Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_16655 | | TldD protein | insig. | 100 | 100 |
o | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS02440 | | TldD protein | insig. | 70 | 100 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS03855 | | TldD protein | insig. | 72 | 100 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS03845 | | TldD protein | insig. | 68 | 100 |
o | Caulobacter crescentus NA1000 | CCNA_02914 | | zinc metalloprotease | insig. | 66 | 100 |
o | Caulobacter crescentus NA1000 Δfur | CCNA_02914 | | zinc metalloprotease | cofit | 66 | 100 |
o | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.122.1 | | TldD family protein, Actinobacterial subgroup | insig. | 67 | 100 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.123.1 | | TldD family protein, Actinobacterial subgroup | insig. | 64 | 100 |
o | Lysobacter sp. OAE881 | ABIE51_RS18050 | | TldD/PmbA family protein | insig. | 63 | 100 |
| Lysobacter sp. OAE881 | ABIE51_RS18060 | | TldD/PmbA family protein | insig. | 69 | 100 |
o | Mycobacterium tuberculosis H37Rv | Rv2315c | | Conserved protein | insig. | 42 | 94 |
o | Cupriavidus basilensis FW507-4G11 | RR42_RS36585 | | peptidase C69 | insig. | 30 | 90 |
o | Pseudomonas putida KT2440 | PP_4949 | | putative peptidase, TldD/PmbA family | insig. | 30 | 91 |
o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2415 | | TldD family protein, Beta/Gamma-proteobacterial subgroup | insig. | 28 | 91 |
o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1081 | | TldD family protein, Beta/Gamma-proteobacterial subgroup | insig. | 28 | 91 |
o | Paraburkholderia sabiae LMG 24235 | QEN71_RS21375 | | TldD/PmbA family protein | insig. | 29 | 81 |
o | Pseudomonas fluorescens FW300-N2E3 | AO353_07835 | | peptidase C69 | insig. | 29 | 91 |
o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4676 | | TldD family protein, Beta/Gamma-proteobacterial subgroup | insig. | 30 | 91 |
o | Pseudomonas fluorescens FW300-N2C3 | AO356_13785 | | peptidase C69 | insig. | 29 | 91 |
o | Pseudomonas sp. RS175 | PFR28_04169 | | hypothetical protein | insig. | 29 | 91 |
o | Pseudomonas fluorescens SBW25 | PFLU_RS28000 | | TldD/PmbA family protein | insig. | 27 | 89 |
o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS28000 | | TldD/PmbA family protein | insig. | 27 | 89 |
o | Pseudomonas syringae pv. syringae B728a | Psyr_4767 | | Peptidase U62, modulator of DNA gyrase | insig. | 29 | 88 |
o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4767 | | Peptidase U62, modulator of DNA gyrase | insig. | 29 | 88 |
o | Burkholderia phytofirmans PsJN | BPHYT_RS07175 | | peptidase C69 | insig. | 29 | 64 |
o | Paraburkholderia graminis OAS925 | ABIE53_006371 | | putative Zn-dependent protease | insig. | 29 | 64 |
o | Pseudomonas simiae WCS417 | PS417_26350 | | peptidase C69 | insig. | 27 | 89 |
o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04898 | | Predicted Zn-dependent protease or its inactivated homolog | insig. | 35 | 46 |
o | Methanococcus maripaludis JJ | MMJJ_RS06710 | | TldD/PmbA family protein | insig. | 27 | 89 |
o | Methanococcus maripaludis S2 | MMP_RS07650 | | TldD/PmbA family protein | strong | 27 | 89 |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1127 | tldD | microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 | strong | 25 | 79 |
| Alteromonas macleodii MIT1002 | MIT1002_00227 | | protease TldD | cofit | 27 | 74 |
