Homologs of ABIE53_001028 from Paraburkholderia graminis OAS925

hopanoid biosynthesis associated radical SAM protein HpnJ
SEED: Fe-S oxidoreductase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Paraburkholderia graminis OAS925 ABIE53_001028 hopanoid biosynthesis associated radical SAM protein HpnJ insig. 100 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01152 hopanoid biosynthesis associated radical SAM protein HpnJ no data 96 100
o Burkholderia phytofirmans PsJN BPHYT_RS10915 radical SAM protein insig. 96 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS21480 hopanoid biosynthesis associated radical SAM protein HpnJ insig. 92 100
  Paraburkholderia sabiae LMG 24235 QEN71_RS35045 hopanoid biosynthesis associated radical SAM protein HpnJ insig. 91 100
o Cupriavidus basilensis FW507-4G11 RR42_RS35285 hopanoid biosynthesis associated radical SAM protein HpnJ insig. 86 100
o Magnetospirillum magneticum AMB-1 AMB_RS17625 hopanoid biosynthesis associated radical SAM protein HpnJ strong 61 99
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13125 B12-binding domain-containing radical SAM protein insig. 37 97
  Magnetospirillum magneticum AMB-1 AMB_RS00595 B12-binding domain-containing radical SAM protein cofit 28 80
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04385 radical SAM protein insig. 26 74
  Magnetospirillum magneticum AMB-1 AMB_RS19185 radical SAM protein insig. 25 67
  Desulfovibrio vulgaris Hildenborough JW710 DVU3019 radical SAM/B12 binding domain protein (TIGR) sig. 26 66
  Magnetospirillum magneticum AMB-1 AMB_RS04045 B12-binding domain-containing radical SAM protein cofit 28 67
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3316 Fe-S oxidoreductase insig. 31 40
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04380 radical SAM protein insig. 28 54
  Rhodospirillum rubrum S1H Rru_A0762 Fe-S oxidoreductase (NCBI) insig. 28 62
  Rhodanobacter sp. FW510-T8 OKGIIK_14710 B12-binding domain-containing radical SAM protein insig. 26 70
  Rhodanobacter denitrificans MT42 LRK55_RS04900 radical SAM protein insig. 24 72
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05120 B12-binding domain-containing radical SAM protein insig. 24 72
  Desulfovibrio vulgaris Hildenborough JW710 DVU3016 B12 binding domain protein/radical SAM domain protein (TIGR) insig. 27 49
  Rhodopseudomonas palustris CGA009 TX73_008575 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase no data 25 92
  Rhodopseudomonas palustris CGA009 TX73_018400 radical SAM protein insig. 26 70
  Rhodospirillum rubrum S1H Rru_A3548 Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase (NCBI) strong 24 93
  Herbaspirillum seropedicae SmR1 HSERO_RS01495 Fe-S osidoreductase insig. 23 76
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS04700 radical SAM protein insig. 23 70
  Magnetospirillum magneticum AMB-1 AMB_RS00435 B12-binding domain-containing radical SAM protein cofit 28 41
  Methanococcus maripaludis JJ MMJJ_RS07390 TIGR04014 family B12-binding domain/radical SAM domain-containing protein sig. 27 42
  Methanococcus maripaludis S2 MMP_RS06965 TIGR04014 family B12-binding domain/radical SAM domain-containing protein strong 26 42
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05095 B12-binding domain-containing radical SAM protein insig. 29 41
  Bosea sp. OAE506 ABIE41_RS13985 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase insig. 23 87
  Rhodanobacter denitrificans MT42 LRK55_RS04875 radical SAM protein insig. 29 41
  Rhodanobacter sp. FW510-T8 OKGIIK_14675 Mg-protoporphyrin IX monomethyl ester oxidative cyclase insig. 29 41
  Mycobacterium tuberculosis H37Rv Rv0213c Possible methyltransferase (methylase) insig. 25 52
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3163.1 Radical SAM domain protein insig. 30 41
  Paraburkholderia sabiae LMG 24235 QEN71_RS16605 hopanoid C-3 methylase HpnR insig. 27 60
  Synechococcus elongatus PCC 7942 Synpcc7942_0799 Elongator protein 3 no data 23 50
  Dinoroseobacter shibae DFL-12 Dshi_2637 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase (RefSeq) insig. 23 93
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS05340 B12-binding domain-containing radical SAM protein insig. 27 40
  Bosea sp. OAE506 ABIE41_RS15895 30S ribosomal protein S12 methylthiotransferase RimO insig. 26 41
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS04680 radical SAM protein insig. 27 41
  Castellaniella sp019104865 MT123 ABCV34_RS14230 30S ribosomal protein S12 methylthiotransferase RimO cofit 23 73
  Ralstonia sp. UNC404CL21Col ABZR87_RS07780 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 24 76
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS01815 30S ribosomal protein S12 methylthiotransferase RimO insig. 24 39
  Methanococcus maripaludis JJ MMJJ_RS05200 TIGR04013 family B12-binding domain/radical SAM domain-containing protein insig. 25 47
  Methanococcus maripaludis S2 MMP_RS00285 TIGR04013 family B12-binding domain/radical SAM domain-containing protein insig. 28 47
  Kangiella aquimarina DSM 16071 B158DRAFT_2522 SSU ribosomal protein S12P methylthiotransferase (EC 2.-.-.-) insig. 27 40
  Shewanella amazonensis SB2B Sama_0485 MiaB-like putative RNA modifying enzyme YliG (RefSeq) insig. 27 41
  Ralstonia solanacearum PSI07 RPSI07_RS21380 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 23 62
  Pseudomonas stutzeri RCH2 Psest_2632 ribosomal protein S12 methylthiotransferase RimO sig. 25 48
