Homologs of BT3269 from Bacteroides thetaiotaomicron VPI-5482

RNA polymerase ECF-type sigma factor (NCBI ptt file)
SEED: RNA polymerase sigma-70 factor

250 hits from BLASTp (E < 0.01)

Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Bacteroides thetaiotaomicron VPI-5482	BT3269		RNA polymerase ECF-type sigma factor (NCBI ptt file)	sig.	100	100
o	Bacteroides ovatus ATCC 8483	BACOVA_00883		RNA polymerase sigma-70 factor	insig.	76	99
	Bacteroides thetaiotaomicron VPI-5482	BT3277		RNA polymerase ECF-type sigma factor (NCBI ptt file)	sig.	31	97
	Bacteroides ovatus ATCC 8483	BACOVA_05151		RNA polymerase sigma-70 factor	insig.	29	95
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS12920		RNA polymerase sigma-70 factor	cofit	30	93
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_1974		RNA polymerase sigma-70 factor, Bacteroides expansion family 1	insig.	32	87
	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_11515		RNA polymerase sigma-70 factor	insig.	29	97
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_3656		RNA polymerase sigma-70 factor, Bacteroides expansion family 1	insig.	30	86
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_1381		RNA polymerase sigma-70 factor, Bacteroides expansion family 1	insig.	31	87
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS04910		RNA polymerase sigma-70 factor	insig.	32	89
	Bacteroides ovatus ATCC 8483	BACOVA_00284		RNA polymerase sigma-70 factor	insig.	31	91
	Bacteroides ovatus ATCC 8483	BACOVA_05457		RNA polymerase sigma-70 factor	insig.	29	89
	Bacteroides ovatus ATCC 8483	BACOVA_04151		RNA polymerase sigma-70 factor	strong	30	92
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_3485		RNA polymerase sigma-70 factor, Bacteroides expansion family 1	insig.	36	81
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS05665		RNA polymerase sigma-70 factor	insig.	31	84
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS10800		RNA polymerase sigma-70 factor	insig.	36	69
	Phocaeicola dorei CL03T12C01	ABI39_RS06270		RNA polymerase sigma-70 factor	insig.	35	69
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_4205		RNA polymerase sigma-70 factor, Bacteroides expansion family 1	insig.	29	97
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS05630		RNA polymerase sigma-70 factor	sig.	33	78
	Azospirillum sp. SherDot2	MPMX19_00764		ECF RNA polymerase sigma factor EcfG	insig.	31	83
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS11705		hypothetical protein	insig.	31	85
	Bacteroides ovatus ATCC 8483	BACOVA_00842		RNA polymerase sigma-70 factor	insig.	28	96
	Phocaeicola dorei CL03T12C01	ABI39_RS10155		RNA polymerase sigma-70 factor	insig.	26	92
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS12340		RNA polymerase sigma-70 factor	cofit	31	83
	Phocaeicola dorei CL03T12C01	ABI39_RS12275		RNA polymerase sigma-70 factor	insig.	29	87
	Bacteroides thetaiotaomicron VPI-5482	BT1877		RNA polymerase ECF-type sigma factor (NCBI ptt file)	strong	28	100
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS04080		RNA polymerase sigma-70 factor	insig.	28	92
	Cellulophaga baltica 18	M666_RS05355		sigma-70 family RNA polymerase sigma factor	insig.	32	86
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS16435		RNA polymerase sigma-70 factor	strong	29	87
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_2047		RNA polymerase sigma factor, sigma-70 family	strong	29	89
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS00265		RNA polymerase sigma-70 factor	insig.	30	96
	Bacteroides thetaiotaomicron VPI-5482	BT4643		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	26	91
