Homologs of deaD from Desulfovibrio vulgaris Hildenborough JW710

deaD: ATP-dependent RNA helicase, DEAD/DEAH family (TIGR)
SEED: DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13)
KEGG: ATP-dependent RNA helicase DeaD

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Desulfovibrio vulgaris Hildenborough JW710 DVU3310 deaD ATP-dependent RNA helicase, DEAD/DEAH family (TIGR) strong 100 100
o Desulfovibrio vulgaris Miyazaki F DvMF_2125 DEAD/DEAH box helicase domain protein (RefSeq) no data 60 99
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05910 RNA helicase strong 47 98
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3056 Superfamily II DNA and RNA helicases no data 49 81
o Methanococcus maripaludis JJ MMJJ_RS02855 DEAD/DEAH box helicase strong 42 98
o Methanococcus maripaludis S2 MMP_RS02420 DEAD/DEAH box helicase no data 42 98
o Alteromonas macleodii MIT1002 MIT1002_00666 Cold-shock DEAD box protein A strong 41 97
o Shewanella amazonensis SB2B Sama_0512 ATP-dependent RNA helicase DeaD (RefSeq) strong 41 98
o Dechlorosoma suillum PS Dsui_1351 DNA/RNA helicase, superfamily II strong 40 98
o Kangiella aquimarina DSM 16071 B158DRAFT_1850 ATP-dependent RNA helicase CsdA (EC 5.99.1.-) insig. 39 96
o Fusobacterium nucleatum SB010 HUW76_10100 DEAD/DEAH box helicase strong 39 99
o Klebsiella pneumoniae MKP103 KDGMDA_05860 DEAD/DEAH family ATP-dependent RNA helicase strong 42 94
o Erwinia tracheiphila SCR3 LU632_RS21030 DEAD/DEAH family ATP-dependent RNA helicase no data 42 94
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_13975 DEAD/DEAH family ATP-dependent RNA helicase no data 42 94
o Escherichia coli BL21 ECD_03029 ATP-dependent RNA helicase sig. 42 94
o Escherichia fergusonii Becca EFB2_00661 ATP-dependent RNA helicase DeaD sig. 42 94
o Escherichia coli ECOR27 NOLOHH_09955 deaD ATP-dependent RNA helicase DeaD sig. 42 94
o Escherichia coli ECOR38 HEPCGN_17030 deaD ATP-dependent RNA helicase DeaD strong 42 94
o Escherichia coli ECRC100 OKFHMN_18155 deaD ATP-dependent RNA helicase DeaD cofit 42 94
o Escherichia coli ECRC101 MCAODC_08675 deaD ATP-dependent RNA helicase DeaD strong 42 94
o Escherichia coli ECRC102 NIAGMN_15915 deaD ATP-dependent RNA helicase DeaD cofit 42 94
o Escherichia coli ECRC62 BNILDI_01580 deaD ATP-dependent RNA helicase DeaD cofit 42 94
o Escherichia coli ECRC98 JDDGAC_21780 deaD ATP-dependent RNA helicase DeaD strong 42 94
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00538 ATP-dependent RNA helicase DeaD sig. 42 94
o Escherichia coli Nissle 1917 ECOLIN_RS18165 ATP-dependent RNA helicase DeaD sig. 42 94
o Escherichia coli BW25113 b3162 deaD inducible ATP-independent RNA helicase (VIMSS) strong 42 94
o Escherichia coli ECRC99 KEDOAH_09995 deaD ATP-dependent RNA helicase DeaD no data 42 94
o Shewanella loihica PV-4 Shew_0531 DEAD/DEAH box helicase domain-containing protein (RefSeq) strong 39 98
o Pseudomonas sp. S08-1 OH686_22545 DEAD-box ATP-dependent RNA helicase DeaD ( CshA) cofit 41 92
o Pseudomonas stutzeri RCH2 Psest_1804 Superfamily II DNA and RNA helicases strong 43 93
o Rahnella sp. WP5 EX31_RS08510 DEAD/DEAH family ATP-dependent RNA helicase insig. 42 94
o Enterobacter sp. TBS_079 MPMX20_04066 ATP-dependent RNA helicase DeaD insig. 42 94