  Fusobacterium nucleatum SB010 HUW76_03495 B12-binding domain-containing radical SAM protein strong 24 56
  Bifidobacterium breve UCC2003 BBR_RS16570 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 25 37
  Ralstonia solanacearum GMI1000 RS_RS02645 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 23 62
  Shewanella sp. ANA-3 Shewana3_3627 MiaB-like tRNA modifying enzyme YliG (RefSeq) sig. 26 41
  Klebsiella michiganensis M5al BWI76_RS09115 30S ribosomal protein S12 methylthiotransferase RimO sig. 25 69
  Shewanella oneidensis MR-1 SO4072 yliG MiaB-like putative RNA modifying enzyme YliG (NCBI ptt file) sig. 26 41
  Pseudomonas sp. RS175 PFR28_03848 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase insig. 24 42
  Paraburkholderia sabiae LMG 24235 QEN71_RS22185 30S ribosomal protein S12 methylthiotransferase RimO strong 23 69
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5018 tRNA-i(6)A37 methylthiotransferase sig. 26 36
  Rhizobium sp. OAE497 ABIE40_RS01955 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase insig. 24 68
  Pseudomonas fluorescens FW300-N2C3 AO356_15410 (dimethylallyl)adenosine tRNA methylthiotransferase insig. 26 36
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS17135 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 24 39
  Bacteroides stercoris CC31F HMPREF1181_RS16335 30S ribosomal protein S12 methylthiotransferase RimO insig. 21 40
  Pseudomonas fluorescens SBW25 PFLU_RS26555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 26 36
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB sig. 26 36
  Synechococcus elongatus PCC 7942 Synpcc7942_2512 hypothetical protein strong 23 39
  Castellaniella sp019104865 MT123 ABCV34_RS15345 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 22 59
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF731 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase insig. 26 46
  Pseudomonas simiae WCS417 PS417_24625 (dimethylallyl)adenosine tRNA methylthiotransferase sig. 26 36
  Pseudomonas syringae pv. syringae B728a Psyr_1392 SSU ribosomal protein S12P methylthiotransferase insig. 23 74
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1392 SSU ribosomal protein S12P methylthiotransferase insig. 23 74
  Burkholderia phytofirmans PsJN BPHYT_RS09170 ribosomal protein S12 methylthiotransferase RimO no data 23 69
  Marinobacter adhaerens HP15 HP15_1760 oxygen-independent coproporphyrinogen III oxidase, Fe-S oxidoreductase insig. 29 37
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2712 tRNA-i(6)A37 methylthiotransferase sig. 26 41
  Pseudomonas fluorescens FW300-N2E3 AO353_06375 (dimethylallyl)adenosine tRNA methylthiotransferase sig. 24 47
  Rhizobium sp. OAE497 ABIE40_RS13920 radical SAM protein cofit 22 67
  Magnetospirillum magneticum AMB-1 AMB_RS16460 B12-binding domain-containing radical SAM protein insig. 25 59
  Escherichia coli BL21 ECD_00802 ribosomal protein S12 methylthiotransferase insig. 27 41
  Escherichia coli ECOR27 NOLOHH_22430 rimO 30S ribosomal protein S12 methylthiotransferase RimO cofit 27 41
  Escherichia coli ECOR38 HEPCGN_01970 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 27 41
  Escherichia coli ECRC101 MCAODC_25275 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 27 41
  Escherichia coli ECRC102 NIAGMN_04105 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 27 41
  Escherichia coli ECRC62 BNILDI_20690 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 27 41
  Escherichia coli ECRC98 JDDGAC_09695 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 27 41
  Escherichia coli ECRC99 KEDOAH_21850 rimO 30S ribosomal protein S12 methylthiotransferase RimO no data 27 41
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02875 Ribosomal protein S12 methylthiotransferase RimO insig. 27 41
  Escherichia coli BW25113 b0835 yliG predicted SAM-dependent methyltransferase (NCBI) insig. 27 41
  Pseudomonas sp. S08-1 OH686_18875 ribosomal protein S12 methylthiotransferase RimO cofit 25 47
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00855 SSU ribosomal protein S12P methylthiotransferase insig. 22 69
  Rhodopseudomonas palustris CGA009 TX73_019410 DUF4070 domain-containing protein insig. 22 58
  Rhodospirillum rubrum S1H Rru_A3046 Radical SAM (NCBI) insig. 25 43
  Rhodanobacter denitrificans MT42 LRK55_RS01560 30S ribosomal protein S12 methylthiotransferase RimO cofit 23 40
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS01780 30S ribosomal protein S12 methylthiotransferase RimO cofit 23 40
  Paraburkholderia graminis OAS925 ABIE53_002068 ribosomal protein S12 methylthiotransferase insig. 22 69
  Bacteroides thetaiotaomicron VPI-5482 BT0913 putative Fe-S oxidoreductase (NCBI ptt file) sig. 22 41
  Pseudomonas stutzeri RCH2 Psest_0532 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB sig. 26 36
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS11825 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 25 42
  Ralstonia solanacearum UW163 UW163_RS01760 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 25 42
  Escherichia fergusonii Becca EFB2_03271 Ribosomal protein S12 methylthiotransferase RimO insig. 27 41
  Escherichia coli Nissle 1917 ECOLIN_RS04440 30S ribosomal protein S12 methylthiotransferase RimO no data 27 41
  Enterobacter sp. TBS_079 MPMX20_01473 Ribosomal protein S12 methylthiotransferase RimO insig. 25 69