o | Bacteroides thetaiotaomicron VPI-5482 | BT3648 | | putative modulator of DNA gyrase (NCBI ptt file) | insig. | 25 | 89 |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1875 | | hypothetical protein | strong | 24 | 83 |
o | Vibrio cholerae E7946 ATCC 55056 | CSW01_02220 | | metalloprotease TldD | cofit | 26 | 81 |
| Caulobacter crescentus NA1000 | CCNA_03522 | | Zn-dependent protease TldD | cofit | 24 | 72 |
| Caulobacter crescentus NA1000 Δfur | CCNA_03522 | | Zn-dependent protease TldD | cofit | 24 | 72 |
| Serratia liquefaciens MT49 | IAI46_22685 | | metalloprotease TldD | insig. | 26 | 72 |
| Phaeobacter inhibens DSM 17395 | PGA1_c06240 | | protein TldD | strong | 24 | 80 |
o | Bacteroides stercoris CC31F | HMPREF1181_RS03165 | | TldD/PmbA family protein | insig. | 25 | 90 |
| Dinoroseobacter shibae DFL-12 | Dshi_1139 | | peptidase U62 modulator of DNA gyrase (RefSeq) | sig. | 29 | 38 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1883.1 | | TldD protein, part of TldE/TldD proteolytic complex | cofit | 26 | 74 |
o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS05455 | | metalloprotease TldD | cofit | 25 | 83 |
o | Ralstonia solanacearum UW163 | UW163_RS08170 | | metalloprotease TldD | insig. | 25 | 83 |
| Rhodopseudomonas palustris CGA009 | TX73_004255 | | metalloprotease TldD | insig. | 29 | 38 |
o | Agrobacterium fabrum C58 | Atu0765 | | TldD | insig. | 23 | 83 |
| Shewanella loihica PV-4 | Shew_0410 | | peptidase U62, modulator of DNA gyrase (RefSeq) | sig. | 27 | 74 |
| Sinorhizobium meliloti 1021 | SMc00960 | | hypothetical protein | sig. | 26 | 49 |
| Lysobacter sp. OAE881 | ABIE51_RS06795 | | metalloprotease TldD | insig. | 26 | 74 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS21715 | | metalloprotease TldD | insig. | 25 | 72 |
o | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS03620 | | TldD/PmbA family protein | cofit | 23 | 89 |
o | Magnetospirillum magneticum AMB-1 | AMB_RS21030 | | metalloprotease TldD | insig. | 29 | 49 |
o | Ralstonia sp. UNC404CL21Col | ABZR87_RS01105 | | metalloprotease TldD | cofit | 25 | 81 |
| Rhizobium sp. OAE497 | ABIE40_RS04050 | | metalloprotease TldD | strong | 28 | 49 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_05215 | | protease TldD | cofit | 28 | 48 |
o | Ralstonia solanacearum PSI07 | RPSI07_RS11850 | | metalloprotease TldD | sig. | 25 | 83 |
| Pseudomonas sp. RS175 | PFR28_00161 | | Metalloprotease TldD | insig. | 28 | 48 |
| Pseudomonas syringae pv. syringae B728a | Psyr_4156 | | microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 | insig. | 24 | 80 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4156 | | microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 | insig. | 24 | 80 |
| Kangiella aquimarina DSM 16071 | B158DRAFT_2072 | | microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 | insig. | 25 | 80 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_07095 | | protease TldD | insig. | 28 | 48 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3280 | | TldD protein, part of TldE/TldD proteolytic complex | sig. | 28 | 48 |
| Sphingomonas koreensis DSMZ 15582 | Ga0059261_2252 | | Predicted Zn-dependent proteases and their inactivated homologs | insig. | 25 | 72 |
| Shewanella sp. ANA-3 | Shewana3_3641 | | microcin-processing peptidase 2 (RefSeq) | insig. | 28 | 74 |
o | Ralstonia solanacearum GMI1000 | RS_RS13315 | | metalloprotease TldD | sig. | 24 | 83 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1092 | | TldD protein, part of TldE/TldD proteolytic complex | sig. | 27 | 48 |
