Homologs of ABZR86_RS20265 from Dyella japonica UNC79MFTsu3.2

RNA polymerase sigma factor FliA
SEED: RNA polymerase sigma factor for flagellar operon
KEGG: RNA polymerase sigma factor for flagellar operon FliA

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS20265 RNA polymerase sigma factor FliA insig. 100 100
o Rhodanobacter denitrificans MT42 LRK55_RS13320 RNA polymerase sigma factor FliA insig. 81 93
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS13580 RNA polymerase sigma factor FliA strong 81 93
o Rhodanobacter sp. FW510-T8 OKGIIK_02830 fliA RNA polymerase sigma factor FliA insig. 81 93
o Lysobacter sp. OAE881 ABIE51_RS16865 RNA polymerase sigma factor FliA strong 56 93
o Pseudomonas sp. S08-1 OH686_02730 RNA polymerase sigma factor for flagellar operon cofit 56 89
o Marinobacter adhaerens HP15 HP15_2302 flagellar biosynthesis sigma factor FliA strong 53 92
o Alteromonas macleodii MIT1002 MIT1002_01103 Sigma-F factor sig. 52 89
o Pseudomonas syringae pv. syringae B728a Psyr_3437 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG strong 55 91
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3437 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG cofit 55 91
o Pseudomonas fluorescens SBW25 PFLU_RS21660 RNA polymerase sigma factor FliA cofit 54 91
o Pseudomonas fluorescens SBW25-INTG PFLU_RS21660 RNA polymerase sigma factor FliA strong 54 91
o Pseudomonas stutzeri RCH2 Psest_1740 RNA polymerase sigma factor, FliA/WhiG family strong 55 89
o Pseudomonas simiae WCS417 PS417_19695 flagellar biosynthesis sigma factor strong 54 91
o Pseudomonas sp. RS175 PFR28_00852 RNA polymerase sigma factor FliA strong 53 91
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3626 RNA polymerase sigma factor for flagellar operon insig. 53 91
o Pseudomonas fluorescens FW300-N2E3 AO353_18785 flagellar biosynthesis sigma factor strong 53 91
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4331 RNA polymerase sigma factor for flagellar operon insig. 53 91
o Pseudomonas putida KT2440 PP_4341 RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons strong 53 91
o Pseudomonas fluorescens FW300-N2C3 AO356_03730 flagellar biosynthesis sigma factor strong 53 91
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2573 RNA polymerase sigma factor for flagellar operon strong 53 91
o Shewanella amazonensis SB2B Sama_2280 fliA flagellar biosynthesis sigma factor (RefSeq) strong 49 93
o Shewanella loihica PV-4 Shew_1383 fliA flagellar biosynthesis sigma factor (RefSeq) strong 50 93
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2832.1 RNA polymerase sigma factor for flagellar operon cofit 56 90
o Vibrio cholerae E7946 ATCC 55056 CSW01_10335 RNA polymerase sigma factor FliA cofit 51 88
o Shewanella oneidensis MR-1 SO3210 fliA RNA polymerase sigma-27 factor (NCBI ptt file) strong 47 93
o Shewanella sp. ANA-3 Shewana3_1359 fliA flagellar biosynthesis sigma factor (RefSeq) strong 47 93
o Dechlorosoma suillum PS Dsui_1726 RNA polymerase sigma factor, FliA/WhiG family cofit 50 86
o Paraburkholderia sabiae LMG 24235 QEN71_RS28940 RNA polymerase sigma factor FliA strong 50 92
o Paraburkholderia graminis OAS925 ABIE53_000108 RNA polymerase sigma factor for flagellar operon FliA strong 49 86