o Serratia liquefaciens MT49 IAI46_01970 DEAD/DEAH family ATP-dependent RNA helicase sig. 42 94
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1504 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) strong 42 94
o Shewanella sp. ANA-3 Shewana3_3595 DEAD/DEAH box helicase domain-containing protein (RefSeq) strong 39 98
o Klebsiella michiganensis M5al BWI76_RS25055 DEAD/DEAH family ATP-dependent RNA helicase no data 41 94
o Rhodanobacter sp. FW510-T8 OKGIIK_09705 ATP-dependent RNA helicase sig. 40 93
o Enterobacter asburiae PDN3 EX28DRAFT_3211 Superfamily II DNA and RNA helicases no data 41 94
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS07300 DEAD/DEAH box helicase insig. 39 93
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS02650 DEAD/DEAH box helicase insig. 39 93
o Dickeya dianthicola ME23 DZA65_RS03270 DEAD/DEAH family ATP-dependent RNA helicase no data 41 94
o Rhodanobacter denitrificans MT42 LRK55_RS02405 DEAD/DEAH box helicase cofit 39 93
o Dickeya dianthicola 67-19 HGI48_RS03275 DEAD/DEAH family ATP-dependent RNA helicase insig. 41 94
o Erwinia amylovora T8 OLJFJH_07275 DEAD/DEAH family ATP-dependent RNA helicase strong 41 94
o Shewanella oneidensis MR-1 SO4034 deaD ATP-dependent RNA helicase DeaD (NCBI ptt file) strong 38 97
o Pectobacterium carotovorum WPP14 HER17_RS18175 DEAD/DEAH family ATP-dependent RNA helicase insig. 41 94
o Dickeya dadantii 3937 DDA3937_RS03100 DEAD/DEAH family ATP-dependent RNA helicase insig. 41 94
o Mycobacterium tuberculosis H37Rv Rv1253 Probable cold-shock DeaD-box protein A homolog DeaD (ATP-dependent RNA helicase dead homolog) insig. 40 99
o Pseudomonas putida KT2440 PP_1868 ATP-dependent DEAD-box RNA helicase DeaD no data 41 96
o Pantoea sp. MT58 IAI47_16990 DEAD/DEAH family ATP-dependent RNA helicase strong 39 98
  Lysobacter sp. OAE881 ABIE51_RS12265 DEAD/DEAH box helicase insig. 49 79
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS09085 DEAD/DEAH family ATP-dependent RNA helicase cofit 39 98
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS08990 DEAD/DEAH box helicase strong 48 77
o Pseudomonas sp. BP01 JOY50_RS17005 DEAD/DEAH box helicase insig. 41 96
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2247 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) no data 40 97
o Bacteroides thetaiotaomicron VPI-5482 BT3303 ATP-dependent RNA helicase (NCBI ptt file) sig. 39 99
o Pseudomonas syringae pv. syringae B728a Psyr_3619 Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal no data 42 93
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3619 Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal no data 42 93
o Pseudomonas sp. RS175 PFR28_00980 ATP-dependent RNA helicase DeaD insig. 40 97
o Vibrio cholerae E7946 ATCC 55056 CSW01_18185 DEAD/DEAH box family ATP-dependent RNA helicase insig. 40 95
o Pseudomonas sp. DMC3 GFF4601 ATP-dependent RNA helicase DeaD no data 40 96
o Bacteroides ovatus ATCC 8483 BACOVA_00904 DEAD/DEAH box helicase insig. 38 98
o Bacteroides stercoris CC31F HMPREF1181_RS02175 DEAD/DEAH box helicase sig. 38 99
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1841.1 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) insig. 45 80
o Pseudomonas simiae WCS417 PS417_08540 RNA helicase strong 40 96
