Homologs of ECD_03111 from Escherichia coli BL21

targeting factor for csrBC sRNA degradation
SEED: RNase E specificity factor CsrD

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Escherichia coli BL21 ECD_03111 targeting factor for csrBC sRNA degradation cofit 100 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00453 RNase E specificity factor CsrD cofit 100 100
o Escherichia coli BW25113 b3252 yhdA conserved inner membrane protein (NCBI) sig. 100 100
o Escherichia coli ECOR27 NOLOHH_09505 csrD RNase E specificity factor CsrD sig. 100 100
o Escherichia coli ECRC62 BNILDI_02015 csrD RNase E specificity factor CsrD cofit 100 100
o Escherichia coli ECRC100 OKFHMN_17720 csrD RNase E specificity factor CsrD cofit 100 100
o Escherichia coli ECRC101 MCAODC_08240 csrD RNase E specificity factor CsrD cofit 100 100
o Escherichia coli ECRC102 NIAGMN_15480 csrD RNase E specificity factor CsrD cofit 100 100
o Escherichia coli ECRC98 JDDGAC_21345 csrD RNase E specificity factor CsrD cofit 100 100
o Escherichia coli ECRC99 KEDOAH_10430 csrD RNase E specificity factor CsrD no data 100 100
o Escherichia coli ECOR38 HEPCGN_16585 csrD RNase E specificity factor CsrD cofit 99 100
o Escherichia fergusonii Becca EFB2_00579 RNase E specificity factor CsrD insig. 98 100
o Escherichia coli Nissle 1917 ECOLIN_RS18635 RNase E specificity factor CsrD cofit 98 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2133 RNase E specificity factor CsrD strong 84 100
o Enterobacter sp. TBS_079 MPMX20_04158 RNase E specificity factor CsrD strong 77 100
o Enterobacter asburiae PDN3 EX28DRAFT_3302 diguanylate cyclase (GGDEF) domain cofit 77 100
o Klebsiella michiganensis M5al BWI76_RS25505 RNase E specificity factor CsrD strong 75 100
o Klebsiella pneumoniae MKP103 KDGMDA_06280 Lipoprotein strong 74 100
o Klebsiella pneumoniae MRSN742743 GJGHJB_00456 csrD RNase E specificity factor CsrD strong 74 100
o Serratia liquefaciens MT49 IAI46_22725 RNase E specificity factor CsrD cofit 56 100
o Erwinia amylovora T8 OLJFJH_06905 RNase E specificity factor CsrD strong 54 96
o Pectobacterium carotovorum WPP14 HER17_RS20175 RNase E specificity factor CsrD insig. 54 100
o Dickeya dianthicola 67-19 HGI48_RS01345 RNase E specificity factor CsrD cofit 53 100
o Dickeya dianthicola ME23 DZA65_RS01405 RNase E specificity factor CsrD sig. 53 100
o Dickeya dadantii 3937 DDA3937_RS01425 RNase E specificity factor CsrD cofit 53 100
o Erwinia tracheiphila SCR3 LU632_RS21455 csrD RNase E specificity factor CsrD insig. 51 100
o Pantoea sp. MT58 IAI47_02430 RNase E specificity factor CsrD insig. 54 100
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_13555 csrD RNase E specificity factor CsrD cofit 51 100
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS02445 csrD RNase E specificity factor CsrD cofit 54 100
o Rahnella sp. WP5 EX31_RS12230 RNase E specificity factor CsrD insig. 50 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_02100 RNase E specificity factor CsrD cofit 34 98
  Shewanella oneidensis MR-1 SO4116 mshH MSHA biogenesis protein MshH (NCBI ptt file) strong 29 97
  Shewanella loihica PV-4 Shew_0384 regulatory protein CsrD (RefSeq) strong 30 98
  Shewanella sp. ANA-3 Shewana3_3668 regulatory protein CsrD (RefSeq) sig. 28 98
  Shewanella amazonensis SB2B Sama_0449 regulatory protein CsrD (RefSeq) sig. 29 97
  Marinobacter adhaerens HP15 HP15_3218 diguanylate cyclase/phosphodiesterase insig. 25 82
  Shewanella sp. ANA-3 Shewana3_2167 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 24 66
  Shewanella oneidensis MR-1 SO2507 GGDEF domain protein (NCBI ptt file) insig. 24 71
  Shewanella amazonensis SB2B Sama_1829 putative diguanylate phosphodiesterase (RefSeq) insig. 23 68
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1802 Membrane bound c-di-GMP receptor LapD insig. 23 97
