Homologs of Atu5428 from Agrobacterium fabrum C58

DNA-damage-inducible protein F
SEED: DNA-damage-inducible protein F

99 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Agrobacterium fabrum C58 Atu5428 DNA-damage-inducible protein F insig. 100 100
o Sinorhizobium meliloti 1021 SMc02244 transmembrane protein insig. 44 97
o Xanthobacter sp. DMC5 GFF148 DNA damage-inducible protein F insig. 44 96
o Rhizobium sp. OAE497 ABIE40_RS02425 MATE family efflux transporter insig. 41 98
o Rhodopseudomonas palustris CGA009 TX73_004125 MATE family efflux transporter insig. 43 91
o Phaeobacter inhibens DSM 17395 PGA1_c12130 DNA-damage-inducible protein F sig. 39 98
o Dinoroseobacter shibae DFL-12 Dshi_0845 MATE efflux family protein (RefSeq) strong 39 96
o Cupriavidus basilensis FW507-4G11 RR42_RS09395 multidrug transporter MatE insig. 36 95
o Ralstonia sp. UNC404CL21Col ABZR87_RS22695 MATE family efflux transporter insig. 37 94
o Marinobacter adhaerens HP15 HP15_3770 MATE efflux family protein insig. 36 93
  Paraburkholderia graminis OAS925 ABIE53_002980 MATE family multidrug resistance protein insig. 36 94
o Paraburkholderia sabiae LMG 24235 QEN71_RS04895 MATE family efflux transporter insig. 36 94
o Burkholderia phytofirmans PsJN BPHYT_RS14080 multidrug transporter MatE insig. 36 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04426 multidrug resistance protein, MATE family insig. 36 99
o Shewanella amazonensis SB2B Sama_3501 DNA-damage-inducible protein F (RefSeq) sig. 37 93
  Vibrio cholerae E7946 ATCC 55056 CSW01_00480 MATE family efflux transporter insig. 37 92
  Shewanella loihica PV-4 Shew_0107 MATE efflux family protein (RefSeq) sig. 37 93
  Alteromonas macleodii MIT1002 MIT1002_04023 DNA-damage-inducible protein F insig. 35 98
  Bacteroides stercoris CC31F HMPREF1181_RS09420 MATE family efflux transporter insig. 32 97
  Ralstonia solanacearum GMI1000 RS_RS18520 MATE family efflux transporter insig. 37 94
  Ralstonia solanacearum PSI07 RPSI07_RS01180 MATE family efflux transporter insig. 37 94
  Bacteroides ovatus ATCC 8483 BACOVA_03104 MATE efflux family protein insig. 32 92
  Shewanella oneidensis MR-1 SO4617 dinF DNA-damage-inducible protein F (NCBI ptt file) sig. 34 92
  Bacteroides thetaiotaomicron VPI-5482 BT2241 DNA-damage-inducible protein F (NCBI ptt file) sig. 32 92
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13880 MATE family efflux transporter sig. 32 92
  Pantoea sp. MT58 IAI47_17885 MATE family efflux transporter DinF insig. 34 95
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS21210 MATE family efflux transporter DinF cofit 34 95
  Rahnella sp. WP5 EX31_RS11850 MATE family efflux transporter DinF insig. 35 93
  Shewanella sp. ANA-3 Shewana3_4001 MATE efflux family protein (RefSeq) sig. 35 92
  Phocaeicola dorei CL03T12C01 ABI39_RS09485 MATE family efflux transporter insig. 31 92
  Kangiella aquimarina DSM 16071 B158DRAFT_0674 putative efflux protein, MATE family insig. 33 94
  Serratia liquefaciens MT49 IAI46_23000 MATE family efflux transporter DinF insig. 36 92
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1413 DNA-damage-inducible protein F insig. 34 95
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS15090 MATE family efflux transporter insig. 32 91
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1292 DNA-damage-inducible protein F insig. 34 94
  Pseudomonas simiae WCS417 PS417_03010 XRE family transcriptional regulator insig. 36 96
  Enterobacter asburiae PDN3 EX28DRAFT_4268 putative efflux protein, MATE family insig. 35 93
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3500 DNA-damage-inducible protein F insig. 35 93
  Pseudomonas stutzeri RCH2 Psest_3364 putative efflux protein, MATE family insig. 35 94
  Pseudomonas sp. DMC3 GFF3325 DNA damage-inducible protein F cofit 34 95
  Pseudomonas fluorescens GW456-L13 PfGW456L13_40 DNA-damage-inducible protein F insig. 33 96
  Pseudomonas putida KT2440 PP_0569 MATE efflux family protein insig. 35 94
  Pseudomonas orientalis W4I3 QF045_RS06045 MATE family efflux transporter cofit 35 93
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00834 DNA damage-inducible protein F cofit 36 96
  Enterobacter sp. TBS_079 MPMX20_00260 DNA damage-inducible protein F insig. 35 92
  Erwinia amylovora T8 OLJFJH_03575 MATE family efflux transporter DinF insig. 34 94
  Pseudomonas sp. BP01 JOY50_RS23180 MATE family efflux transporter insig. 34 94
  Escherichia coli BL21 ECD_03916 oxidative stress resistance protein; putative MATE family efflux pump; UV and mitomycin C inducible protein insig. 35 92
  Escherichia coli ECOR27 NOLOHH_05215 dinF MATE family efflux transporter DinF insig. 35 92