o Pseudomonas fluorescens FW300-N2E3 AO353_19130 RNA helicase no data 41 92
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2450 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) no data 40 96
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_265 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) no data 40 96
o Pseudomonas fluorescens FW300-N2C3 AO356_03110 RNA helicase no data 40 96
o Pseudomonas fluorescens SBW25 PFLU_RS08490 DEAD/DEAH box helicase no data 40 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS08490 DEAD/DEAH box helicase strong 40 96
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01840 ATP-dependent RNA helicase DeaD no data 40 96
o Pseudomonas orientalis W4I3 QF045_RS11260 DEAD/DEAH box helicase strong 40 96
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS06015 DEAD/DEAH box helicase insig. 39 94
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS01495 DEAD/DEAH box helicase no data 39 97
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15600 ATP-dependent RNA helicase no data 37 97
  Synechocystis sp000284455 PCC 6803 SGL_RS15320 DEAD/DEAH box helicase strong 46 79
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS11910 DEAD/DEAH box helicase strong 36 99
  Marinobacter adhaerens HP15 HP15_588 DEAD/DEAH box helicase domain protein sig. 48 72
o Cellulophaga baltica 18 M666_RS17990 DEAD/DEAH box helicase no data 35 97
o Pseudomonas aeruginosa MRSN321 DY961_RS22265 dbpA;go_function=nucleic ATP-dependent RNA helicase DbpA insig. 39 96
o Pseudomonas aeruginosa PUPa3 DQ20_RS37055 dbpA;go_function=nucleic ATP-dependent RNA helicase DbpA sig. 39 96
o Pseudomonas aeruginosa PA14 IKLFDK_23155 ATP-dependent RNA helicase DbpA insig. 39 96
o Phocaeicola dorei CL03T12C01 ABI39_RS04950 DEAD/DEAH box helicase strong 36 99
  Pseudomonas aeruginosa MRSN321 DY961_RS02795 DEAD/DEAH box helicase strong 40 95
  Pseudomonas aeruginosa PUPa3 DQ20_RS32800 DEAD/DEAH box helicase strong 40 95
  Pseudomonas aeruginosa PA14 IKLFDK_14425 ATP-dependent RNA helicase strong 40 95
  Bacteroides stercoris CC31F HMPREF1181_RS03715 DEAD/DEAH box helicase insig. 44 68
  Pseudomonas putida KT2440 PP_4952 ATP-dependent RNA helicase, specific for 23S rRNA insig. 38 97
  Burkholderia phytofirmans PsJN BPHYT_RS00150 DEAD/DEAH box helicase insig. 38 94
  Pseudomonas fluorescens FW300-N2E3 AO353_07850 ATP-dependent RNA helicase strong 38 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02294 ATP-dependent RNA helicase DbpA insig. 37 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4673 ATP-dependent 23S rRNA helicase DbpA strong 38 97
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS01200 DEAD/DEAH box helicase insig. 44 75
  Pseudomonas fluorescens FW300-N2C3 AO356_13770 ATP-dependent RNA helicase strong 38 97
  Pseudomonas stutzeri RCH2 Psest_0344 Superfamily II DNA and RNA helicases insig. 37 97
o Pseudomonas segetis P6 ACVTMO_RS03355 dbpA ATP-dependent RNA helicase DbpA insig. 37 97
  Pseudomonas sp. BP01 JOY50_RS09935 dbpA ATP-dependent RNA helicase DbpA insig. 38 95
  Dechlorosoma suillum PS Dsui_2946 DNA/RNA helicase, superfamily II insig. 38 94
  Pseudomonas syringae pv. syringae B728a Psyr_0516 ATP-dependent RNA helicase DbpA insig. 36 97