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS09110		RNA polymerase sigma-70 factor	sig.	31	79
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS11095		hypothetical protein	insig.	28	92
	Phocaeicola dorei CL03T12C01	ABI39_RS10065		sigma-70 family RNA polymerase sigma factor	insig.	31	89
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS20645		RNA polymerase subunit sigma-70	insig.	31	93
	Bacteroides ovatus ATCC 8483	BACOVA_00098		RNA polymerase sigma-70 factor	insig.	29	93
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS14445		sigma-70 family RNA polymerase sigma factor	insig.	31	89
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS13700		hypothetical protein	insig.	29	96
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS02700		RNA polymerase sigma-70 factor	insig.	29	91
	Collimonas humicola GW821-FHT01A05	MPMX01_01551		RNA polymerase sigma-H factor	no data	31	91
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS17460		RNA polymerase sigma-70 factor	insig.	26	99
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS00590		RNA polymerase sigma-70 factor	insig.	28	94
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_2168		RNA polymerase sigma-70 factor, Bacteroides expansion family 1	insig.	27	96
	Shewanella oneidensis MR-1	SO3840		RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file)	insig.	27	93
	Bacteroides ovatus ATCC 8483	BACOVA_02944		RNA polymerase sigma-70 factor	insig.	27	89
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_4566		RNA polymerase sigma-70 factor, Bacteroides expansion family 1	insig.	29	96
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS11460		hypothetical protein	insig.	29	87
	Bacteroides ovatus ATCC 8483	BACOVA_02951		RNA polymerase sigma-70 factor	insig.	27	100
	Bacteroides ovatus ATCC 8483	BACOVA_04866		RNA polymerase sigma-70 factor	insig.	27	83
	Shewanella sp. ANA-3	Shewana3_0763		ECF subfamily RNA polymerase sigma-24 factor (RefSeq)	insig.	27	93
	Shewanella loihica PV-4	Shew_2956		ECF subfamily RNA polymerase sigma-24 factor (RefSeq)	insig.	27	89
	Phocaeicola dorei CL03T12C01	ABI39_RS01635		RNA polymerase sigma-70 factor	insig.	28	95
	Phocaeicola dorei CL03T12C01	ABI39_RS10300		RNA polymerase sigma-70 factor	sig.	27	99
	Azospirillum brasilense Sp245	AZOBR_RS06360		RNA polymerase subunit sigma-24	no data	29	83
	Cellulophaga baltica 18	M666_RS01775		RNA polymerase sigma-70 factor	insig.	27	81
	Lysobacter sp. OAE881	ABIE51_RS16295		sigma-70 family RNA polymerase sigma factor	insig.	26	87
	Bacteroides ovatus ATCC 8483	BACOVA_04399		Sigma-70 region 2	insig.	34	80
	Pseudomonas syringae pv. syringae B728a	Psyr_0892		Sigma-70 region 2:Sigma-70 region 4	insig.	27	92
	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_0892		Sigma-70 region 2:Sigma-70 region 4	insig.	27	92
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS13360		RNA polymerase sigma-70 factor	insig.	26	97
	Bacteroides thetaiotaomicron VPI-5482	BT3993		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	26	84
	Cupriavidus basilensis FW507-4G11	RR42_RS14080		RNA polymerase sigma factor RpoE	strong	29	93
	Herbaspirillum seropedicae SmR1	HSERO_RS16195		RNA polymerase sigma factor	insig.	29	89
	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_00665		RNA polymerase subunit sigma-24	strong	27	92
	Rhodanobacter sp000427505 FW510-R12	LRK53_RS04580		sigma-70 family RNA polymerase sigma factor	insig.	30	94
	Phocaeicola dorei CL03T12C01	ABI39_RS03415		RNA polymerase sigma-70 factor	insig.	29	81
