Homologs of GFF1396 from Variovorax sp. SCN45

TRAP-type C4-dicarboxylate transport system, periplasmic component
SEED: TRAP-type C4-dicarboxylate transport system, periplasmic component

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF1396 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 100 100
o Cupriavidus basilensis FW507-4G11 RR42_RS10600 C4-dicarboxylate ABC transporter substrate-binding protein insig. 66 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01743 tripartite ATP-independent transporter solute receptor, DctP family insig. 62 100
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05542 tripartite ATP-independent transporter solute receptor, DctP family no data 56 90
o Serratia liquefaciens MT49 IAI46_00375 TRAP transporter substrate-binding protein insig. 41 90
  Bosea sp. OAE506 ABIE41_RS24145 TRAP transporter substrate-binding protein insig. 34 85
  Azospirillum sp. SherDot2 MPMX19_03529 2,3-diketo-L-gulonate-binding periplasmic protein YiaO insig. 32 73
  Xanthobacter sp. DMC5 GFF2557 Solute-binding protein insig. 29 86
  Burkholderia phytofirmans PsJN BPHYT_RS30445 ABC transporter substrate-binding protein no data 30 87
  Xanthobacter sp. DMC5 GFF4174 Sialic acid-binding periplasmic protein SiaP insig. 28 94
  Escherichia fergusonii Becca EFB2_00227 2,3-diketo-L-gulonate-binding periplasmic protein YiaO insig. 28 86
  Escherichia coli Nissle 1917 ECOLIN_RS20470 2,3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO insig. 28 86
  Escherichia coli ECOR27 NOLOHH_07820 yiaO 2,3-diketo-L-gulonate transporter substrate-binding protein YiaO insig. 28 85
  Escherichia coli ECRC62 BNILDI_03725 yiaO 2,3-diketo-L-gulonate transporter substrate-binding protein YiaO insig. 28 85
  Azospirillum brasilense Sp245 AZOBR_RS26640 ABC transporter substrate-binding protein insig. 30 71
  Pectobacterium carotovorum WPP14 HER17_RS19675 TRAP transporter substrate-binding protein insig. 30 71
  Escherichia coli ECOR38 HEPCGN_14765 yiaO 2,3-diketo-L-gulonate transporter substrate-binding protein YiaO insig. 27 86
  Pseudomonas sp. RS175 PFR28_02438 Solute-binding protein strong 30 81
  Acidovorax sp. GW101-3H11 Ac3H11_1227 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 29 85
  Sinorhizobium meliloti 1021 SM_b20036 ABC transporter substrate-binding protein insig. 28 82
  Pseudomonas segetis P6 ACVTMO_RS11805 TRAP transporter substrate-binding protein cofit 28 76
  Escherichia coli BL21 ECD_03431 2,3-diketo-L-gulonate-binding periplasmic protein insig. 27 86
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00125 2,3-diketo-L-gulonate-binding periplasmic protein YiaO insig. 27 86
  Escherichia coli BW25113 b3579 yiaO predicted transporter (NCBI) insig. 27 86
  Pseudomonas orientalis W4I3 QF045_RS19030 TRAP transporter substrate-binding protein cofit 30 90
  Herbaspirillum seropedicae SmR1 HSERO_RS19065 ABC transporter substrate-binding protein insig. 31 95
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2093 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 29 93
  Ralstonia sp. UNC404CL21Col ABZR87_RS21090 TRAP transporter substrate-binding protein insig. 29 87
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03768 Solute-binding protein cofit 32 72
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF430 2,3-diketo-L-gulonate-binding periplasmic protein yiaO precursor insig. 27 86
  Pseudomonas stutzeri RCH2 Psest_2125 D-gluconate TRAP transporter, periplasmic component (from data) strong 28 87
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5231 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 29 72
  Burkholderia phytofirmans PsJN BPHYT_RS24175 C4-dicarboxylate ABC transporter insig. 28 98
  Sinorhizobium meliloti 1021 SM_b21438 C4-dicarboxylate transport system, C4-dicarboxylate-binding protein precursor signal peptide insig. 30 85
  Variovorax sp. OAS795 ABID97_RS19625 TRAP transporter substrate-binding protein insig. 28 81
  Azospirillum brasilense Sp245 AZOBR_RS31400 C4-dicarboxylate ABC transporter insig. 32 69
  Escherichia coli ECRC62 BNILDI_07130 Bacterial extracellular solute-binding protein, family 7 insig. 28 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05324 tripartite ATP-independent transporter solute receptor, DctP family insig. 27 98
  Variovorax sp. SCN45 GFF1453 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 28 94
  Pseudomonas segetis P6 ACVTMO_RS20175 TRAP transporter substrate-binding protein insig. 28 73
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16465 TRAP transporter substrate-binding protein cofit 29 74
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03359 tripartite ATP-independent transporter solute receptor, DctP family insig. 28 95
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_487 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 29 81
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2987 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 27 90
  Azospirillum brasilense Sp245 AZOBR_RS26435 ABC transporter substrate-binding protein insig. 31 78
  Variovorax sp. OAS795 ABID97_RS11785 TRAP transporter substrate-binding protein insig. 30 76
  Variovorax sp. SCN45 GFF6468 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein insig. 29 82
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03838 Solute-binding protein insig. 28 95
