Homologs of GFF2001 from Xanthobacter sp. DMC5

HTH-type transcriptional activator RhaS

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF2001 HTH-type transcriptional activator RhaS insig. 100 100
o Dinoroseobacter shibae DFL-12 Dshi_3718 transcriptional regulator, AraC family (RefSeq) cofit 58 99
o Azospirillum sp. SherDot2 MPMX19_03386 HTH-type transcriptional activator RhaR insig. 53 98
o Pseudomonas fluorescens FW300-N2C3 AO356_26625 DNA-binding protein no data 44 98
  Dinoroseobacter shibae DFL-12 Dshi_3708 transcriptional regulator, AraC family (RefSeq) insig. 36 97
o Bosea sp. OAE506 ABIE41_RS18730 helix-turn-helix domain-containing protein insig. 33 99
  Acidovorax sp. GW101-3H11 Ac3H11_97 Transcriptional regulator, AraC family insig. 49 48
o Variovorax sp. OAS795 ABID97_RS27260 AraC family transcriptional regulator no data 28 99
  Bosea sp. OAE506 ABIE41_RS18945 AraC family transcriptional regulator insig. 43 36
  Pseudomonas sp. DMC3 GFF1052 HTH-type transcriptional activator RhaR cofit 39 37
  Phocaeicola dorei CL03T12C01 ABI39_RS01165 helix-turn-helix transcriptional regulator insig. 34 38
  Pseudomonas aeruginosa PUPa3 DQ20_RS34765 AraC family transcriptional regulator insig. 33 49
  Lysobacter sp. OAE881 ABIE51_RS03340 AraC family transcriptional regulator insig. 31 51
  Pseudomonas aeruginosa PA14 IKLFDK_13545 AraC family transcriptional regulator sig. 33 49
  Bacteroides thetaiotaomicron VPI-5482 BT3667 transcriptional regulator (NCBI ptt file) insig. 34 37
  Paraburkholderia graminis OAS925 ABIE53_005062 AraC family transcriptional regulator sig. 34 54
  Enterobacter sp. TBS_079 MPMX20_02552 HTH-type transcriptional activator RhaR insig. 38 36
  Pseudomonas stutzeri RCH2 Psest_2061 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain insig. 37 36
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00290 helix-turn-helix transcriptional regulator insig. 33 38
  Desulfovibrio vulgaris Miyazaki F DvMF_1614 transcriptional regulator, AraC family (RefSeq) insig. 41 33
  Bacteroides thetaiotaomicron VPI-5482 BT4137 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) insig. 38 33
  Pseudomonas aeruginosa MRSN321 DY961_RS03730 AraC family transcriptional regulator insig. 32 49
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4154 Transcriptional regulator, AraC family insig. 38 36
  Pseudomonas sp. RS175 PFR28_01504 HTH-type transcriptional activator RhaR insig. 37 36
  Burkholderia phytofirmans PsJN BPHYT_RS05450 AraC family transcriptional regulator no data 35 41
  Sinorhizobium meliloti 1021 SMc01610 transcriptional regulator insig. 40 36
  Burkholderia phytofirmans PsJN BPHYT_RS29955 AraC family transcriptional regulator insig. 40 38
  Sinorhizobium meliloti 1021 SMa0319 AraC family transcriptional regulator insig. 36 36
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1249 Transcriptional regulator, AraC family insig. 33 52
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02999 transcriptional regulator, AraC family insig. 31 50
  Rhodopseudomonas palustris CGA009 TX73_006805 AraC family transcriptional regulator insig. 34 38
  Pseudomonas stutzeri RCH2 Psest_0723 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain insig. 29 50
  Bacteroides ovatus ATCC 8483 BACOVA_04371 response regulator receiver domain protein insig. 34 30
  Pseudomonas aeruginosa MRSN321 DY961_RS13380 mdrR1;inference=COORDINATES transcriptional regulator MdrR1 insig. 37 35
  Pseudomonas aeruginosa PA14 IKLFDK_20095 transcriptional regulator MdrR1 insig. 37 35
  Pseudomonas aeruginosa PUPa3 DQ20_RS48680 mdrR1;inference=COORDINATES transcriptional regulator MdrR1 strong 37 35
  Bacteroides thetaiotaomicron VPI-5482 BT3172 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) insig. 33 34
  Agrobacterium fabrum C58 Atu4659 AraC family transcriptional regulator strong 37 37
  Rhizobium sp. OAE497 ABIE40_RS12690 AraC family transcriptional regulator insig. 27 92
  Enterobacter sp. TBS_079 MPMX20_02241 HTH-type transcriptional activator RhaS sig. 36 35
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2124.1 hypothetical protein insig. 36 37
  Pseudomonas segetis P6 ACVTMO_RS18995 GlxA family transcriptional regulator insig. 28 54
  Klebsiella pneumoniae MKP103 KDGMDA_23160 AraC family transcriptional regulator insig. 36 36
  Pseudomonas fluorescens FW300-N2E3 AO353_06790 AraC family transcriptional regulator insig. 35 37
  Bacteroides thetaiotaomicron VPI-5482 BT1635 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) insig. 33 31
  Agrobacterium fabrum C58 Atu4297 AraC family transcriptional regulator strong 26 90
  Herbaspirillum seropedicae SmR1 HSERO_RS22565 AraC family transcriptional regulator insig. 34 37
  Rhodopseudomonas palustris CGA009 TX73_006775 AraC family transcriptional regulator insig. 32 66
  Herbaspirillum seropedicae SmR1 HSERO_RS17025 AraC family transcriptional regulator strong 31 47
  Pseudomonas syringae pv. syringae B728a Psyr_1041 transcriptional regulator, AraC family insig. 37 35
