Homologs of DZA65_RS11990 from Dickeya dianthicola ME23

tyrosine-type recombinase/integrase
SEED: FIG00613045: hypothetical protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Dickeya dianthicola ME23 DZA65_RS11990 tyrosine-type recombinase/integrase insig. 100 100
  Dickeya dianthicola ME23 DZA65_RS23005 site-specific tyrosine recombinase XerC insig. 82 81
  Dickeya dianthicola ME23 DZA65_RS12035 site-specific tyrosine recombinase XerC no data 83 79
  Dickeya dianthicola ME23 DZA65_RS12070 site-specific tyrosine recombinase XerC no data 83 79
  Ralstonia solanacearum UW163 UW163_RS23220 recombinase XerC insig. 51 65
  Ralstonia solanacearum GMI1000 RS_RS17610 recombinase XerC insig. 55 59
  Dickeya dianthicola ME23 DZA65_RS23005 site-specific tyrosine recombinase XerC insig. 95 29
  Ralstonia solanacearum GMI1000 RS_RS12755 tyrosine recombinase XerD no data 41 57
  Ralstonia solanacearum PSI07 RPSI07_RS12160 site-specific tyrosine recombinase XerD insig. 40 59
  Castellaniella sp019104865 MT123 ABCV34_RS00515 site-specific tyrosine recombinase XerD insig. 40 61
  Paraburkholderia graminis OAS925 ABIE53_003361 integrase/recombinase XerD strong 39 62
  Cupriavidus basilensis FW507-4G11 RR42_RS03345 recombinase XerD sig. 38 62
  Rhodanobacter sp. FW510-T8 OKGIIK_11520 xerD site-specific tyrosine recombinase XerD insig. 39 70
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04126 integrase/recombinase XerD no data 38 62
  Rhodanobacter denitrificans MT42 LRK55_RS04515 site-specific tyrosine recombinase XerD strong 38 70
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS04735 site-specific tyrosine recombinase XerD insig. 38 70
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS19225 site-specific tyrosine recombinase XerD strong 42 62
  Burkholderia phytofirmans PsJN BPHYT_RS15950 tyrosine recombinase XerD sig. 37 62
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS05140 site-specific tyrosine recombinase XerD insig. 39 62
  Ralstonia solanacearum UW163 UW163_RS08485 site-specific tyrosine recombinase XerD insig. 39 62
  Marinobacter adhaerens HP15 HP15_762 site-specific tyrosine recombinase XerD insig. 40 57
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3011 Tyrosine recombinase XerD insig. 40 62
  Pseudomonas sp. S08-1 OH686_17750 tyrosine recombinase XerD insig. 39 62
  Pseudomonas simiae WCS417 PS417_22895 tyrosine recombinase XerD strong 40 62
  Pseudomonas fluorescens FW300-N2C3 AO356_06385 recombinase XerD strong 40 62
  Paraburkholderia sabiae LMG 24235 QEN71_RS02755 site-specific tyrosine recombinase XerD no data 37 62
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3145 Tyrosine recombinase XerD no data 40 62
  Pseudomonas sp. RS175 PFR28_00331 Tyrosine recombinase XerD strong 40 62
  Pseudomonas fluorescens SBW25 PFLU_RS24560 site-specific tyrosine recombinase XerD sig. 41 59
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24560 site-specific tyrosine recombinase XerD strong 41 59
  Pseudomonas fluorescens FW300-N2E3 AO353_04365 recombinase XerD strong 40 62
  Desulfovibrio vulgaris Hildenborough JW710 DVU1654 xerD site-specific recombinase, phage integrase family (TIGR) sig. 38 61
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1721 Tyrosine recombinase XerD strong 40 62
  Variovorax sp. OAS795 ABID97_RS20265 site-specific tyrosine recombinase XerD insig. 33 74
  Desulfovibrio vulgaris Miyazaki F DvMF_0359 tyrosine recombinase XerD (RefSeq) strong 39 59
  Herbaspirillum seropedicae SmR1 HSERO_RS04265 tyrosine recombinase XerD insig. 37 62
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5461 Tyrosine recombinase XerD insig. 37 62
  Pseudomonas putida KT2440 PP_1468 Tyrosine recombinase XerD strong 40 62
  Variovorax sp. SCN45 GFF2772 Site-specific tyrosine recombinase XerD strong 38 57
  Kangiella aquimarina DSM 16071 B158DRAFT_2265 tyrosine recombinase XerD strong 36 61
  Dechlorosoma suillum PS Dsui_1217 tyrosine recombinase XerD cofit 40 62
  Lysobacter sp. OAE881 ABIE51_RS04495 site-specific tyrosine recombinase XerD strong 39 62
  Ralstonia sp. UNC404CL21Col ABZR87_RS00795 site-specific tyrosine recombinase XerD strong 40 62
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1809 tyrosine recombinase XerD insig. 38 59
  Enterobacter asburiae PDN3 EX28DRAFT_2945 tyrosine recombinase XerD insig. 37 57
  Enterobacter sp. TBS_079 MPMX20_03753 Tyrosine recombinase XerD strong 37 57
  Pseudomonas stutzeri RCH2 Psest_3129 tyrosine recombinase XerD insig. 39 62
  Kangiella aquimarina DSM 16071 B158DRAFT_0244 tyrosine recombinase XerC subunit strong 38 59
  Dickeya dadantii 3937 DDA3937_RS03300 site-specific tyrosine recombinase XerD insig. 37 57