  Escherichia coli BW25113 b4044 dinF DNA-damage-inducible SOS response protein (NCBI) insig. 35 92
  Pseudomonas fluorescens FW300-N2C3 AO356_08140 MATE family efflux transporter insig. 35 93
  Escherichia coli ECRC100 OKFHMN_13060 dinF MATE family efflux transporter DinF insig. 35 92
  Escherichia coli ECRC101 MCAODC_03560 dinF MATE family efflux transporter DinF insig. 35 92
  Escherichia coli ECRC102 NIAGMN_10810 dinF MATE family efflux transporter DinF insig. 35 92
  Escherichia coli ECRC62 BNILDI_06305 dinF MATE family efflux transporter DinF insig. 35 92
  Escherichia coli ECRC98 JDDGAC_16685 dinF MATE family efflux transporter DinF insig. 35 92
  Escherichia coli ECRC99 KEDOAH_15100 dinF MATE family efflux transporter DinF no data 35 92
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03999 DNA damage-inducible protein F insig. 35 92
  Escherichia fergusonii Becca EFB2_04559 DNA damage-inducible protein F insig. 35 92
  Escherichia coli Nissle 1917 ECOLIN_RS23340 MATE family efflux transporter DinF insig. 35 92
  Klebsiella pneumoniae MRSN742743 KFA93_RS21770 dinF;go_component=membrane|0016020||IEA;go_function=antiporter MATE family efflux transporter DinF insig. 34 95
  Pseudomonas syringae pv. syringae B728a Psyr_4384 Multi antimicrobial extrusion protein MatE insig. 33 93
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4384 Multi antimicrobial extrusion protein MatE insig. 33 93
  Klebsiella pneumoniae MKP103 KDGMDA_10335 MATE family efflux transporter DinF insig. 34 95
  Escherichia coli ECOR38 HEPCGN_11580 dinF MATE family efflux transporter DinF insig. 35 92
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1394 putative efflux protein, MATE family insig. 34 97
  Pseudomonas fluorescens FW300-N2E3 AO353_13735 MATE family efflux transporter insig. 33 92
  Klebsiella michiganensis M5al BWI76_RS01880 MATE family efflux transporter insig. 35 93
  Pseudomonas segetis P6 ACVTMO_RS20250 MATE family efflux transporter insig. 34 91
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00490 MATE family efflux transporter insig. 32 92
  Pseudomonas sp. RS175 PFR28_05231 DNA damage-inducible protein F insig. 34 93
  Pseudomonas fluorescens SBW25 PFLU_RS03090 MATE family efflux transporter insig. 36 96
  Pseudomonas fluorescens SBW25-INTG PFLU_RS03090 MATE family efflux transporter insig. 36 96
  Pseudomonas sp. SVBP6 COO64_RS18420 MATE family efflux transporter insig. 33 97
  Pseudomonas aeruginosa PA14 IKLFDK_29470 DNA-damage-inducible protein F sig. 33 91
  Pseudomonas aeruginosa PUPa3 DQ20_RS52175 MATE family efflux transporter insig. 33 91
  Pseudomonas aeruginosa MRSN321 DY961_RS09875 MATE family efflux transporter sig. 33 91
  Pseudomonas sp. S08-1 OH686_07530 MATE efflux family protein insig. 34 93
  Synechocystis sp000284455 PCC 6803 SGL_RS06455 guanitoxin biosynthesis MATE family efflux transporter GntT strong 28 90
  Cellulophaga baltica 18 M666_RS04275 MATE family efflux transporter insig. 27 93
  Bifidobacterium breve UCC2003 BBR_RS11530 MATE family efflux transporter insig. 26 89
  Shewanella oneidensis MR-1 SO1918 MATE efflux family protein (NCBI ptt file) insig. 27 54
  Shewanella sp. ANA-3 Shewana3_1699 MATE efflux family protein (RefSeq) insig. 28 54
  Phocaeicola dorei CL03T12C01 ABI39_RS19295 MATE family efflux transporter insig. 25 90
  Lysobacter sp. OAE881 ABIE51_RS06300 MATE family efflux transporter insig. 27 69
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS09785 MATE family efflux transporter insig. 26 49
  Shewanella amazonensis SB2B Sama_2111 MATE efflux family protein (RefSeq) strong 30 40
  Bacteroides stercoris CC31F HMPREF1181_RS08560 MATE family efflux transporter insig. 25 57
  Dinoroseobacter shibae DFL-12 Dshi_0953 MATE efflux family protein (RefSeq) strong 27 78
  Shewanella loihica PV-4 Shew_1492 MATE efflux family protein (RefSeq) insig. 24 54
  Vibrio cholerae E7946 ATCC 55056 CSW01_08200 MATE family efflux transporter cofit 25 68
  Erwinia tracheiphila SCR3 LU632_RS22310 hypothetical protein insig. 40 12
  Variovorax sp. SCN45 GFF7698 Na+-driven multidrug efflux pump no data 30 41
  Bacteroides ovatus ATCC 8483 BACOVA_04342 MATE efflux family protein sig. 21 68
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS08960 MATE family efflux transporter strong 22 88
  Bacteroides thetaiotaomicron VPI-5482 BT2121 putative Na+-driven multidrug efflux pump (NCBI ptt file) sig. 22 90
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03825 MATE family efflux transporter insig. 26 65
  Pseudomonas sp. SVBP6 COO64_RS05190 MATE family efflux transporter insig. 25 99
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07675 MATE family efflux transporter sig. 24 76