Homologs of CSW01_18825 from Vibrio cholerae E7946 ATCC 55056

GGDEF domain-containing protein
SEED: sensory box/GGDEF family protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_18825 GGDEF domain-containing protein insig. 100 100
  Synechococcus elongatus PCC 7942 Synpcc7942_1811 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor sig. 31 89
  Desulfovibrio vulgaris Miyazaki F DvMF_1477 diguanylate cyclase with PAS/PAC sensor (RefSeq) sig. 30 94
  Pseudomonas fluorescens GW456-L13 PfGW456L13_492 Sensory box/GGDEF family protein insig. 31 81
  Rhizobium sp. OAE497 ABIE40_RS15540 EAL domain-containing protein insig. 33 89
o Pseudomonas aeruginosa PA14 IKLFDK_24010 diguanylate cyclase insig. 33 84
  Azospirillum brasilense Sp245 AZOBR_RS15555 transcriptional regulator insig. 41 52
  Magnetospirillum magneticum AMB-1 AMB_RS16670 diguanylate cyclase insig. 42 52
  Acidovorax sp. GW101-3H11 Ac3H11_1120 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF) insig. 42 50
  Pseudomonas sp. DMC3 GFF4253 hypothetical protein insig. 32 82
  Magnetospirillum magneticum AMB-1 AMB_RS23665 GGDEF domain-containing protein insig. 34 89
  Rhodopseudomonas palustris CGA009 TX73_020695 diguanylate cyclase insig. 39 55
  Azospirillum brasilense Sp245 AZOBR_RS10245 diguanylate cyclase sig. 37 55
  Desulfovibrio vulgaris Miyazaki F DvMF_2350 diguanylate cyclase with PAS/PAC and GAF sensors (RefSeq) insig. 38 57
  Pseudomonas stutzeri RCH2 Psest_0767 diguanylate cyclase (GGDEF) domain sig. 43 52
  Acidovorax sp. GW101-3H11 Ac3H11_3285 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 39 52
  Shewanella oneidensis MR-1 SO2174 cyclic nucleotide phosphodiesterase, putative (NCBI ptt file) insig. 39 55
  Pseudomonas sp. BP01 JOY50_RS18500 sensor domain-containing diguanylate cyclase insig. 31 82
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1731 Sensory box/GGDEF family protein insig. 30 82
  Pseudomonas sp. RS175 PFR28_02096 hypothetical protein insig. 39 55
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1642 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 38 55
  Pseudomonas simiae WCS417 PS417_00910 diguanylate cyclase insig. 33 82
  Shewanella sp. ANA-3 Shewana3_2431 diguanylate cyclase (RefSeq) insig. 38 59
  Synechococcus elongatus PCC 7942 Synpcc7942_1158 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) insig. 30 83
o Pseudomonas fluorescens FW300-N2E3 AO353_11520 diguanylate cyclase strong 33 82
o Pseudomonas sp. SVBP6 COO64_RS12490 sensor domain-containing diguanylate cyclase insig. 31 82
  Desulfovibrio vulgaris Miyazaki F DvMF_2758 diguanylate cyclase with PAS/PAC sensor (RefSeq) insig. 38 54
  Pseudomonas fluorescens FW300-N2C3 AO356_24210 diguanylate cyclase sig. 37 55
  Rhodospirillum rubrum S1H Rru_A3374 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain (NCBI) insig. 35 59
  Pseudomonas stutzeri RCH2 Psest_4293 PAS domain S-box/diguanylate cyclase (GGDEF) domain sig. 32 82
  Pseudomonas syringae pv. syringae B728a Psyr_0088 PAS:GGDEF insig. 30 82
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0088 PAS:GGDEF insig. 30 82
  Kangiella aquimarina DSM 16071 B158DRAFT_0300 diguanylate cyclase (GGDEF) domain insig. 33 64
  Shewanella loihica PV-4 Shew_1681 diguanylate cyclase with PAS/PAC sensor (RefSeq) cofit 40 56
  Acidovorax sp. GW101-3H11 Ac3H11_2965 Putative diguanylate cyclase (GGDEF domain) insig. 39 57
  Pseudomonas putida KT2440 PP_0216 putative sensory box/GGDEF family protein insig. 37 55
  Pseudomonas fluorescens FW300-N2C3 AO356_10705 diguanylate cyclase insig. 35 57
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4011 Sensory box/GGDEF family protein insig. 35 57
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4001 FIG00638997: hypothetical protein insig. 39 54
o Pseudomonas fluorescens SBW25 PFLU_RS00925 sensor domain-containing diguanylate cyclase insig. 30 92
o Pseudomonas fluorescens SBW25-INTG PFLU_RS00925 sensor domain-containing diguanylate cyclase sig. 30 92
  Herbaspirillum seropedicae SmR1 HSERO_RS01285 diguanylate cyclase insig. 39 56
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS19325 diguanylate cyclase insig. 41 51
  Azospirillum sp. SherDot2 MPMX19_01660 Response regulator PleD insig. 36 54
  Pseudomonas sp. RS175 PFR28_04758 hypothetical protein insig. 34 57
  Acidovorax sp. GW101-3H11 Ac3H11_3582 diguanylate cyclase (GGDEF domain) insig. 28 96
  Bosea sp. OAE506 ABIE41_RS18170 PleD family two-component system response regulator insig. 38 50
  Alteromonas macleodii MIT1002 MIT1002_00987 Stalked cell differentiation-controlling protein insig. 38 51
