Homologs of Shew_2487 from Shewanella loihica PV-4

histone deacetylase superfamily protein (RefSeq)
SEED: Histone deacetylase/AcuC/AphA family protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_2487 histone deacetylase superfamily protein (RefSeq) insig. 100 100
o Shewanella oneidensis MR-1 SO1815 histone deacetylase/AcuC/AphA family protein (NCBI ptt file) strong 59 100
o Shewanella sp. ANA-3 Shewana3_2634 histone deacetylase superfamily protein (RefSeq) insig. 59 100
o Shewanella amazonensis SB2B Sama_1245 histone deacetylase/AcuC/AphA family protein (RefSeq) insig. 52 100
o Alteromonas macleodii MIT1002 MIT1002_02776 Acetoin utilization protein AcuC insig. 50 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_10215 histone deacetylase insig. 50 99
o Pseudomonas sp. S08-1 OH686_15985 deacetylase cofit 46 100
o Pseudomonas stutzeri RCH2 Psest_3501 Deacetylases, including yeast histone deacetylase and acetoin utilization protein insig. 45 100
o Pseudomonas syringae pv. syringae B728a Psyr_4295 Histone deacetylase superfamily insig. 43 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4295 Histone deacetylase superfamily insig. 43 100
o Pseudomonas fluorescens FW300-N2E3 AO353_06255 histone deacetylase superfamily protein insig. 44 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2738 Deacetylases, including yeast histone deacetylase and acetoin utilization protein insig. 44 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1411 Deacetylases, including yeast histone deacetylase and acetoin utilization protein insig. 43 100
o Pseudomonas sp. DMC3 GFF3926 hypothetical protein insig. 43 100
o Pseudomonas sp. BP01 JOY50_RS21835 histone deacetylase insig. 45 96
o Pseudomonas simiae WCS417 PS417_24490 hypothetical protein sig. 43 100
o Pseudomonas sp. SVBP6 COO64_RS15380 histone deacetylase insig. 45 96
o Pseudomonas fluorescens SBW25 PFLU_RS26415 histone deacetylase insig. 42 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS26415 histone deacetylase sig. 42 100
o Synechococcus elongatus PCC 7942 Synpcc7942_1393 histone deacetylase/AcuC/AphA family protein-like insig. 43 100
o Pseudomonas sp. RS175 PFR28_03823 hypothetical protein sig. 43 100
o Pseudomonas putida KT2440 PP_4764 Histone deacetylase family protein insig. 44 96
o Pseudomonas fluorescens FW300-N2C3 AO356_15540 histone deacetylase superfamily protein sig. 43 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5048 Deacetylases, including yeast histone deacetylase and acetoin utilization protein insig. 42 100
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS15620 histone deacetylase insig. 42 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0328 Deacetylases, including yeast histone deacetylase and acetoin utilization protein insig. 41 98
o Caulobacter crescentus NA1000 CCNA_03763 deacetylase insig. 42 96
o Caulobacter crescentus NA1000 Δfur CCNA_03763 deacetylase cofit 42 96
o Cellulophaga baltica 18 M666_RS06695 histone deacetylase insig. 38 100
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3294 Deacetylases, including yeast histone deacetylase and acetoin utilization protein insig. 37 100
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS09790 histone deacetylase insig. 39 97
o Cupriavidus basilensis FW507-4G11 RR42_RS07390 deacetylase insig. 39 98
o Ralstonia solanacearum PSI07 RPSI07_RS15845 histone deacetylase insig. 40 98
o Herbaspirillum seropedicae SmR1 HSERO_RS08155 deacetylase insig. 40 96
o Ralstonia sp. UNC404CL21Col ABZR87_RS13440 histone deacetylase insig. 39 97
o Ralstonia solanacearum GMI1000 RS_RS08085 histone deacetylase insig. 40 97
o Variovorax sp. OAS795 ABID97_RS10570 histone deacetylase insig. 39 96
o Variovorax sp. SCN45 GFF2874 Deacetylases, including yeast histone deacetylase and acetoin utilization protein insig. 39 96
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09305 histone deacetylase insig. 36 100
o Acidovorax sp. GW101-3H11 Ac3H11_2603 Deacetylases, including yeast histone deacetylase and acetoin utilization protein insig. 40 93
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_16250 histone deacetylase insig. 36 96
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3830 Deacetylases, including yeast histone deacetylase and acetoin utilization protein insig. 38 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS01640 histone deacetylase insig. 39 100
o Ralstonia solanacearum UW163 UW163_RS14950 histone deacetylase insig. 39 100
o Dechlorosoma suillum PS Dsui_2897 deacetylase, histone deacetylase/acetoin utilization protein no data 40 98
o Azospirillum brasilense Sp245 AZOBR_RS07890 acetoin utilization protein insig. 29 84
o Azospirillum sp. SherDot2 MPMX19_04456 Histone deacetylase-like amidohydrolase insig. 27 92
  Rhizobium sp. OAE497 ABIE40_RS03940 histone deacetylase family protein insig. 32 68