  Pseudomonas sp. DMC3 GFF4286 hypothetical protein cofit 22 82
  Pseudomonas fluorescens FW300-N2E3 AO353_11170 hypothetical protein strong 22 96
  Shewanella loihica PV-4 Shew_2065 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 24 65
  Pseudomonas fluorescens FW300-N2C3 AO356_10580 hypothetical protein cofit 23 80
  Acidovorax sp. GW101-3H11 Ac3H11_2106 Membrane bound c-di-GMP receptor LapD cofit 26 64
  Pseudomonas fluorescens GW456-L13 PfGW456L13_546 Membrane bound c-di-GMP receptor LapD insig. 22 68
  Pseudomonas sp. SVBP6 COO64_RS26435 lapD cyclic di-GMP receptor LapD cofit 22 81
  Pseudomonas sp. S08-1 OH686_20650 Membrane bound c-di-GMP receptor LapD insig. 23 68
  Pseudomonas segetis P6 ACVTMO_RS14575 lapD cyclic di-GMP receptor LapD insig. 23 68
  Pseudomonas protegens RBAN4 FABNJH_00690 Diguanylate cyclase/phosphodiesterase insig. 22 97
  Pseudomonas orientalis W4I3 QF045_RS03595 EAL domain-containing protein cofit 22 68
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00514 RNase E specificity factor CsrD cofit 21 97
  Pectobacterium carotovorum WPP14 HER17_RS05880 EAL domain-containing protein cofit 22 98
  Pseudomonas sp. RS175 PFR28_04783 hypothetical protein strong 22 80
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3983 Membrane bound c-di-GMP receptor LapD strong 22 80
  Acidovorax sp. GW101-3H11 Ac3H11_903 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 24 62
  Shewanella sp. ANA-3 Shewana3_0620 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 24 67
  Marinobacter adhaerens HP15 HP15_68 sensory box/FOG: EAL domain/GGDEF domain containing protein insig. 23 67
  Pseudomonas stutzeri RCH2 Psest_1864 diguanylate cyclase (GGDEF) domain insig. 22 69
  Pseudomonas sp. BP01 JOY50_RS28180 lapD cyclic di-GMP receptor LapD no data 21 68
  Pseudomonas putida KT2440 PP_0165 GGDEF domain protein strong 21 68
  Shewanella oneidensis MR-1 SO0628 GGDEF domain protein (NCBI ptt file) insig. 24 67
  Acidovorax sp. GW101-3H11 Ac3H11_4486 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 23 67
  Methylophilus sp. DMC18 GFF82 hypothetical protein cofit 23 65
  Pseudomonas aeruginosa MRSN321 PFGADD_03945 diguanylate cyclase sig. 26 64
  Pseudomonas aeruginosa PA14 IKLFDK_05475 diguanylate cyclase insig. 26 64
  Pseudomonas aeruginosa PUPa3 NPBIFN_03996 diguanylate cyclase cofit 26 64
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3529 Membrane bound c-di-GMP receptor LapD insig. 23 65
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15525 GGDEF and EAL domain-containing protein insig. 23 63
  Alteromonas macleodii MIT1002 MIT1002_01618 Cyclic di-GMP phosphodiesterase Gmr insig. 21 80
  Ralstonia solanacearum PSI07 RPSI07_RS15375 GGDEF-domain containing protein insig. 25 65
  Pseudomonas stutzeri RCH2 Psest_0263 PAS domain S-box/diguanylate cyclase (GGDEF) domain sig. 23 67
  Marinobacter adhaerens HP15 HP15_806 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 23 64
  Herbaspirillum seropedicae SmR1 HSERO_RS13550 diguanylate phosphodiesterase insig. 24 68
  Magnetospirillum magneticum AMB-1 AMB_RS23535 PAS domain S-box protein cofit 23 63
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 22 69
  Dechlorosoma suillum PS Dsui_1501 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 24 67
  Pseudomonas sp. S08-1 OH686_21075 Sensory box/GGDEF family protein insig. 25 64
  Ralstonia solanacearum GMI1000 RS_RS07755 GGDEF-domain containing protein insig. 24 65
  Paraburkholderia sabiae LMG 24235 QEN71_RS30355 bifunctional diguanylate cyclase/phosphodiesterase insig. 22 69
  Bosea sp. OAE506 ABIE41_RS19250 EAL domain-containing protein insig. 22 65
  Pseudomonas fluorescens FW300-N2E3 AO353_18415 hypothetical protein insig. 21 68
  Shewanella amazonensis SB2B Sama_2973 GGDEF domain-containing protein (RefSeq) insig. 24 67
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1842.1 Mlr3171 protein insig. 24 70