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05756 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG strong 48 86
o Herbaspirillum seropedicae SmR1 HSERO_RS10160 flagellar biosynthesis sigma factor strong 45 88
o Burkholderia phytofirmans PsJN BPHYT_RS18925 RNA polymerase sigma70 strong 48 86
o Acidovorax sp. GW101-3H11 Ac3H11_1381 RNA polymerase sigma factor for flagellar operon sig. 45 88
o Escherichia coli ECOR27 NOLOHH_16400 fliA RNA polymerase sigma factor FliA cofit 50 85
o Escherichia coli ECOR38 HEPCGN_04135 fliA RNA polymerase sigma factor FliA cofit 50 85
o Escherichia coli ECRC101 OKFHMN_25780 fliA RNA polymerase sigma factor FliA insig. 50 85
o Escherichia coli ECRC101 MCAODC_19610 fliA RNA polymerase sigma factor FliA insig. 50 85
o Escherichia coli ECRC102 NIAGMN_02270 fliA RNA polymerase sigma factor FliA no data 50 85
o Escherichia coli ECRC62 BNILDI_15190 fliA RNA polymerase sigma factor FliA insig. 50 85
o Escherichia coli ECRC98 JDDGAC_00370 fliA RNA polymerase sigma factor FliA no data 50 85
o Escherichia coli ECRC99 KEDOAH_02310 fliA RNA polymerase sigma factor FliA no data 50 85
o Escherichia coli Nissle 1917 ECOLIN_RS10975 RNA polymerase sigma factor FliA insig. 50 85
o Escherichia coli BW25113 b1922 fliA flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons (VIMSS) sig. 50 85
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01807 RNA polymerase sigma factor FliA insig. 50 85
o Ralstonia sp. UNC404CL21Col ABZR87_RS18040 RNA polymerase sigma factor FliA strong 44 89
o Enterobacter asburiae PDN3 EX28DRAFT_0625 RNA polymerase sigma factor, FliA/WhiG family cofit 50 85
o Enterobacter sp. TBS_079 MPMX20_02847 RNA polymerase sigma factor FliA strong 50 85
o Escherichia fergusonii Becca EFB2_02023 RNA polymerase sigma factor FliA insig. 49 85
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1690 RNA polymerase sigma factor for flagellar operon strong 49 85
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS17485 RNA polymerase sigma factor FliA insig. 44 89
o Ralstonia solanacearum UW163 UW163_RS21665 RNA polymerase sigma factor FliA insig. 44 89
o Erwinia tracheiphila SCR3 LU632_RS13785 RNA polymerase sigma factor FliA insig. 49 86
o Pantoea sp. MT58 IAI47_08160 RNA polymerase sigma factor FliA cofit 48 86
o Variovorax sp. SCN45 GFF5774 RNA polymerase sigma factor for flagellar operon insig. 43 85
o Ralstonia solanacearum PSI07 RPSI07_RS06165 RNA polymerase sigma factor FliA insig. 44 89
o Ralstonia solanacearum GMI1000 RS_RS23830 RNA polymerase sigma factor FliA insig. 43 89
o Dickeya dianthicola 67-19 HGI48_RS13350 RNA polymerase sigma factor FliA cofit 48 85
o Dickeya dianthicola ME23 DZA65_RS13835 RNA polymerase sigma factor FliA strong 48 85
o Castellaniella sp019104865 MT123 ABCV34_RS05605 RNA polymerase sigma factor FliA strong 47 87
o Cupriavidus basilensis FW507-4G11 RR42_RS35750 DNA-directed RNA polymerase sigma-70 factor insig. 49 86
o Dickeya dadantii 3937 DDA3937_RS13300 RNA polymerase sigma factor FliA strong 48 85
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1428 RNA polymerase sigma factor for flagellar operon insig. 42 86
o Serratia liquefaciens MT49 IAI46_15785 RNA polymerase sigma factor FliA insig. 48 85
o Rahnella sp. WP5 EX31_RS09450 RNA polymerase sigma factor FliA cofit 48 86