  Shewanella loihica PV-4 Shew_0452 diguanylate cyclase (RefSeq) insig. 33 62
  Pseudomonas sp. S08-1 OH686_05940 GGDEF domain protein cofit 41 51
  Rhodospirillum rubrum S1H Rru_A1908 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor and Response Regulator Receiver modulation (NCBI) insig. 41 53
  Azospirillum brasilense Sp245 AZOBR_RS06990 response regulator receiver modulated diguanylate cyclase insig. 39 53
  Shewanella sp. ANA-3 Shewana3_0747 diguanylate cyclase (RefSeq) strong 38 52
  Azospirillum sp. SherDot2 MPMX19_01264 hypothetical protein insig. 35 55
  Shewanella amazonensis SB2B Sama_3137 response regulator receiver protein (RefSeq) strong 33 63
  Cupriavidus basilensis FW507-4G11 RR42_RS01480 hypothetical protein insig. 34 78
  Acidovorax sp. GW101-3H11 Ac3H11_4120 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 31 88
  Escherichia fergusonii Becca EFB2_02587 Diguanylate cyclase DgcM insig. 40 54
  Escherichia coli Nissle 1917 ECOLIN_RS08045 diguanylate cyclase DgcM insig. 40 54
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS02415 GGDEF domain-containing protein insig. 39 50
  Ralstonia solanacearum UW163 UW163_RS11310 GGDEF domain-containing protein insig. 39 50
  Azospirillum sp. SherDot2 MPMX19_04876 hypothetical protein insig. 39 53
  Cupriavidus basilensis FW507-4G11 RR42_RS08985 diguanylate cyclase insig. 38 55
  Escherichia coli ECOR27 NOLOHH_19900 dgcM diguanylate cyclase DgcM cofit 40 54
  Escherichia coli ECOR38 HEPCGN_25975 dgcM diguanylate cyclase DgcM insig. 40 54
  Escherichia coli ECRC100 OKFHMN_02185 dgcM diguanylate cyclase DgcM insig. 40 54
  Escherichia coli ECRC101 MCAODC_16070 dgcM diguanylate cyclase DgcM insig. 40 54
  Escherichia coli ECRC102 NIAGMN_26355 dgcM diguanylate cyclase DgcM insig. 40 54
  Escherichia coli ECRC98 JDDGAC_04745 dgcM diguanylate cyclase DgcM insig. 40 54
  Escherichia coli ECRC99 KEDOAH_26570 dgcM diguanylate cyclase DgcM no data 40 54
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02341 Diguanylate cyclase DgcM insig. 40 54
  Escherichia coli BW25113 b1341 b1341 orf, hypothetical protein (VIMSS) strong 40 54
  Methylophilus sp. DMC18 GFF996 hypothetical protein cofit 39 50
  Escherichia coli BL21 ECD_01318 diguanylate cyclase, csgD regulator insig. 38 55
  Rhodopseudomonas palustris CGA009 TX73_008830 diguanylate cyclase insig. 42 51
  Escherichia coli ECRC62 BNILDI_18050 dgcM diguanylate cyclase DgcM insig. 40 54
  Ralstonia solanacearum PSI07 RPSI07_RS09290 GGDEF domain-containing protein insig. 38 51
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS16665 GGDEF domain-containing protein insig. 40 51
  Ralstonia solanacearum UW163 UW163_RS18020 GGDEF domain-containing protein insig. 40 51
  Desulfovibrio vulgaris Miyazaki F DvMF_2637 diguanylate cyclase with extracellular sensor (RefSeq) insig. 40 50
  Dechlorosoma suillum PS Dsui_0970 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 30 85
  Shewanella loihica PV-4 Shew_2977 diguanylate cyclase (RefSeq) strong 39 50
  Azospirillum sp. SherDot2 MPMX19_03993 hypothetical protein insig. 36 52
  Magnetospirillum magneticum AMB-1 AMB_RS17460 PAS domain S-box protein cofit 30 88
  Pseudomonas putida KT2440 PP_0798 GGDEF domain protein insig. 40 52
  Shewanella sp. ANA-3 Shewana3_1161 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 38 59
  Pseudomonas sp. S08-1 OH686_11660 hypothetical protein cofit 32 82
  Castellaniella sp019104865 MT123 ABCV34_RS14090 EAL domain-containing protein cofit 28 89
  Pseudomonas syringae pv. syringae B728a Psyr_1125 GGDEF domain protein insig. 41 53
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1125 GGDEF domain protein insig. 41 53
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5364 GGDEF domain protein insig. 40 50
  Rhodospirillum rubrum S1H Rru_A0985 Putative diguanylate cyclase (GGDEF domain) (NCBI) insig. 40 51
  Pseudomonas sp. SVBP6 COO64_RS16430 sensor domain-containing diguanylate cyclase insig. 39 51
  Shewanella oneidensis MR-1 SO3859 cyclic nucleotide phosphodiesterase, putative (NCBI ptt file) insig. 39 50
  Azospirillum sp. SherDot2 MPMX19_01522 Response regulator PleD insig. 38 51
  Shewanella oneidensis MR-1 SO3389 sensory box protein (NCBI ptt file) insig. 38 59
  Ralstonia sp. UNC404CL21Col ABZR87_RS23605 sensor domain-containing diguanylate cyclase no data 38 62
  Azospirillum sp. SherDot2 MPMX19_01436 hypothetical protein insig. 37 51
  Synechocystis sp000284455 PCC 6803 SGL_RS11860 EAL domain-containing protein insig. 32 58
  Pseudomonas fluorescens FW300-N2C3 AO356_17195 deoxyribonuclease sig. 39 50