  Pseudomonas sp. BP01 JOY50_RS25465 bifunctional diguanylate cyclase/phosphodiesterase insig. 23 65
  Shewanella amazonensis SB2B Sama_0388 putative diguanylate phosphodiesterase (RefSeq) strong 23 65
  Pseudomonas aeruginosa MRSN321 PFGADD_03794 lapD cyclic di-GMP receptor LapD insig. 24 65
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4428 Membrane bound c-di-GMP receptor LapD insig. 23 64
  Pseudomonas sp. FW215-L2 GFF1266 Cyclic di-GMP phosphodiesterase Gmr insig. 22 63
  Marinobacter adhaerens HP15 HP15_3980 diguanylate cyclase/phosphodiesterase insig. 25 63
  Dechlorosoma suillum PS Dsui_2032 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 21 64
  Marinobacter adhaerens HP15 HP15_4050 sensory box/GGDEF family protein cofit 21 64
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3860 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 23 63
  Acidovorax sp. GW101-3H11 Ac3H11_2498 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) strong 23 67
  Pseudomonas aeruginosa PA14 IKLFDK_06810 Diguanylate cyclase/phosphodiesterase insig. 24 65
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS18005 GGDEF and EAL domain-containing protein insig. 21 63
  Pseudomonas putida KT2440 PP_2258 Sensory box protein insig. 23 65
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS09440 pdeR cyclic di-GMP phosphodiesterase cofit 22 64
  Pseudomonas aeruginosa PUPa3 NPBIFN_03835 lapD cyclic di-GMP receptor LapD insig. 24 65
  Pseudomonas aeruginosa MRSN321 PFGADD_05195 fimX cyclic di-GMP-binding protein FimX strong 24 66
  Pseudomonas aeruginosa PA14 IKLFDK_28745 cyclic di-GMP-binding protein FimX strong 24 66
  Pseudomonas sp. S08-1 OH686_11905 hypothetical protein insig. 25 63
  Pseudomonas aeruginosa PUPa3 NPBIFN_05271 fimX cyclic di-GMP-binding protein FimX strong 24 66
  Ralstonia solanacearum GMI1000 RS_RS02945 PAS domain S-box protein insig. 23 67
  Dechlorosoma suillum PS Dsui_0760 diguanylate cyclase (GGDEF) domain-containing protein cofit 22 62
  Acidovorax sp. GW101-3H11 Ac3H11_2715 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 22 67
  Shewanella oneidensis MR-1 SO0437 sensory box protein (NCBI ptt file) strong 21 74
  Pseudomonas protegens RBAN4 FABNJH_09880 GGDEF domain-containing protein insig. 23 63
  Shewanella loihica PV-4 Shew_0979 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 19 63
  Bosea sp. OAE506 ABIE41_RS10320 EAL domain-containing protein insig. 24 70
  Alteromonas macleodii MIT1002 MIT1002_01322 Cyclic di-GMP phosphodiesterase Gmr insig. 24 76
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2329 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) strong 22 63
  Pantoea sp. MT58 IAI47_09305 cyclic di-GMP phosphodiesterase strong 21 64
  Klebsiella michiganensis M5al BWI76_RS18710 GGDEF-domain containing protein strong 23 67
  Acidovorax sp. GW101-3H11 Ac3H11_2258 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 22 66
  Methylophilus sp. DMC18 GFF887 hypothetical protein cofit 22 77
  Magnetospirillum magneticum AMB-1 AMB_RS06165 CBS domain-containing protein insig. 22 64
  Pseudomonas fluorescens GW456-L13 PfGW456L13_490 GGDEF domain protein insig. 24 64
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16935 bifunctional diguanylate cyclase/phosphodiesterase strong 23 73
  Rhodanobacter sp. FW510-T8 OKGIIK_07905 Diguanylate cyclase insig. 23 73
  Dechlorosoma suillum PS Dsui_2160 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 22 63
  Shewanella oneidensis MR-1 SO0427 sensory box protein (NCBI ptt file) sig. 21 67
  Pseudomonas orientalis W4I3 QF045_RS02015 bifunctional diguanylate cyclase/phosphodiesterase cofit 24 69
  Rhodanobacter denitrificans MT42 LRK55_RS16650 EAL domain-containing protein strong 23 73
  Alteromonas macleodii MIT1002 MIT1002_00433 Cyclic di-GMP phosphodiesterase Gmr insig. 21 78