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS00770		RNA polymerase sigma-70 factor	sig.	28	91
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS07135		RNA polymerase sigma factor	insig.	27	91
	Bacteroides thetaiotaomicron VPI-5482	BT3010		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	26	96
	Caulobacter crescentus NA1000	CCNA_02837		RNA polymerase ECF-type sigma factor	insig.	25	93
	Caulobacter crescentus NA1000 Δfur	CCNA_02837		RNA polymerase ECF-type sigma factor	cofit	25	93
	Bacteroides ovatus ATCC 8483	BACOVA_02037		RNA polymerase sigma-70 factor	insig.	24	98
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS12095		RNA polymerase subunit sigma-70	insig.	27	91
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS10380		RNA polymerase subunit sigma-70	insig.	28	92
	Bacteroides stercoris CC31F	HMPREF1181_RS06050		RNA polymerase sigma-70 factor	insig.	28	83
	Bacteroides thetaiotaomicron VPI-5482	BT4070		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	27	83
	Rhodanobacter denitrificans MT42	LRK55_RS16655		RNA polymerase sigma factor RpoE	no data	28	91
	Rhodanobacter denitrificans FW104-10B01	LRK54_RS16940		RNA polymerase sigma factor RpoE	strong	28	91
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS15190		RNA polymerase sigma-70 factor	insig.	24	88
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS02390		RNA polymerase sigma-70 factor	sig.	27	95
	Pseudomonas stutzeri RCH2	Psest_3456		RNA polymerase sigma factor, sigma-70 family	insig.	29	77
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS13970		RNA polymerase sigma factor	cofit	29	78
	Bacteroides stercoris CC31F	HMPREF1181_RS01060		RNA polymerase sigma-70 factor	insig.	27	91
	Rhodanobacter sp. FW510-T8	OKGIIK_07900	rpoE	RNA polymerase sigma factor RpoE	strong	28	91
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS12735		RNA polymerase subunit sigma-70	insig.	28	71
	Rhodanobacter sp000427505 FW510-R12	LRK53_RS12005		RNA polymerase sigma factor RpoE	no data	27	91
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_4324		RNA polymerase sigma-70 factor, Bacteroides expansion family 1	insig.	30	79
	Phocaeicola dorei CL03T12C01	ABI39_RS00860		RNA polymerase sigma-70 factor	insig.	27	97
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS11895		hypothetical protein	insig.	26	96
	Phocaeicola dorei CL03T12C01	ABI39_RS18115		RNA polymerase sigma-70 factor	insig.	25	92
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_1733		RNA polymerase sigma factor, sigma-70 family	insig.	29	92
	Bacteroides stercoris CC31F	HMPREF1181_RS10020		RNA polymerase sigma-70 factor	cofit	27	89
	Burkholderia phytofirmans PsJN	BPHYT_RS14405		RNA polymerase sigma factor RpoE	no data	27	93
	Paraburkholderia graminis OAS925	ABIE53_003043		RNA polymerase sigma-70 factor (ECF subfamily)	strong	27	93
	Bacteroides thetaiotaomicron VPI-5482	BT1617		RNA polymerase ECF-type sigma factor (NCBI ptt file)	sig.	24	89
	Alteromonas macleodii MIT1002	MIT1002_03807		Sigma-W factor	insig.	24	88
	Herbaspirillum seropedicae SmR1	HSERO_RS09625		RNA polymerase sigma factor RpoE	no data	29	91
	Rhodanobacter denitrificans MT42	LRK55_RS05200		sigma-70 family RNA polymerase sigma factor	insig.	28	94
	Rhodanobacter denitrificans FW104-10B01	LRK54_RS05425		sigma-70 family RNA polymerase sigma factor	insig.	28	94
	Marinobacter adhaerens HP15	HP15_p187g100		RNA polymerase sigma factor	insig.	30	74
	Bacteroides ovatus ATCC 8483	BACOVA_05174		RNA polymerase sigma-70 factor	insig.	29	91
	Phocaeicola dorei CL03T12C01	ABI39_RS08655		RNA polymerase sigma-70 factor	insig.	27	90
