Homologs of GFF1592 from Variovorax sp. SCN45

Response regulator/GGDEF/EAL domain protein
SEED: Response regulator/GGDEF/EAL domain protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF1592 Response regulator/GGDEF/EAL domain protein insig. 100 100
o Alteromonas macleodii MIT1002 MIT1002_03376 Bacteriophytochrome cph2 insig. 37 95
o Azospirillum sp. SherDot2 MPMX19_05159 hypothetical protein insig. 41 96
o Shewanella sp. ANA-3 Shewana3_0868 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 34 97
o Rhodospirillum rubrum S1H Rru_A0659 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with Response Regulator Receiver modulation (NCBI) insig. 36 96
o Shewanella amazonensis SB2B Sama_0496 putative diguanylate phosphodiesterase (RefSeq) insig. 33 94
  Pseudomonas stutzeri RCH2 Psest_1163 diguanylate cyclase (GGDEF) domain strong 40 56
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 37 60
  Burkholderia phytofirmans PsJN BPHYT_RS27880 diguanylate phosphodiesterase insig. 39 56
  Dechlorosoma suillum PS Dsui_2148 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 39 58
  Shewanella sp. ANA-3 Shewana3_4029 diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) cofit 39 57
  Azospirillum sp. SherDot2 MPMX19_06128 hypothetical protein insig. 39 56
  Marinobacter adhaerens HP15 HP15_4115 sensory box/GGDEF/EAL family protein cofit 40 56
  Desulfovibrio vulgaris Miyazaki F DvMF_1544 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 39 61
  Methylophilus sp. DMC18 GFF247 hypothetical protein insig. 39 55
  Azospirillum brasilense Sp245 AZOBR_RS04390 signal peptide protein cofit 38 60
  Dechlorosoma suillum PS Dsui_3161 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein sig. 39 55
  Shewanella amazonensis SB2B Sama_2405 sensory box protein (RefSeq) insig. 38 64
  Dechlorosoma suillum PS Dsui_2160 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 40 57
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 38 61
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 40 57
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 38 55
  Synechococcus elongatus PCC 7942 Synpcc7942_1355 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 36 57
  Dechlorosoma suillum PS Dsui_0749 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 40 56
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00115 hypothetical protein cofit 39 57
  Pseudomonas simiae WCS417 PS417_28235 diguanylate cyclase insig. 39 57
  Acidovorax sp. GW101-3H11 Ac3H11_448 Sensory box/GGDEF family protein insig. 39 56
  Herbaspirillum seropedicae SmR1 HSERO_RS16570 membrane protein insig. 39 57
  Desulfovibrio vulgaris Hildenborough JW710 DVU0408 response regulator/sensory box/GGDEF domain/EAL domain protein (TIGR) sig. 38 56
  Dechlorosoma suillum PS Dsui_0262 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 40 55
  Pseudomonas fluorescens SBW25 PFLU_RS29895 EAL domain-containing protein insig. 39 57
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29895 EAL domain-containing protein insig. 39 57
  Pseudomonas aeruginosa PA14 IKLFDK_08335 Uncharacterized signaling protein PA1727 sig. 38 55
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS19820 GGDEF-domain containing protein insig. 39 56
  Ralstonia solanacearum UW163 UW163_RS19355 GGDEF-domain containing protein insig. 39 56
  Magnetospirillum magneticum AMB-1 AMB_RS09950 GGDEF domain-containing protein cofit 40 55
  Azospirillum sp. SherDot2 MPMX19_00480 hypothetical protein insig. 38 59
  Pseudomonas segetis P6 ACVTMO_RS18635 putative bifunctional diguanylate cyclase/phosphodiesterase strong 37 62
  Ralstonia solanacearum GMI1000 RS_RS22695 bifunctional diguanylate cyclase/phosphodiesterase insig. 38 56
  Variovorax sp. SCN45 GFF1448 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 38 56
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS18290 bifunctional diguanylate cyclase/phosphodiesterase insig. 38 56
  Ralstonia solanacearum UW163 UW163_RS20840 bifunctional diguanylate cyclase/phosphodiesterase insig. 38 56
  Dechlorosoma suillum PS Dsui_0506 diguanylate cyclase (GGDEF) domain-containing protein cofit 38 56
  Pseudomonas orientalis W4I3 QF045_RS02595 EAL domain-containing protein insig. 40 56
  Herbaspirillum seropedicae SmR1 HSERO_RS18020 diguanylate cyclase insig. 39 56
  Pseudomonas sp. S08-1 OH686_07355 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 35 69
  Rhodospirillum rubrum S1H Rru_A2406 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation (NCBI) insig. 40 58
  Pseudomonas syringae pv. syringae B728a Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 39 55
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 39 55