  Acidovorax sp. GW101-3H11 Ac3H11_2218 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 23 62
  Paraburkholderia sabiae LMG 24235 QEN71_RS10745 EAL domain-containing protein insig. 23 77
  Ralstonia solanacearum PSI07 RPSI07_RS21070 PAS domain S-box protein insig. 23 67
  Shewanella sp. ANA-3 Shewana3_0436 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) strong 22 68
  Shewanella sp. ANA-3 Shewana3_0429 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 21 66
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09090 GGDEF and EAL domain-containing protein insig. 21 63
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4666 Sensory box/GGDEF family protein insig. 23 68
  Rhodanobacter denitrificans MT42 LRK55_RS08620 GGDEF and EAL domain-containing protein insig. 21 63
  Pseudomonas fluorescens FW300-N2E3 AO353_09115 diguanylate cyclase strong 23 69
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS12010 bifunctional diguanylate cyclase/phosphodiesterase insig. 23 75
  Azospirillum sp. SherDot2 MPMX19_02228 hypothetical protein insig. 23 65
  Ralstonia sp. UNC404CL21Col ABZR87_RS08150 EAL domain-containing protein insig. 22 67
  Alteromonas macleodii MIT1002 MIT1002_01199 Bacteriophytochrome cph2 insig. 21 68
  Pseudomonas stutzeri RCH2 Psest_3777 diguanylate cyclase (GGDEF) domain sig. 23 71
  Pseudomonas protegens RBAN4 FABNJH_17030 GGDEF domain-containing response regulator insig. 22 68
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS12250 diguanylate cyclase insig. 23 67
  Ralstonia solanacearum UW163 UW163_RS01355 diguanylate cyclase insig. 23 67
  Alteromonas macleodii MIT1002 MIT1002_00062 Bacteriophytochrome cph2 insig. 22 67
  Pseudomonas fluorescens SBW25 PFLU_RS28055 EAL domain-containing protein insig. 22 74
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28055 EAL domain-containing protein sig. 22 74
  Pseudomonas syringae pv. syringae B728a Psyr_1159 PAS:GGDEF insig. 22 65
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1159 PAS:GGDEF insig. 22 65
  Methylophilus sp. DMC18 GFF1786 hypothetical protein insig. 21 65
  Pseudomonas aeruginosa PUPa3 NPBIFN_00290 Cyclic di-GMP phosphodiesterase Gmr strong 21 64
  Pseudomonas putida KT2440 PP_5263 GGDEF domain protein sig. 25 69
  Cupriavidus basilensis FW507-4G11 RR42_RS03995 diguanylate cyclase insig. 24 64
  Shewanella sp. ANA-3 Shewana3_2308 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 21 69
  Herbaspirillum seropedicae SmR1 HSERO_RS01295 deoxyuridine 5'-triphosphate nucleotidohydrolase strong 23 68
  Shewanella sp. ANA-3 Shewana3_1464 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 22 66
  Dechlorosoma suillum PS Dsui_3167 diguanylate cyclase (GGDEF) domain-containing protein cofit 21 68
  Pseudomonas syringae pv. syringae B728a Psyr_4493 PAS:GGDEF insig. 21 63
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4493 PAS:GGDEF cofit 21 63
  Shewanella loihica PV-4 Shew_3125 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 22 63
  Pseudomonas sp. FW215-L2 GFF4526 putative signaling protein sig. 23 69
  Pseudomonas sp. RS175 PFR28_04179 Sensor histidine kinase RcsC sig. 23 69
  Synechococcus elongatus PCC 7942 Synpcc7942_1716 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) strong 22 65
  Desulfovibrio vulgaris Miyazaki F DvMF_0211 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) sig. 22 67
  Pseudomonas aeruginosa MRSN321 PFGADD_00286 Cyclic di-GMP phosphodiesterase Gmr strong 22 64
  Pseudomonas aeruginosa PA14 IKLFDK_24035 GGDEF domain-containing protein insig. 22 64
  Methylophilus sp. DMC18 GFF2168 hypothetical protein insig. 20 80
  Cupriavidus basilensis FW507-4G11 RR42_RS30550 intracellular signaling protein insig. 24 63
  Collimonas humicola GW821-FHT01A05 MPMX01_03635 hypothetical protein insig. 23 64