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1041 transcriptional regulator, AraC family insig. 37 35
  Variovorax sp. SCN45 GFF3392 Transcriptional regulator, AraC family insig. 38 35
  Xanthobacter sp. DMC5 GFF4033 HTH-type transcriptional activator RhaS insig. 35 36
  Bosea sp. OAE506 ABIE41_RS16450 AraC family transcriptional regulator insig. 37 36
  Pseudomonas sp. RS175 PFR28_03611 HTH-type transcriptional regulator CdhR strong 27 53
  Pseudomonas simiae WCS417 PS417_16110 AraC family transcriptional regulator no data 35 32
  Enterobacter asburiae PDN3 EX28DRAFT_3396 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain cofit 32 35
  Pseudomonas aeruginosa PA14 IKLFDK_03190 AraC family transcriptional regulator insig. 30 85
  Pseudomonas fluorescens FW300-N2E3 AO353_15220 AraC family transcriptional regulator insig. 27 53
  Sinorhizobium meliloti 1021 SM_b20859 AraC family transcriptional regulator insig. 34 35
  Pseudomonas fluorescens FW300-N2C3 AO356_17040 AraC family transcriptional regulator insig. 27 53
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5332 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain insig. 27 53
  Burkholderia phytofirmans PsJN BPHYT_RS16070 AraC family transcriptional regulator insig. 38 37
  Rhizobium sp. OAE497 ABIE40_RS13855 AraC family transcriptional regulator insig. 36 35
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02634 HTH-type transcriptional activator Btr insig. 35 32
  Pseudomonas fluorescens FW300-N2C3 AO356_26250 AraC family transcriptional regulator insig. 33 36
  Pseudomonas sp. SVBP6 COO64_RS11775 GlxA family transcriptional regulator insig. 27 53
  Rhizobium sp. OAE497 ABIE40_RS22540 AraC family transcriptional regulator strong 37 36
  Pseudomonas fluorescens FW300-N2C3 AO356_14825 AraC family transcriptional regulator insig. 35 37
  Rhodanobacter sp. FW510-T8 OKGIIK_01620 AraC family transcriptional regulator insig. 33 39
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05179 HTH-type transcriptional activator RhaR cofit 33 36
  Paraburkholderia graminis OAS925 ABIE53_004405 AraC-like DNA-binding protein strong 28 54
  Pseudomonas sp. DMC3 GFF4442 HTH-type transcriptional regulator CdhR insig. 27 53
  Pseudomonas putida KT2440 PP_4605 Transcriptional regulator, AraC family insig. 36 35
  Pseudomonas orientalis W4I3 QF045_RS13870 AraC family transcriptional regulator insig. 36 32
  Ralstonia solanacearum PSI07 RPSI07_RS20490 AraC family transcriptional regulator insig. 35 37
  Pseudomonas fluorescens SBW25 PFLU_RS18080 helix-turn-helix transcriptional regulator insig. 35 32
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18080 helix-turn-helix transcriptional regulator insig. 35 32
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03562 AraC family transcriptional regulator insig. 31 56
  Phocaeicola dorei CL03T12C01 ABI39_RS08240 substrate-binding domain-containing protein strong 29 35
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1629 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain insig. 27 53
  Pseudomonas sp. S08-1 OH686_08420 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain insig. 26 53
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06085 transcriptional regulator, AraC family insig. 36 37
o Pectobacterium carotovorum WPP14 HER17_RS17850 AraC family transcriptional regulator insig. 25 95
  Variovorax sp. OAS795 ABID97_RS28700 AraC family transcriptional regulator no data 40 38
  Rhizobium sp. OAE497 ABIE40_RS20540 AraC family transcriptional regulator sig. 33 36
  Phaeobacter inhibens DSM 17395 PGA1_c15870 transcriptional regulator, AraC family strong 33 34
  Dinoroseobacter shibae DFL-12 Dshi_1525 transcriptional regulator, AraC family (RefSeq) strong 31 36
  Pseudomonas orientalis W4I3 QF045_RS07130 GlxA family transcriptional regulator cofit 26 53
  Pseudomonas sp. BP01 JOY50_RS15480 helix-turn-helix domain-containing protein insig. 35 35
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1125 Transcriptional regulator, AraC family insig. 33 36
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00041 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain insig. 27 61
  Pseudomonas sp. BP01 JOY50_RS15235 GlxA family transcriptional regulator insig. 27 53
  Pseudomonas putida KT2440 PP_1313 Transcriptional regulator, AraC family strong 27 53
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_968 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain insig. 27 53
  Pseudomonas fluorescens SBW25 PFLU_RS04170 GlxA family transcriptional regulator insig. 26 53
  Pseudomonas fluorescens SBW25-INTG PFLU_RS04170 GlxA family transcriptional regulator insig. 26 53
  Sinorhizobium meliloti 1021 SM_b21649 AraC family transcriptional regulator strong 34 38
  Agrobacterium fabrum C58 Atu0410 transcriptional regulator, AraC family insig. 33 35
  Rhizobium sp. OAE497 ABIE40_RS22695 helix-turn-helix domain-containing protein strong 31 35