  Paraburkholderia graminis OAS925 ABIE53_006502 tripartite ATP-independent transporter DctP family solute receptor sig. 27 98
  Pseudomonas fluorescens SBW25 PFLU_RS19295 TRAP transporter substrate-binding protein insig. 32 72
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19295 TRAP transporter substrate-binding protein insig. 32 72
  Azospirillum brasilense Sp245 AZOBR_RS30130 C4-dicarboxylate ABC transporter insig. 31 67
  Pantoea sp. MT58 IAI47_03230 TRAP transporter substrate-binding protein insig. 29 74
  Variovorax sp. SCN45 GFF5682 TRAP-type transport system, periplasmic component insig. 30 75
  Enterobacter sp. TBS_079 MPMX20_04349 Solute-binding protein insig. 28 73
  Azospirillum sp. SherDot2 MPMX19_04770 Sialic acid-binding periplasmic protein SiaP insig. 32 74
  Pseudomonas simiae WCS417 PS417_17370 C4-dicarboxylate ABC transporter insig. 31 78
  Xanthobacter sp. DMC5 GFF2851 2,3-diketo-L-gulonate-binding periplasmic protein YiaO insig. 27 94
  Pseudomonas putida KT2440 PP_1169 D-glucuronate / D-galacturonate TRAP transporter, solute receptor component (from data) strong 28 73
  Acidovorax sp. GW101-3H11 Ac3H11_3226 gluconate TRAP transporter, periplasmic solute-binding component (from data) strong 28 76
  Sinorhizobium meliloti 1021 SM_b20442 substrate-binding protein insig. 28 80
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1783 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein insig. 26 88
  Pseudomonas sp. BP01 JOY50_RS02035 TRAP transporter substrate-binding protein insig. 27 81
  Acidovorax sp. GW101-3H11 Ac3H11_3957 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 29 71
  Azospirillum sp. SherDot2 MPMX19_03904 Sialic acid-binding periplasmic protein SiaP insig. 32 73
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5015 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 28 84
  Rahnella sp. WP5 EX31_RS08010 TRAP transporter substrate-binding protein insig. 28 71
  Pseudomonas fluorescens FW300-N2C3 AO356_23055 C4-dicarboxylate ABC transporter insig. 29 81
  Herbaspirillum seropedicae SmR1 HSERO_RS05560 ABC transporter substrate-binding protein insig. 26 87
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03761 tripartite ATP-independent transporter solute receptor, DctP family insig. 30 78
  Acidovorax sp. GW101-3H11 Ac3H11_3524 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 29 86
  Azospirillum sp. SherDot2 MPMX19_04764 Solute-binding protein insig. 27 74
  Burkholderia phytofirmans PsJN BPHYT_RS35760 ABC transporter substrate-binding protein insig. 30 79
  Pseudomonas sp. BP01 JOY50_RS04225 TRAP transporter substrate-binding protein no data 29 70
  Azospirillum sp. SherDot2 MPMX19_06061 Solute-binding protein insig. 28 99
  Bosea sp. OAE506 ABIE41_RS18675 TRAP transporter substrate-binding protein insig. 28 95
  Sinorhizobium meliloti 1021 SMc00265 periplasmic binding protein insig. 29 75
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5505 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein insig. 29 76
  Rhodopseudomonas palustris CGA009 TX73_014410 TRAP transporter substrate-binding protein insig. 28 77
  Cupriavidus basilensis FW507-4G11 RR42_RS35000 ABC transporter substrate-binding protein insig. 28 88
  Paraburkholderia graminis OAS925 ABIE53_005305 tripartite ATP-independent transporter DctP family solute receptor insig. 30 76
  Pseudomonas syringae pv. syringae B728a Psyr_0900 TRAP dicarboxylate transporter- DctP subunit insig. 29 73
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0900 TRAP dicarboxylate transporter- DctP subunit insig. 29 73
  Azospirillum brasilense Sp245 AZOBR_RS15915 gluconate TRAP transporter, periplasmic solute-binding component (from data) strong 29 74
  Agrobacterium fabrum C58 Atu4826 ABC transporter substrate binding protein insig. 31 70
  Variovorax sp. SCN45 GFF1519 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 29 76
  Bosea sp. OAE506 ABIE41_RS23675 sialic acid TRAP transporter substrate-binding protein SiaP insig. 28 79
  Variovorax sp. SCN45 GFF2918 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 29 89
  Azospirillum sp. SherDot2 MPMX19_05866 hypothetical protein insig. 29 73
  Pseudomonas sp. DMC3 GFF1616 Solute-binding protein cofit 28 84
  Xanthobacter sp. DMC5 GFF29 2,3-diketo-L-gulonate-binding periplasmic protein YiaO insig. 27 88
  Castellaniella sp019104865 MT123 ABCV34_RS11540 TRAP transporter substrate-binding protein insig. 29 72
  Acidovorax sp. GW101-3H11 Ac3H11_161 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein insig. 29 69
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3629 tripartite ATP-independent periplasmic transporter solute receptor, DctP family insig. 27 81
  Azospirillum sp. SherDot2 MPMX19_05801 Solute-binding protein insig. 31 67
  Pseudomonas sp. RS175 PFR28_01614 hypothetical protein insig. 29 74
  Pseudomonas stutzeri RCH2 Psest_0363 tripartite ATP-independent periplasmic transporter solute receptor, DctP family insig. 27 70
  Desulfovibrio vulgaris Hildenborough JW710 DVU2822 TRAP dicarboxylate family transporter (TIGR) insig. 27 86
  Bosea sp. OAE506 ABIE41_RS20755 TRAP transporter substrate-binding protein insig. 30 77
  Herbaspirillum seropedicae SmR1 HSERO_RS02540 ABC transporter substrate-binding protein insig. 29 62