Homologs of GFF3477 from Sphingobium sp. HT1-2

UPF0758 family protein
SEED: DNA repair protein RadC

92 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF3477 UPF0758 family protein cofit 100 100
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3175 DNA repair protein radc insig. 71 100
  Rhodospirillum rubrum S1H Rru_A0732 DNA repair protein RadC (NCBI) insig. 48 91
  Xanthobacter sp. DMC5 GFF65 hypothetical protein insig. 45 90
  Dinoroseobacter shibae DFL-12 Dshi_3569 DNA repair protein RadC (RefSeq) insig. 42 98
  Phaeobacter inhibens DSM 17395 PGA1_c34550 DNA repair protein RadC insig. 44 90
  Rhizobium sp. OAE497 ABIE40_RS08620 DNA repair protein RadC cofit 42 91
  Caulobacter crescentus NA1000 CCNA_02762 DNA repair protein RadC insig. 43 90
  Caulobacter crescentus NA1000 Δfur CCNA_02762 DNA repair protein RadC cofit 43 90
  Sinorhizobium meliloti 1021 SMc00299 DNA repair protein RadC insig. 41 91
  Magnetospirillum magneticum AMB-1 AMB_RS10505 hypothetical protein cofit 41 95
  Bosea sp. OAE506 ABIE41_RS13815 DNA repair protein RadC insig. 41 91
  Azospirillum brasilense Sp245 AZOBR_RS04400 DNA repair protein RadC insig. 43 90
  Azospirillum sp. SherDot2 MPMX19_00291 hypothetical protein insig. 44 89
  Agrobacterium fabrum C58 Atu1607 DNA repair protein insig. 42 91
  Rhodopseudomonas palustris CGA009 TX73_002000 DNA repair protein RadC insig. 39 82
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS00510 DNA repair protein RadC insig. 41 91
  Fusobacterium nucleatum SB010 HUW76_05635 DNA repair protein RadC strong 29 93
  Pseudomonas sp. DMC3 GFF403 hypothetical protein cofit 34 87
  Desulfovibrio vulgaris Miyazaki F DvMF_3086 DNA repair protein RadC (RefSeq) insig. 35 90
  Dechlorosoma suillum PS Dsui_1537 DNA repair protein radc cofit 39 74
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2126 DNA repair protein RadC insig. 33 87
  Desulfovibrio vulgaris Hildenborough JW710 DVU1193 radC DNA repair protein RadC (TIGR) sig. 35 90
  Ralstonia sp. UNC404CL21Col ABZR87_RS00330 DNA repair protein RadC insig. 30 82
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS04710 JAB domain-containing protein insig. 29 91
  Ralstonia solanacearum UW163 UW163_RS08960 JAB domain-containing protein insig. 29 91
  Ralstonia solanacearum PSI07 RPSI07_RS12675 JAB domain-containing protein insig. 29 94
  Ralstonia solanacearum GMI1000 RS_RS12270 JAB domain-containing protein insig. 30 94
  Cupriavidus basilensis FW507-4G11 RR42_RS16995 hypothetical protein insig. 31 84
  Shewanella amazonensis SB2B Sama_0327 radC DNA repair protein RadC (RefSeq) cofit 33 91
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1170 DNA repair protein RadC insig. 31 88
  Pseudomonas fluorescens GW456-L13 PfGW456L13_798 DNA repair protein RadC insig. 32 87
  Serratia liquefaciens MT49 IAI46_24825 DNA repair protein RadC insig. 28 92
  Pseudomonas sp. SVBP6 COO64_RS01465 radC DNA repair protein RadC insig. 33 87
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS17910 DNA repair protein RadC insig. 36 89
  Rhodanobacter sp. FW510-T8 OKGIIK_15660 radC DNA repair protein RadC insig. 35 83
  Pseudomonas aeruginosa MRSN321 DY961_RS12485 radC;go_function=DNA DNA repair protein RadC insig. 34 87
  Pseudomonas aeruginosa PA14 IKLFDK_26860 DNA repair protein RadC insig. 34 87
  Pseudomonas aeruginosa PUPa3 DQ20_RS49645 radC;go_function=DNA DNA repair protein RadC insig. 34 87
  Methylophilus sp. DMC18 GFF1632 hypothetical protein insig. 27 84
  Pseudomonas sp. RS175 PFR28_04412 hypothetical protein insig. 33 87
  Pseudomonas segetis P6 ACVTMO_RS00105 radC RadC family protein insig. 31 83
  Paraburkholderia sabiae LMG 24235 QEN71_RS03085 DNA repair protein RadC insig. 30 85
  Herbaspirillum seropedicae SmR1 HSERO_RS05945 hypothetical protein insig. 27 87
  Pseudomonas stutzeri RCH2 Psest_3803 DNA repair protein radc insig. 34 87
  Erwinia tracheiphila SCR3 LU632_RS21995 radC DNA repair protein RadC insig. 29 83