	Paraburkholderia sabiae LMG 24235	QEN71_RS04575		RNA polymerase sigma factor RpoE	strong	27	93
	Bacteroides thetaiotaomicron VPI-5482	BT2198		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	27	89
	Alteromonas macleodii MIT1002	MIT1002_00882		Sigma-W factor	insig.	26	85
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS03570		RNA polymerase sigma-70 factor	insig.	25	92
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS06675		RNA polymerase sigma-70 factor	insig.	31	68
	Bacteroides ovatus ATCC 8483	BACOVA_00771		RNA polymerase sigma-70 factor	insig.	28	79
	Cellulophaga baltica 18	M666_RS04155		sigma-70 family RNA polymerase sigma factor	insig.	29	87
	Ralstonia sp. UNC404CL21Col	ABZR87_RS10165		RNA polymerase sigma factor RpoE	strong	27	93
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_1926		RNA polymerase sigma-70 factor, Bacteroides expansion family 1	insig.	26	97
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_04355		RNA polymerase, sigma-24 subunit, RpoE	no data	26	91
	Ralstonia solanacearum IBSBF1503	RALBFv3_RS14445		RNA polymerase sigma factor RpoE	strong	28	93
	Ralstonia solanacearum GMI1000	RS_RS05225		RNA polymerase sigma factor RpoE	strong	28	93
	Ralstonia solanacearum PSI07	RPSI07_RS19015		RNA polymerase sigma factor RpoE	strong	28	93
	Ralstonia solanacearum UW163	UW163_RS11910		RNA polymerase sigma factor RpoE	insig.	28	93
	Collimonas humicola GW821-FHT01A05	MPMX01_02578		ECF RNA polymerase sigma factor SigF	insig.	28	89
	Bacteroides thetaiotaomicron VPI-5482	BT4250		RNA polymerase ECF-type sigma factor (NCBI ptt file)	sig.	27	92
	Alteromonas macleodii MIT1002	MIT1002_04051		Sigma-24	insig.	27	71
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_2852		RNA polymerase sigma-70 factor, Bacteroides expansion family 1	strong	27	83
	Pseudomonas protegens RBAN4	FABNJH_05120		RNA polymerase sigma factor	insig.	30	68
	Dyella japonica UNC79MFTsu3.2	ABZR86_RS07040		RNA polymerase sigma factor	insig.	28	93
	Klebsiella pneumoniae MKP103	KDGMDA_28480		RNA polymerase sigma factor RpoE	no data	28	91
	Klebsiella pneumoniae MRSN742743	GJGHJB_01209	rpoE	RNA polymerase sigma factor RpoE	no data	28	91
	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_06740		hypothetical protein	insig.	28	80
	Pseudomonas sp. BP01	JOY50_RS12975		sigma-70 family RNA polymerase sigma factor	insig.	26	89
	Klebsiella michiganensis M5al	BWI76_RS21355		RNA polymerase sigma factor RpoE	no data	28	91
	Bacteroides ovatus ATCC 8483	BACOVA_05556		RNA polymerase sigma-70 factor	insig.	26	89
	Bacteroides ovatus ATCC 8483	BACOVA_04812		RNA polymerase sigma-70 factor	insig.	25	87
	Pseudomonas stutzeri RCH2	Psest_0114		RNA polymerase sigma factor, sigma-70 family	insig.	26	92
	Rhodanobacter sp. FW510-T8	OKGIIK_01380	rpoE	RNA polymerase subunit sigma-24	insig.	30	72
	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_09910		hypothetical protein	insig.	27	85
	Pseudomonas sp. FW215-L2	GFF4455		ECF RNA polymerase sigma factor SigK	insig.	29	83
	Methylophilus sp. DMC18	GFF2730		RNA polymerase sigma-H factor	no data	27	91
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS17775		hypothetical protein	sig.	25	89
	Pseudomonas fluorescens SBW25	PFLU_RS05190		RNA polymerase sigma factor	insig.	30	71
	Pseudomonas fluorescens SBW25-INTG	PFLU_RS05190		RNA polymerase sigma factor	insig.	30	71
	Phocaeicola dorei CL03T12C01	ABI39_RS06310		RNA polymerase sigma-70 factor	cofit	25	93
	Escherichia coli BL21	ECD_02467		RNA polymerase sigma E factor	no data	28	91