  Pseudomonas sp. SVBP6 COO64_RS09675 bifunctional diguanylate cyclase/phosphodiesterase insig. 23 64
  Shewanella oneidensis MR-1 SO2216 sensory box protein (NCBI ptt file) insig. 22 64
  Pseudomonas protegens RBAN4 FABNJH_29130 Two-component system response regulator insig. 21 70
  Shewanella amazonensis SB2B Sama_2164 sensory box protein (RefSeq) strong 23 64
  Pseudomonas protegens RBAN4 FABNJH_30415 Bifunctional diguanylate cyclase/phosphodiesterase insig. 22 69
  Acidovorax sp. GW101-3H11 Ac3H11_2446 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 24 65
  Pseudomonas segetis P6 ACVTMO_RS22595 putative bifunctional diguanylate cyclase/phosphodiesterase sig. 23 69
  Pseudomonas syringae pv. syringae B728a Psyr_3843 diguanylate cyclase/phosphodiesterase insig. 23 67
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3843 diguanylate cyclase/phosphodiesterase insig. 23 67
  Rhodopseudomonas palustris CGA009 TX73_002030 EAL domain-containing protein insig. 23 63
  Pseudomonas sp. S08-1 OH686_09550 PAS/PAC domain insig. 23 66
  Alteromonas macleodii MIT1002 MIT1002_01559 Cyclic di-GMP phosphodiesterase YfgF insig. 22 69
  Rhodanobacter sp. FW510-T8 OKGIIK_15575 Diguanylate cyclase insig. 22 63
  Pseudomonas putida KT2440 PP_1761 diguanylate cyclase with phosphodiesterase domain strong 25 62
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05407 putative signaling protein cofit 22 74
  Phaeobacter inhibens DSM 17395 PGA1_c31770 putative signaling protein with diguanylate cyclase/phosphodiesterase activity insig. 21 89
  Shewanella loihica PV-4 Shew_3227 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 20 64
  Shewanella amazonensis SB2B Sama_0378 sensory box protein (RefSeq) sig. 21 65
  Pseudomonas sp. DMC3 GFF149 Sensor histidine kinase RcsC cofit 23 68
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05668 putative signaling protein sig. 22 70
  Pseudomonas sp. S08-1 OH686_07355 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 21 63
  Azospirillum sp. SherDot2 MPMX19_04839 hypothetical protein insig. 21 66
  Pseudomonas segetis P6 ACVTMO_RS20680 EAL domain-containing response regulator sig. 24 64
  Pseudomonas fluorescens FW300-N2E3 AO353_27105 diguanylate cyclase insig. 22 65
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1071 Sensory box/GGDEF family protein insig. 24 64
  Pseudomonas aeruginosa MRSN321 PFGADD_05546 Bifunctional diguanylate cyclase/phosphodiesterase insig. 23 69
  Pseudomonas aeruginosa PA14 IKLFDK_26975 GGDEF-domain containing protein insig. 23 69
  Pseudomonas aeruginosa PUPa3 NPBIFN_05622 Bifunctional diguanylate cyclase/phosphodiesterase sig. 23 69
  Shewanella loihica PV-4 Shew_0307 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 21 73
  Acidovorax sp. GW101-3H11 Ac3H11_4120 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 24 64
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4399 GGDEF domain/EAL domain protein strong 23 69
  Azospirillum brasilense Sp245 AZOBR_RS13885 diguanylate cyclase insig. 25 64
  Pseudomonas stutzeri RCH2 Psest_0491 PAS domain S-box/diguanylate cyclase (GGDEF) domain strong 25 65
  Pseudomonas sp. RS175 PFR28_04391 hypothetical protein insig. 24 69
  Pseudomonas fluorescens FW300-N2E3 AO353_07885 diguanylate cyclase strong 23 68
  Pseudomonas fluorescens FW300-N2E3 AO353_00695 diguanylate cyclase strong 21 63
  Shewanella oneidensis MR-1 SO3084 sensory box protein (NCBI ptt file) sig. 21 66
  Vibrio cholerae E7946 ATCC 55056 CSW01_03440 bifunctional diguanylate cyclase/phosphodiesterase insig. 19 66
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2152 GGDEF domain/EAL domain protein no data 24 69
  Pseudomonas orientalis W4I3 QF045_RS00790 EAL domain-containing protein cofit 23 70
  Rhizobium sp. OAE497 ABIE40_RS16745 EAL domain-containing protein insig. 22 64
