnetospirillum magneticum AMB-1 AMB_RS10855 RidA family protein insig. 28 82
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1205.1 hypothetical protein cofit 35 70
  Acinetobacter baumannii LAC-4 RR41_RS01650 RidA family protein sig. 28 81
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01145 Putative aminoacrylate peracid reductase RutC cofit 29 80
  Burkholderia phytofirmans PsJN BPHYT_RS35450 endoribonuclease L-PSP no data 31 75
  Pantoea sp. MT58 IAI47_12520 pyrimidine utilization protein C insig. 30 71
  Rhodopseudomonas palustris CGA009 TX73_013730 RidA family protein insig. 27 82
  Klebsiella pneumoniae MKP103 KDGMDA_23675 RidA family protein sig. 30 90
  Sinorhizobium meliloti 1021 SMc01714 hypothetical protein insig. 24 91
  Paraburkholderia sabiae LMG 24235 QEN71_RS16075 RidA family protein insig. 28 81
  Pseudomonas sp. S08-1 OH686_23590 RidA/YER057c/UK114 superfamily protein insig. 32 82
  Magnetospirillum magneticum AMB-1 AMB_RS19400 RidA family protein insig. 30 93
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03698 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family no data 30 75
  Bosea sp. OAE506 ABIE41_RS18410 Rid family hydrolase insig. 28 71
  Rhodopseudomonas palustris CGA009 TX73_004470 RidA family protein insig. 25 92
  Lysobacter sp. OAE881 ABIE51_RS17260 RidA family protein strong 32 70
  Rhodanobacter sp. FW510-T8 OKGIIK_12095 ridA reactive intermediate/imine deaminase cofit 33 70
  Rahnella sp. WP5 EX31_RS24080 pyrimidine utilization protein C insig. 32 71
  Klebsiella michiganensis M5al BWI76_RS03895 reactive intermediate/imine deaminase insig. 32 63
  Pseudomonas sp. BP01 JOY50_RS11315 RidA family protein insig. 30 81
  Cupriavidus basilensis FW507-4G11 RR42_RS16710 endoribonuclease L-PSP insig. 32 83
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4943 Bona fide RidA/YjgF/TdcF/RutC subgroup no data 32 73
  Sinorhizobium meliloti 1021 SM_b21139 translation initiation inhibitors insig. 32 66
  Ralstonia solanacearum GMI1000 RS_RS23495 RidA family protein no data 31 88
  Ralstonia solanacearum GMI1000 RS_RS23625 RidA family protein no data 31 88
  Rhodanobacter denitrificans MT42 LRK55_RS11525 RidA family protein cofit 30 70