  Dickeya dianthicola 67-19 HGI48_RS03440 site-specific tyrosine recombinase XerD insig. 37 57
  Dickeya dianthicola ME23 DZA65_RS03485 site-specific tyrosine recombinase XerD no data 37 57
  Acidovorax sp. GW101-3H11 Ac3H11_302 Tyrosine recombinase XerD no data 35 62
  Pseudomonas syringae pv. syringae B728a Psyr_1286 tyrosine recombinase XerD subunit sig. 37 62
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1286 tyrosine recombinase XerD subunit sig. 37 62
  Pantoea sp. MT58 IAI47_03820 site-specific tyrosine recombinase XerD strong 36 57
  Pectobacterium carotovorum WPP14 HER17_RS17890 site-specific tyrosine recombinase XerD strong 37 57
  Alteromonas macleodii MIT1002 MIT1002_00786 Tyrosine recombinase XerD insig. 36 57
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4441.1 Tyrosine recombinase XerD sig. 38 61
  Erwinia tracheiphila SCR3 LU632_RS05975 xerD site-specific tyrosine recombinase XerD no data 36 57
  Escherichia coli ECRC102 NIAGMN_17335 xerD site-specific tyrosine recombinase XerD no data 36 57
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2991 Tyrosine recombinase XerD cofit 36 57
  Escherichia coli BL21 ECD_02726 site-specific tyrosine recombinase strong 36 57
  Escherichia fergusonii Becca EFB2_01007 Tyrosine recombinase XerD strong 36 57
  Escherichia coli ECOR27 NOLOHH_11495 xerD site-specific tyrosine recombinase XerD cofit 36 57
  Escherichia coli ECRC100 OKFHMN_19570 xerD site-specific tyrosine recombinase XerD cofit 36 57
  Escherichia coli ECRC101 MCAODC_10090 xerD site-specific tyrosine recombinase XerD no data 36 57
  Escherichia coli ECRC62 BNILDI_10025 xerD site-specific tyrosine recombinase XerD cofit 36 57
  Escherichia coli ECRC98 JDDGAC_23210 xerD site-specific tyrosine recombinase XerD no data 36 57
  Escherichia coli ECRC99 KEDOAH_08570 xerD site-specific tyrosine recombinase XerD no data 36 57
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00821 Tyrosine recombinase XerD sig. 36 57
  Escherichia coli Nissle 1917 ECOLIN_RS16125 site-specific tyrosine recombinase XerD strong 36 57
  Escherichia coli BW25113 b2894 xerD site-specific tyrosine recombinase XerD (NCBI) strong 36 57
  Rahnella sp. WP5 EX31_RS13480 site-specific tyrosine recombinase XerD strong 36 57
  Acinetobacter radioresistens SK82 MPMX26_00169 Tyrosine recombinase XerD no data 36 61
  Escherichia coli ECOR38 HEPCGN_18860 xerD site-specific tyrosine recombinase XerD sig. 36 57
  Serratia liquefaciens MT49 IAI46_20730 site-specific tyrosine recombinase XerD insig. 35 57
  Dechlorosoma suillum PS Dsui_2597 tyrosine recombinase XerD cofit 36 62
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09520 site-specific tyrosine recombinase XerD sig. 35 58
  Klebsiella michiganensis M5al BWI76_RS23815 site-specific tyrosine recombinase XerD no data 35 57
  Vibrio cholerae E7946 ATCC 55056 CSW01_12250 site-specific tyrosine recombinase XerD strong 36 57
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3270 Site-specific recombinase XerD insig. 33 58
  Bacteroides ovatus ATCC 8483 BACOVA_02123 tyrosine recombinase XerD insig. 36 58
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00850 site-specific tyrosine recombinase XerD no data 34 62
  Mycobacterium tuberculosis H37Rv Rv1701 Probable integrase/recombinase sig. 39 57
  Shewanella sp. ANA-3 Shewana3_0393 tyrosine recombinase XerC (RefSeq) strong 35 60
  Shewanella sp. ANA-3 Shewana3_3331 tyrosine recombinase XerD (RefSeq) strong 37 57
  Shewanella oneidensis MR-1 SO0950 xerD integrase/recombinase XerD (NCBI ptt file) strong 35 57
  Shewanella loihica PV-4 Shew_0770 tyrosine recombinase XerD (RefSeq) strong 37 57
  Pseudomonas syringae pv. syringae B728a Psyr_0185 tyrosine recombinase XerC subunit sig. 37 57
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0185 tyrosine recombinase XerC subunit sig. 37 57
  Shewanella loihica PV-4 Shew_0325 tyrosine recombinase XerC (RefSeq) sig. 36 57
  Shewanella oneidensis MR-1 SO4306 xerC integrase/recombinase XerC (NCBI ptt file) strong 35 60
  Shewanella amazonensis SB2B Sama_3247 integrase/recombinase XerC (RefSeq) strong 36 60
  Phocaeicola dorei CL03T12C01 ABI39_RS07000 site-specific tyrosine recombinase XerD sig. 33 66
  Mycobacterium tuberculosis H37Rv Rv2894c Probable integrase/recombinase XerC no data 38 57
  Bifidobacterium breve UCC2003 BBR_RS16655 tyrosine recombinase XerC strong 38 60
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4416 Tyrosine recombinase XerC strong 34 65
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17800 tyrosine-type recombinase/integrase insig. 34 59
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19035 integrase no data 34 58
  Paraburkholderia sabiae LMG 24235 QEN71_RS00355 tyrosine recombinase XerC no data 35 59