	Escherichia fergusonii Becca	EFB2_01323		ECF RNA polymerase sigma-E factor	no data	28	91
	Escherichia coli ECOR27	NOLOHH_13050	rpoE	RNA polymerase sigma factor RpoE	no data	28	91
	Escherichia coli ECOR38	HEPCGN_20520	rpoE	RNA polymerase sigma factor RpoE	no data	28	91
	Escherichia coli ECRC100	OKFHMN_21375	rpoE	RNA polymerase sigma factor RpoE	no data	28	91
	Escherichia coli ECRC101	MCAODC_11905	rpoE	RNA polymerase sigma factor RpoE	no data	28	91
	Escherichia coli ECRC102	NIAGMN_19145	rpoE	RNA polymerase sigma factor RpoE	no data	28	91
	Escherichia coli ECRC62	BNILDI_11850	rpoE	RNA polymerase sigma factor RpoE	no data	28	91
	Escherichia coli ECRC98	JDDGAC_25040	rpoE	RNA polymerase sigma factor RpoE	no data	28	91
	Escherichia coli ECRC99	KEDOAH_06845	rpoE	RNA polymerase sigma factor RpoE	no data	28	91
	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_01134		ECF RNA polymerase sigma-E factor	no data	28	91
	Escherichia coli Nissle 1917	ECOLIN_RS14560		RNA polymerase sigma factor RpoE	no data	28	91
	Escherichia coli BW25113	b2573	rpoE	RNA polymerase, sigma 24 (sigma E) factor (NCBI)	no data	28	91
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS13420		RNA polymerase sigma-70 factor	insig.	27	88
	Burkholderia phytofirmans PsJN	BPHYT_RS25560		RNA polymerase sigma factor	insig.	30	92
	Pseudomonas sp. DMC3	GFF1893		putative RNA polymerase sigma factor FecI	insig.	29	71
	Variovorax sp. OAS795	ABID97_RS16825		sigma-70 family RNA polymerase sigma factor	insig.	26	87
	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF2107		RNA polymerase sigma factor RpoE	no data	28	91
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS12470		hypothetical protein	insig.	27	92
	Dyella japonica UNC79MFTsu3.2	ABZR86_RS18950		sigma-70 family RNA polymerase sigma factor	insig.	25	85
	Pseudomonas sp. FW215-L2	GFF3270		putative RNA polymerase sigma factor FecI	insig.	30	71
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS09605		RNA polymerase sigma-70 factor	insig.	28	89
	Bacteroides ovatus ATCC 8483	BACOVA_03176		RNA polymerase sigma-70 factor	insig.	27	84
	Bacteroides thetaiotaomicron VPI-5482	BT0966		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	25	79
	Bacteroides thetaiotaomicron VPI-5482	BT4705		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	25	91
	Herbaspirillum seropedicae SmR1	HSERO_RS12085		RNA polymerase sigma-E factor protein	insig.	23	83
	Shewanella amazonensis SB2B	Sama_2611		ECF subfamily RNA polymerase sigma-24 factor (RefSeq)	insig.	22	91
	Bacteroides thetaiotaomicron VPI-5482	BT1817		RNA polymerase ECF-type sigma factor (NCBI ptt file)	sig.	28	78
	Enterobacter asburiae PDN3	EX28DRAFT_0072		RNA polymerase sigma factor RpoE	no data	28	91
	Enterobacter sp. TBS_079	MPMX20_03444		ECF RNA polymerase sigma-E factor	no data	28	91
	Pseudomonas segetis P6	ACVTMO_RS06730		sigma-70 family RNA polymerase sigma factor	insig.	27	86
	Dyella japonica UNC79MFTsu3.2	ABZR86_RS07180		RNA polymerase sigma factor RpoE	strong	25	91
	Pseudomonas fluorescens GW456-L13	PfGW456L13_1886		FIG006045: Sigma factor, ECF subfamily	insig.	31	70
	Dickeya dianthicola 67-19	HGI48_RS15850		RNA polymerase sigma factor RpoE	cofit	27	91
	Dickeya dianthicola ME23	DZA65_RS16930		RNA polymerase sigma factor RpoE	strong	27	91
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS04360		sigma-70 family RNA polymerase sigma factor	insig.	25	87
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS02575		hypothetical protein	insig.	31	76
	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.1840.1		FIG01210863: hypothetical protein	insig.	28	68