  Agrobacterium fabrum C58 Atu0748 deacetylase insig. 32 57
  Azospirillum brasilense Sp245 AZOBR_RS20785 acetoin utilization protein insig. 30 53
  Synechocystis sp000284455 PCC 6803 SGL_RS02545 histone deacetylase insig. 31 44
  Magnetospirillum magneticum AMB-1 AMB_RS14595 acetoin utilization protein insig. 29 58
  Azospirillum sp. SherDot2 MPMX19_05063 Histone deacetylase-like amidohydrolase insig. 29 53
  Rhodospirillum rubrum S1H Rru_A2616 Histone deacetylase superfamily (NCBI) cofit 29 59
  Sinorhizobium meliloti 1021 SMc00969 hypothetical protein insig. 30 56
  Bosea sp. OAE506 ABIE41_RS10180 histone deacetylase family protein insig. 30 66
  Castellaniella sp019104865 MT123 ABCV34_RS07045 histone deacetylase family protein insig. 30 53
  Rhodopseudomonas palustris CGA009 TX73_004915 histone deacetylase family protein strong 30 65
  Alteromonas macleodii MIT1002 MIT1002_00138 Histone deacetylase-like amidohydrolase strong 32 53
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS09710 histone deacetylase family protein insig. 29 54
  Pseudomonas sp. BP01 JOY50_RS12885 class II histone deacetylase insig. 27 69
o Marinobacter adhaerens HP15 HP15_1219 histone deacetylase/AcuC/AphA family protein insig. 27 53
  Xanthobacter sp. DMC5 GFF3267 Histone deacetylase-like amidohydrolase insig. 30 66
  Serratia liquefaciens MT49 IAI46_02680 class II histone deacetylase insig. 27 78
  Pseudomonas aeruginosa PA14 IKLFDK_19435 Histone deacetylase-like amidohydrolase insig. 27 54
  Azospirillum brasilense Sp245 AZOBR_RS23045 acetylpolyamine aminohydrolase sig. 28 53
  Phaeobacter inhibens DSM 17395 PGA1_c32070 Deacetylases, including yeast histone deacetylase and acetoin utilization protein insig. 25 65
  Paraburkholderia graminis OAS925 ABIE53_003142 acetoin utilization deacetylase AcuC-like enzyme strong 29 53
  Phaeobacter inhibens DSM 17395 PGA1_c34140 histone deacetylase insig. 31 53
  Paraburkholderia sabiae LMG 24235 QEN71_RS37020 histone deacetylase family protein insig. 28 54
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS16170 histone deacetylase family protein insig. 28 52
  Pseudomonas sp. BP01 JOY50_RS06845 histone deacetylase family protein insig. 27 58
  Burkholderia phytofirmans PsJN BPHYT_RS14835 deacetylase sig. 29 44
  Paraburkholderia sabiae LMG 24235 QEN71_RS04145 histone deacetylase family protein cofit 28 52
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03909 Acetoin utilization deacetylase AcuC strong 27 52
  Pseudomonas simiae WCS417 PS417_07215 acetylpolyamine aminohydrolase insig. 26 73
  Dinoroseobacter shibae DFL-12 Dshi_2054 histone deacetylase superfamily (RefSeq) insig. 26 56
  Dechlorosoma suillum PS Dsui_1976 deacetylase, histone deacetylase/acetoin utilization protein sig. 25 70
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05496 Acetoin utilization deacetylase AcuC insig. 30 54
  Cupriavidus basilensis FW507-4G11 RR42_RS27390 acetylpolyamine aminohydrolase insig. 28 53
  Azospirillum sp. SherDot2 MPMX19_01126 Acetoin utilization protein AcuC insig. 26 75
  Variovorax sp. SCN45 GFF6922 Deacetylases, including yeast histone deacetylase and acetoin utilization protein insig. 26 59
  Ralstonia solanacearum PSI07 RPSI07_RS19635 deacetylase insig. 27 52
  Pseudomonas fluorescens SBW25 PFLU_RS14650 class II histone deacetylase insig. 27 54
  Pseudomonas fluorescens SBW25-INTG PFLU_RS14650 class II histone deacetylase insig. 27 54
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS11245 histone deacetylase family protein insig. 31 52
  Ralstonia sp. UNC404CL21Col ABZR87_RS09525 histone deacetylase family protein strong 29 43
  Ralstonia solanacearum GMI1000 RS_RS04570 deacetylase sig. 27 53
  Azospirillum sp. SherDot2 MPMX19_02831 Acetylpolyamine amidohydrolase insig. 28 53
  Synechococcus elongatus PCC 7942 Synpcc7942_2124 bcp acetylpolyamine aminohydolase strong 27 53
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05489 Acetoin utilization deacetylase AcuC insig. 24 92
  Pseudomonas simiae WCS417 PS417_13965 acetoin utilization protein insig. 27 79
  Marinobacter adhaerens HP15 HP15_3614 histone deacetylase superfamily insig. 26 77
  Desulfovibrio vulgaris Hildenborough JW710 DVU2139 aphA histone deacetylase family protein (TIGR) cofit 28 71
  Rhizobium sp. OAE497 ABIE40_RS01070 histone deacetylase family protein insig. 26 53
  Cupriavidus basilensis FW507-4G11 RR42_RS21385 acetylpolyamine aminohydrolase insig. 27 66
  Marinobacter adhaerens HP15 HP15_3405 histone deacetylase superfamily insig. 25 58
  Marinobacter adhaerens HP15 HP15_1414 histone deacetylase superfamily protein insig. 30 53
  Variovorax sp. SCN45 GFF2662 Deacetylases, including yeast histone deacetylase and acetoin utilization protein insig. 27 53
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS13835 deacetylase insig. 27 43