o | Dechlorosoma suillum PS | Dsui_3401 | | putative Zn-dependent protease-like protein | strong | 25 | 82 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_5026 | | TldD protein, part of TldE/TldD proteolytic complex | insig. | 27 | 48 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS14110 | | protease TldD | insig. | 29 | 48 |
| Pseudomonas putida KT2440 | PP_0940 | | putative protease involved in Microcin B17 maturation and in sensitivity to the DNA gyrase inhibitor LetD | sig. | 29 | 40 |
| Pseudomonas fluorescens SBW25 | PFLU_RS04340 | | metalloprotease TldD | insig. | 27 | 48 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS04340 | | metalloprotease TldD | sig. | 27 | 48 |
| Pseudomonas simiae WCS417 | PS417_04285 | | protease TldD | sig. | 27 | 48 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS05875 | | protease TldD | insig. | 24 | 83 |
| Pantoea sp. MT58 | IAI47_02465 | | metalloprotease TldD | cofit | 25 | 72 |
| Dickeya dadantii 3937 | DDA3937_RS01460 | | metalloprotease TldD | strong | 25 | 72 |
| Dickeya dianthicola 67-19 | HGI48_RS01380 | | metalloprotease TldD | insig. | 25 | 72 |
| Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS10860 | | metalloprotease TldD | insig. | 24 | 72 |
| Paraburkholderia graminis OAS925 | ABIE53_000851 | | TldD protein | sig. | 24 | 74 |
| Dickeya dianthicola ME23 | DZA65_RS01440 | | metalloprotease TldD | insig. | 25 | 72 |
| Pseudomonas stutzeri RCH2 | Psest_3320 | | Predicted Zn-dependent proteases and their inactivated homologs | insig. | 25 | 74 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04688 | | microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 | insig. | 24 | 74 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_10280 | tldD | metalloprotease TldD | cofit | 26 | 41 |
| Escherichia coli ECRC101 | OKFHMN_17755 | tldD | metalloprotease TldD | sig. | 25 | 72 |
| Escherichia coli ECRC101 | MCAODC_08275 | tldD | metalloprotease TldD | insig. | 25 | 72 |
| Escherichia coli ECRC102 | NIAGMN_15515 | tldD | metalloprotease TldD | strong | 25 | 72 |
| Escherichia coli ECRC98 | JDDGAC_21380 | tldD | metalloprotease TldD | no data | 25 | 72 |
| Escherichia coli ECRC99 | KEDOAH_10395 | tldD | metalloprotease TldD | no data | 25 | 72 |
| Rhodospirillum rubrum S1H | Rru_A0567 | | Peptidase U62, modulator of DNA gyrase (NCBI) | insig. | 27 | 43 |
o | Pseudomonas sp. S08-1 | OH686_08580 | | TldD protein, part of TldE/TldD proteolytic complex | cofit | 26 | 46 |
| Rhodanobacter denitrificans MT42 | LRK55_RS03145 | | metalloprotease TldD | strong | 27 | 41 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2140 | | TldD protein, part of TldE/TldD proteolytic complex | insig. | 25 | 72 |
| Burkholderia phytofirmans PsJN | BPHYT_RS03540 | | peptidase C69 | insig. | 24 | 74 |
| Escherichia coli BL21 | ECD_03104 | | putative peptidase | insig. | 25 | 72 |
| Escherichia fergusonii Becca | EFB2_00586 | | Metalloprotease TldD | insig. | 25 | 72 |
| Escherichia coli ECOR27 | NOLOHH_09555 | tldD | metalloprotease TldD | cofit | 25 | 72 |
| Escherichia coli ECOR38 | HEPCGN_16620 | tldD | metalloprotease TldD | cofit | 25 | 72 |
| Escherichia coli ECRC62 | BNILDI_01980 | tldD | metalloprotease TldD | insig. | 25 | 72 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_00460 | | Metalloprotease TldD | insig. | 25 | 72 |
| Escherichia coli Nissle 1917 | ECOLIN_RS18595 | | metalloprotease TldD | insig. | 25 | 72 |