	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.3635.1		RNA polymerase ECF-type sigma factor	insig.	26	71
	Synechococcus elongatus PCC 7942	Synpcc7942_1923	sigG	RNA polymerase sigma factor RpoE	strong	31	69
	Bacteroides thetaiotaomicron VPI-5482	BT4722		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	30	87
	Variovorax sp. OAS795	ABID97_RS28845		RNA polymerase sigma factor	insig.	29	81
	Alteromonas macleodii MIT1002	MIT1002_02719		Sigma-24	no data	27	84
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_0358		RNA polymerase sigma factor, sigma-70 family	strong	25	89
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS09005		RNA polymerase sigma-70 factor	sig.	24	86
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS07350		sigma-70 family RNA polymerase sigma factor	insig.	30	76
	Acidovorax sp. GW101-3H11	Ac3H11_1573		RNA polymerase sigma factor RpoE	no data	27	71
	Bosea sp. OAE506	ABIE41_RS11620		sigma-70 family RNA polymerase sigma factor	insig.	24	85
	Bacteroides ovatus ATCC 8483	BACOVA_05184		RNA polymerase sigma-70 factor	insig.	22	91
	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_02680		RNA polymerase subunit sigma-70	insig.	29	87
	Phocaeicola dorei CL03T12C01	ABI39_RS03325		RNA polymerase sigma-70 factor	insig.	24	86
	Pseudomonas aeruginosa MRSN321	PFGADD_00155	fecI	RNA polymerase sigma factor FecI	insig.	29	78
	Pseudomonas aeruginosa PA14	IKLFDK_24795		RNA polymerase sigma factor	insig.	29	78
	Pseudomonas aeruginosa PUPa3	NPBIFN_00152	fecI	RNA polymerase sigma factor FecI	insig.	29	78
	Erwinia tracheiphila SCR3	LU632_RS15425	rpoE	RNA polymerase sigma factor RpoE	strong	27	91
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_0726		RNA polymerase sigma factor, sigma-70 family	insig.	25	84
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS10785		RNA polymerase sigma-70 factor	sig.	24	93
	Kangiella aquimarina DSM 16071	B158DRAFT_2027		RNA polymerase sigma factor, sigma-70 family	insig.	26	92
	Rahnella sp. WP5	EX31_RS21800		RNA polymerase sigma factor RpoE	no data	28	91
	Bacteroides ovatus ATCC 8483	BACOVA_01682		RNA polymerase sigma-70 factor	insig.	27	84
	Rhodanobacter denitrificans FW104-10B01	LRK54_RS07500		sigma-70 family RNA polymerase sigma factor	insig.	24	89
	Erwinia tracheiphila HP pepo 2.2	IJEDHG_01235	rpoE	RNA polymerase sigma factor RpoE	strong	27	91
	Dickeya dadantii 3937	DDA3937_RS15765		RNA polymerase sigma factor RpoE	strong	27	91
	Agrobacterium fabrum C58	Atu0474		putative RNA polymerase sigma-70 factor	insig.	27	93
	Sphingomonas koreensis DSMZ 15582	Ga0059261_0778		RNA polymerase sigma factor, sigma-70 family	insig.	26	81
	Rhodanobacter sp. FW510-T8	OKGIIK_14780		RNA polymerase subunit sigma-70	insig.	25	75
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_3981		RNA polymerase sigma-70 factor, Bacteroides expansion family 1	insig.	25	91
	Vibrio cholerae E7946 ATCC 55056	CSW01_12485		RNA polymerase sigma factor RpoE	no data	23	91
	Collimonas humicola GW821-FHT01A05	MPMX01_03915		hypothetical protein	insig.	29	90
	Variovorax sp. SCN45	GFF320		RNA polymerase ECF-type sigma factor	insig.	28	86
	Serratia liquefaciens MT49	IAI46_19585		RNA polymerase sigma factor RpoE	no data	28	91
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS05820		RNA polymerase sigma-70 factor	insig.	27	89
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS15195		RNA polymerase sigma-70 factor	insig.	27	95
	Azospirillum brasilense Sp245	AZOBR_RS23735		RNA polymerase	no data	26	83
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS12435		hypothetical protein	insig.	25	99