  Pseudomonas aeruginosa MRSN321 DY961_RS20305 bifunctional diguanylate cyclase/phosphodiesterase insig. 38 55
  Pseudomonas segetis P6 ACVTMO_RS15975 putative bifunctional diguanylate cyclase/phosphodiesterase sig. 37 55
  Pseudomonas aeruginosa MRSN321 DY961_RS22900 EAL domain-containing protein insig. 39 58
  Pseudomonas aeruginosa PUPa3 DQ20_RS36445 EAL domain-containing protein insig. 39 58
  Pseudomonas aeruginosa PUPa3 DQ20_RS54400 bifunctional diguanylate cyclase/phosphodiesterase cofit 38 55
  Dechlorosoma suillum PS Dsui_1011 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 36 58
  Vibrio cholerae E7946 ATCC 55056 CSW01_03465 GGDEF-domain containing protein cofit 35 59
  Shewanella loihica PV-4 Shew_0979 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 37 55
  Methylophilus sp. DMC18 GFF623 hypothetical protein insig. 34 57
  Ralstonia solanacearum PSI07 RPSI07_RS03365 GGDEF-domain containing protein insig. 39 56
  Pseudomonas sp. DMC3 GFF52 hypothetical protein insig. 39 57
  Pseudomonas aeruginosa MRSN321 DY961_RS24655 bifA;inference=COORDINATES cyclic-di-GMP phosphodiesterase BifA cofit 40 55
  Pseudomonas aeruginosa PA14 IKLFDK_02265 cyclic-di-GMP phosphodiesterase BifA sig. 40 55
  Pseudomonas aeruginosa PUPa3 DQ20_RS57105 bifA;inference=COORDINATES cyclic-di-GMP phosphodiesterase BifA cofit 40 55
  Pseudomonas putida KT2440 PP_0914 GGDEF domain protein strong 39 57
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2512 sensory box/GGDEF domain/EAL domain protein insig. 38 57
  Pseudomonas sp. SVBP6 COO64_RS22585 EAL domain-containing protein insig. 36 61
  Pseudomonas aeruginosa PA14 IKLFDK_22535 bifunctional diguanylate cyclase/phosphodiesterase insig. 39 58
  Acidovorax sp. GW101-3H11 Ac3H11_2319 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 57
  Pseudomonas fluorescens FW300-N2E3 AO353_07390 diguanylate cyclase insig. 36 61
  Marinobacter adhaerens HP15 HP15_2352 sensory box sensor/GGDEF/EAL domain protein insig. 38 55
  Pseudomonas sp. SVBP6 COO64_RS12085 bifunctional diguanylate cyclase/phosphodiesterase strong 40 56
  Dechlorosoma suillum PS Dsui_3104 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein strong 35 61
  Acidovorax sp. GW101-3H11 Ac3H11_2370 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 40 55
  Xanthobacter sp. DMC5 GFF1232 hypothetical protein insig. 38 58
  Herbaspirillum seropedicae SmR1 HSERO_RS12780 diguanylate phosphodiesterase sig. 38 56
  Cupriavidus basilensis FW507-4G11 RR42_RS22465 membrane protein insig. 36 56
  Pseudomonas syringae pv. syringae B728a Psyr_4060 diguanylate cyclase/phosphodiesterase insig. 40 56
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4060 diguanylate cyclase/phosphodiesterase insig. 40 56
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04574 hypothetical protein cofit 39 57
  Pseudomonas sp. RS175 PFR28_03484 hypothetical protein strong 37 56
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1728 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 35 59
  Pseudomonas fluorescens FW300-N2C3 AO356_05010 diguanylate cyclase strong 40 56
  Pseudomonas sp. BP01 JOY50_RS14210 bifunctional diguanylate cyclase/phosphodiesterase insig. 40 56
  Pseudomonas stutzeri RCH2 Psest_0263 PAS domain S-box/diguanylate cyclase (GGDEF) domain sig. 40 57
  Burkholderia phytofirmans PsJN BPHYT_RS03250 diguanylate cyclase insig. 39 56
  Paraburkholderia sabiae LMG 24235 QEN71_RS30355 bifunctional diguanylate cyclase/phosphodiesterase insig. 37 57
  Magnetospirillum magneticum AMB-1 AMB_RS06165 CBS domain-containing protein insig. 36 58
  Pseudomonas segetis P6 ACVTMO_RS19720 EAL domain-containing protein strong 34 61
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2852 GGDEF domain/EAL domain protein strong 40 56
  Ralstonia sp. UNC404CL21Col ABZR87_RS19215 EAL domain-containing protein cofit 37 56
  Pseudomonas fluorescens FW300-N2E3 AO353_23975 diguanylate cyclase strong 34 59
  Pseudomonas sp. S08-1 OH686_07220 c-di-GMP phosphodiesterase cofit 38 55
  Magnetospirillum magneticum AMB-1 AMB_RS13545 bifunctional diguanylate cyclase/phosphodiesterase insig. 37 55
  Magnetospirillum magneticum AMB-1 AMB_RS15005 two-component system response regulator insig. 35 63
  Pseudomonas sp. S08-1 OH686_08910 Phytochrome-like protein / Cph2 cofit 35 65
  Caulobacter crescentus NA1000 CCNA_03191 PAS-family GGDEF/EAL family protein cofit 40 56
  Caulobacter crescentus NA1000 Δfur CCNA_03191 PAS-family GGDEF/EAL family protein cofit 40 56
  Pseudomonas sp. DMC3 GFF5063 hypothetical protein cofit 39 56
  Ralstonia solanacearum PSI07 RPSI07_RS05310 PAS domain S-box protein cofit 37 56
  Dechlorosoma suillum PS Dsui_2365 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 35 58