  Acinetobacter baumannii LAC-4 RR41_RS02900 DNA repair protein RadC insig. 29 77
  Pseudomonas fluorescens SBW25 PFLU_RS29445 JAB domain-containing protein insig. 33 87
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29445 JAB domain-containing protein insig. 33 87
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_07780 radC DNA repair protein RadC cofit 30 73
  Pseudomonas simiae WCS417 PS417_27770 hypothetical protein insig. 33 87
  Burkholderia phytofirmans PsJN BPHYT_RS15625 hypothetical protein insig. 30 85
  Pseudomonas fluorescens FW300-N2E3 AO353_09220 hypothetical protein insig. 33 87
  Shewanella oneidensis MR-1 SO4248 radC DNA repair protein RadC (NCBI ptt file) strong 30 91
  Pseudomonas fluorescens FW300-N2C3 AO356_12545 hypothetical protein insig. 30 87
  Pantoea sp. MT58 IAI47_00620 DNA repair protein RadC insig. 27 85
  Pseudomonas sp. S08-1 OH686_13620 UPF0758 family protein insig. 32 87
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04066 DNA replication and repair protein RadC insig. 30 72
  Shewanella sp. ANA-3 Shewana3_3770 radC DNA repair protein RadC (RefSeq) strong 30 91
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4377 DNA repair protein RadC insig. 30 87
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS18725 JAB domain-containing protein cofit 26 85
  Rahnella sp. WP5 EX31_RS14470 JAB domain-containing protein insig. 31 83
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00021 hypothetical protein cofit 34 87
  Paraburkholderia graminis OAS925 ABIE53_003289 DNA repair protein RadC insig. 30 72
  Rhodanobacter denitrificans MT42 LRK55_RS08695 DNA repair protein RadC insig. 32 83
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09165 DNA repair protein RadC insig. 32 83
  Klebsiella michiganensis M5al BWI76_RS27365 hypothetical protein insig. 27 82
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF371 DNA repair protein RadC insig. 27 83
  Acinetobacter radioresistens SK82 MPMX26_02636 hypothetical protein no data 27 77
  Erwinia amylovora T8 OLJFJH_05795 DNA repair protein RadC insig. 27 83
  Pseudomonas orientalis W4I3 QF045_RS02120 DNA repair protein RadC insig. 33 87
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15615 DNA repair protein RadC insig. 31 91
  Castellaniella sp019104865 MT123 ABCV34_RS00910 DNA repair protein RadC insig. 27 93
  Klebsiella pneumoniae MKP103 KDGMDA_08030 DNA repair protein RadC insig. 25 84
  Klebsiella pneumoniae MRSN742743 KFA93_RS09135 radC;inference=COORDINATES RadC family protein insig. 25 84
  Dickeya dadantii 3937 DDA3937_RS20515 DNA repair protein RadC insig. 27 94
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00064 hypothetical protein insig. 26 83
  Pseudomonas syringae pv. syringae B728a Psyr_0222 DNA replication and repair protein RadC insig. 30 74
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0222 DNA replication and repair protein RadC insig. 30 74
  Pectobacterium carotovorum WPP14 HER17_RS20830 DNA repair protein RadC insig. 27 81
  Escherichia coli ECOR27 NOLOHH_07500 radC DNA repair protein RadC insig. 26 83
  Escherichia coli ECRC62 BNILDI_04015 radC DNA repair protein RadC cofit 26 83
  Escherichia fergusonii Becca EFB2_00175 hypothetical protein insig. 26 83
  Escherichia coli Nissle 1917 ECOLIN_RS20730 DNA repair protein RadC insig. 26 83
  Escherichia coli BW25113 b3638 radC DNA repair protein (VIMSS) insig. 26 83
  Escherichia coli BL21 ECD_03495 UPF0758 family protein insig. 26 83
  Escherichia coli ECOR38 HEPCGN_14445 radC DNA repair protein RadC insig. 26 83
  Escherichia coli ECRC100 OKFHMN_15620 radC DNA repair protein RadC insig. 26 83
  Escherichia coli ECRC101 MCAODC_06130 radC DNA repair protein RadC insig. 26 83
  Escherichia coli ECRC102 NIAGMN_13380 radC DNA repair protein RadC cofit 26 83
  Escherichia coli ECRC98 JDDGAC_19245 radC DNA repair protein RadC insig. 26 83
  Escherichia coli ECRC99 KEDOAH_12530 radC DNA repair protein RadC no data 26 83