	Pseudomonas sp. DMC3	GFF1392		ECF RNA polymerase sigma factor SigK	cofit	24	89
	Variovorax sp. SCN45	GFF3863		RNA polymerase sigma factor RpoE	insig.	30	64
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS05575		RNA polymerase sigma-70 factor	insig.	29	86
	Phocaeicola dorei CL03T12C01	ABI39_RS10885		sigma-70 family RNA polymerase sigma factor	insig.	28	92
	Pseudomonas fluorescens SBW25	PFLU_RS13305		sigma-70 family RNA polymerase sigma factor	insig.	28	86
	Pseudomonas fluorescens SBW25-INTG	PFLU_RS13305		sigma-70 family RNA polymerase sigma factor	sig.	28	86
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS07715		RNA polymerase sigma factor	no data	28	70
	Pantoea agglomerans CFBP13505 P0401	PagCFBP13516_RS05140	rpoE	RNA polymerase sigma factor RpoE	no data	27	91
	Bacteroides thetaiotaomicron VPI-5482	BT2169		RNA polymerase ECF-type sigma factor (NCBI ptt file)	strong	27	84
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS14245		RNA polymerase sigma-70 factor	insig.	27	91
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS12140		hypothetical protein	insig.	26	95
	Azospirillum brasilense Sp245	AZOBR_RS28490		hypothetical protein	sig.	23	96
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS23360		hypothetical protein	insig.	30	68
	Bacteroides thetaiotaomicron VPI-5482	BT0248		RNA polymerase ECF-type sigma factor (NCBI ptt file)	sig.	29	65
	Bacteroides thetaiotaomicron VPI-5482	BT4402		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	29	81
	Rhizobium sp. OAE497	ABIE40_RS20320		sigma-70 family RNA polymerase sigma factor	insig.	28	77
	Pseudomonas simiae WCS417	PS417_12610		RNA polymerase sigma factor	sig.	28	86
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS10600		RNA polymerase subunit sigma-24	strong	27	86
	Shewanella loihica PV-4	Shew_1231		ECF subfamily RNA polymerase sigma-24 factor (RefSeq)	insig.	25	86
	Sphingomonas koreensis DSMZ 15582	Ga0059261_2952		RNA polymerase sigma factor, sigma-70 family	strong	24	84
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS24305		hypothetical protein	sig.	29	67
	Bacteroides ovatus ATCC 8483	BACOVA_03554		RNA polymerase sigma-70 factor	cofit	28	78
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS05370		RNA polymerase subunit sigma-70	insig.	27	91
	Bacteroides ovatus ATCC 8483	BACOVA_01977		RNA polymerase sigma-70 factor	cofit	26	95
	Rhodanobacter sp000427505 FW510-R12	LRK53_RS00445		sigma-70 family RNA polymerase sigma factor	insig.	23	84
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS18610		RNA polymerase sigma-70 factor	insig.	22	95
	Variovorax sp. OAS795	ABID97_RS08330		RNA polymerase sigma factor RpoE	strong	31	64
	Bacteroides stercoris CC31F	HMPREF1181_RS04660		sigma-70 family RNA polymerase sigma factor	insig.	29	65
	Rhodanobacter sp. FW510-T8	OKGIIK_13920		RNA polymerase subunit sigma	insig.	24	87
	Bacteroides thetaiotaomicron VPI-5482	BT2492		RNA polymerase ECF-type sigma factor (NCBI ptt file)	sig.	29	71
	Pseudomonas putida KT2440	PP_3006		RNA polymerase sigma-70 factor, ECF subfamily	insig.	28	86
	Bacteroides ovatus ATCC 8483	BACOVA_03855		RNA polymerase sigma-70 factor	insig.	26	80
	Rhodanobacter denitrificans MT42	LRK55_RS07240		sigma-70 family RNA polymerase sigma factor	insig.	24	89
	Bifidobacterium breve UCC2003	BBR_RS15930		RNA polymerase sigma factor	insig.	23	91
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS24900		RNA polymerase subunit sigma-70	insig.	23	83
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS07030		RNA polymerase sigma-70 factor	insig.	21	83