  Pseudomonas sp. S08-1 OH686_08910 Phytochrome-like protein / Cph2 cofit 21 71
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS02050 GGDEF-domain containing protein insig. 24 65
  Ralstonia solanacearum UW163 UW163_RS15375 GGDEF-domain containing protein insig. 24 65
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS11270 putative bifunctional diguanylate cyclase/phosphodiesterase cofit 24 63
  Rhizobium sp. OAE497 ABIE40_RS26645 EAL domain-containing protein insig. 22 64
  Kangiella aquimarina DSM 16071 B158DRAFT_0509 diguanylate cyclase (GGDEF) domain strong 21 64
  Xanthobacter sp. DMC5 GFF425 Oxygen sensor protein DosP insig. 23 63
  Pseudomonas fluorescens FW300-N2E3 AO353_17145 diguanylate phosphodiesterase insig. 22 67
  Pseudomonas sp. S08-1 OH686_13725 Sensory box/GGDEF family protein cofit 22 71
  Pseudomonas simiae WCS417 PS417_26405 diguanylate cyclase insig. 22 70
  Pseudomonas fluorescens SBW25 PFLU_RS29340 bifunctional diguanylate cyclase/phosphodiesterase insig. 22 69
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29340 bifunctional diguanylate cyclase/phosphodiesterase strong 22 69
  Pseudomonas syringae pv. syringae B728a Psyr_2432 diguanylate cyclase/phosphodiesterase insig. 22 66
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2432 diguanylate cyclase/phosphodiesterase insig. 22 66
  Marinobacter adhaerens HP15 HP15_3533 response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 21 68
  Acidovorax sp. GW101-3H11 Ac3H11_1143 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 23 65
  Shewanella sp. ANA-3 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 22 64
  Pseudomonas fluorescens FW300-N2C3 AO356_12660 diguanylate cyclase sig. 23 67
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07185 EAL domain-containing protein cofit 23 81
  Shewanella sp. ANA-3 Shewana3_2929 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 23 66
  Castellaniella sp019104865 MT123 ABCV34_RS14090 EAL domain-containing protein insig. 23 63
  Dechlorosoma suillum PS Dsui_2365 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 22 65
  Agrobacterium fabrum C58 Atu2228 GGDEF family protein insig. 22 64
  Pseudomonas syringae pv. syringae B728a Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 22 69
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 22 69
  Methylophilus sp. DMC18 GFF1518 hypothetical protein cofit 21 67
  Marinobacter adhaerens HP15 HP15_1500 sensory box/GGDEF family protein insig. 21 63
  Pseudomonas sp. DMC3 GFF4687 hypothetical protein cofit 23 62
  Klebsiella pneumoniae MRSN742743 GJGHJB_01421 eAL Diguanylate cyclase/cyclic diguanylate phosphodiesterase insig. 23 38
  Sinorhizobium meliloti 1021 SMc00038 hypothetical protein insig. 22 72
  Pseudomonas fluorescens FW300-N2E3 AO353_16180 diguanylate cyclase strong 21 67
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2405 Sensory box/GGDEF family protein insig. 23 63
  Klebsiella pneumoniae MKP103 KDGMDA_27405 Anti-FlhC(2)FlhD(4) factor YdiV insig. 23 38
  Magnetospirillum magneticum AMB-1 AMB_RS03740 signal transduction protein insig. 21 68
  Pseudomonas aeruginosa PA14 IKLFDK_22535 bifunctional diguanylate cyclase/phosphodiesterase insig. 21 67
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2728 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) cofit 21 65
  Rahnella sp. WP5 EX31_RS22670 sensor domain-containing phosphodiesterase insig. 24 34
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 22 64
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS03520 putative bifunctional diguanylate cyclase/phosphodiesterase cofit 21 67
  Dechlorosoma suillum PS Dsui_1565 diguanylate cyclase (GGDEF) domain-containing protein cofit 21 66
  Agrobacterium fabrum C58 Atu4628 diguanylate cyclase insig. 20 69
  Shewanella loihica PV-4 Shew_3428 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 20 65