o Pectobacterium carotovorum WPP14 HER17_RS08355 RNA polymerase sigma factor FliA cofit 47 86
o Desulfovibrio vulgaris Miyazaki F DvMF_2011 RNA polymerase, sigma 28 subunit, FliA/WhiG (RefSeq) strong 42 87
o Desulfovibrio vulgaris Hildenborough JW710 DVU3229 fliA RNA polymerase sigma factor for flagellar operon FliA (TIGR) strong 40 85
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2081 RNA polymerase sigma factor, FliA/WhiG family cofit 39 84
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4065 RNA polymerase sigma factor for flagellar operon insig. 39 82
  Pseudomonas stutzeri RCH2 Psest_4160 RNA polymerase sigma factor, FliA/WhiG family insig. 38 81
  Erwinia tracheiphila SCR3 LU632_RS20475 FliA/WhiG family RNA polymerase sigma factor no data 33 86
  Acinetobacter radioresistens SK82 MPMX26_00713 RNA polymerase sigma factor RpoD no data 31 86
  Marinobacter adhaerens HP15 HP15_315 RNA polymerase, sigma 70 subunit, RpoD no data 30 86
  Rhodopseudomonas palustris CGA009 TX73_006610 RNA polymerase sigma factor RpoD no data 28 95
  Synechococcus elongatus PCC 7942 Synpcc7942_0649 rpoD1 RNA polymerase sigma factor RpoD no data 29 85
  Dickeya dadantii 3937 DDA3937_RS02945 RNA polymerase sigma factor RpoD no data 29 86
  Dickeya dianthicola 67-19 HGI48_RS03110 RNA polymerase sigma factor RpoD no data 29 86
  Dickeya dianthicola ME23 DZA65_RS03105 RNA polymerase sigma factor RpoD no data 29 86
  Klebsiella michiganensis M5al BWI76_RS24555 RNA polymerase sigma factor RpoD no data 29 86
  Pantoea sp. MT58 IAI47_03050 RNA polymerase sigma factor RpoD no data 29 86
  Erwinia tracheiphila SCR3 LU632_RS20725 rpoD RNA polymerase sigma factor RpoD no data 29 86
  Pectobacterium carotovorum WPP14 HER17_RS18415 RNA polymerase sigma factor RpoD no data 29 86
  Rahnella sp. WP5 EX31_RS08195 RNA polymerase sigma factor RpoD no data 29 86
  Escherichia coli BL21 ECD_02937 RNA polymerase, sigma 70 (sigma D) factor no data 29 86
  Escherichia fergusonii Becca EFB2_00744 RNA polymerase sigma factor RpoD no data 29 86
  Escherichia coli ECOR27 NOLOHH_10445 rpoD RNA polymerase sigma factor RpoD no data 29 86
  Escherichia coli ECOR38 HEPCGN_17510 rpoD RNA polymerase sigma factor RpoD no data 29 86
  Escherichia coli ECRC101 OKFHMN_18655 rpoD RNA polymerase sigma factor RpoD no data 29 86
  Escherichia coli ECRC101 MCAODC_09170 rpoD RNA polymerase sigma factor RpoD no data 29 86
  Escherichia coli ECRC102 NIAGMN_16420 rpoD RNA polymerase sigma factor RpoD no data 29 86
  Escherichia coli ECRC62 BNILDI_01070 rpoD RNA polymerase sigma factor RpoD no data 29 86
  Escherichia coli ECRC98 JDDGAC_22290 rpoD RNA polymerase sigma factor RpoD no data 29 86
  Escherichia coli ECRC99 KEDOAH_09490 rpoD RNA polymerase sigma factor RpoD no data 29 86
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00635 RNA polymerase sigma factor RpoD no data 29 86
  Enterobacter asburiae PDN3 EX28DRAFT_3102 RNA polymerase, sigma 70 subunit, RpoD no data 29 86
  Enterobacter sp. TBS_079 MPMX20_03909 RNA polymerase sigma factor RpoD no data 29 86
  Escherichia coli BW25113 b3067 rpoD RNA polymerase sigma factor (NCBI) no data 29 86
  Serratia liquefaciens MT49 IAI46_22125 RNA polymerase sigma factor RpoD no data 29 86
  Shewanella amazonensis SB2B Sama_0823 RNA polymerase sigma-70 factor (RefSeq) no data 28 86