Homologs of SO2507 from Shewanella oneidensis MR-1

GGDEF domain protein (NCBI ptt file)
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO2507 GGDEF domain protein (NCBI ptt file) insig. 100 100
o Shewanella sp. ANA-3 Shewana3_2167 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 88 100
o Shewanella amazonensis SB2B Sama_1829 putative diguanylate phosphodiesterase (RefSeq) insig. 55 99
o Shewanella loihica PV-4 Shew_2065 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 52 100
  Alteromonas macleodii MIT1002 MIT1002_01618 Cyclic di-GMP phosphodiesterase Gmr insig. 24 98
  Marinobacter adhaerens HP15 HP15_3218 diguanylate cyclase/phosphodiesterase insig. 29 65
  Pseudomonas orientalis W4I3 QF045_RS03595 EAL domain-containing protein cofit 25 77
  Pseudomonas fluorescens FW300-N2C3 AO356_10580 hypothetical protein cofit 25 78
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3983 Membrane bound c-di-GMP receptor LapD strong 25 78
  Pseudomonas sp. RS175 PFR28_04783 hypothetical protein strong 24 78
  Pseudomonas protegens RBAN4 FABNJH_00690 Diguanylate cyclase/phosphodiesterase insig. 25 77
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1802 Membrane bound c-di-GMP receptor LapD insig. 24 77
  Pseudomonas sp. S08-1 OH686_11905 hypothetical protein insig. 27 65
  Pseudomonas fluorescens GW456-L13 PfGW456L13_546 Membrane bound c-di-GMP receptor LapD insig. 26 69
  Pseudomonas fluorescens FW300-N2E3 AO353_11170 hypothetical protein strong 24 77
  Pseudomonas sp. DMC3 GFF4286 hypothetical protein cofit 24 77
  Pseudomonas sp. SVBP6 COO64_RS26435 lapD cyclic di-GMP receptor LapD cofit 25 77
  Pseudomonas putida KT2440 PP_0165 GGDEF domain protein strong 25 69
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00514 RNase E specificity factor CsrD cofit 24 77
  Pseudomonas sp. BP01 JOY50_RS28180 lapD cyclic di-GMP receptor LapD no data 24 69
  Alteromonas macleodii MIT1002 MIT1002_01559 Cyclic di-GMP phosphodiesterase YfgF insig. 25 77
  Pseudomonas sp. S08-1 OH686_21075 Sensory box/GGDEF family protein insig. 26 66
  Acidovorax sp. GW101-3H11 Ac3H11_2106 Membrane bound c-di-GMP receptor LapD cofit 25 76
  Klebsiella pneumoniae MKP103 KDGMDA_06280 Lipoprotein strong 25 70
  Klebsiella pneumoniae MRSN742743 KFA93_RS13530 csrD;inference=COORDINATES RNase E specificity factor CsrD strong 25 70
  Shewanella amazonensis SB2B Sama_0449 regulatory protein CsrD (RefSeq) sig. 27 71
  Shewanella loihica PV-4 Shew_3125 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 25 65
  Pseudomonas simiae WCS417 PS417_19145 membrane protein strong 25 71
  Pseudomonas aeruginosa MRSN321 DY961_RS08185 EAL domain-containing protein sig. 25 70
  Pseudomonas aeruginosa PA14 IKLFDK_03805 PAS domain S-box protein insig. 25 70
  Pseudomonas fluorescens SBW25 PFLU_RS21140 EAL domain-containing protein cofit 25 71
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21140 EAL domain-containing protein strong 25 71
  Klebsiella michiganensis M5al BWI76_RS25505 RNase E specificity factor CsrD strong 24 70
  Pseudomonas aeruginosa PUPa3 DQ20_RS44635 EAL domain-containing protein sig. 25 66
  Pseudomonas sp. BP01 JOY50_RS16180 EAL domain-containing protein insig. 25 67
  Pseudomonas putida KT2440 PP_1761 diguanylate cyclase with phosphodiesterase domain strong 24 67
  Escherichia fergusonii Becca EFB2_00579 RNase E specificity factor CsrD insig. 24 67
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04056 hypothetical protein cofit 25 71
  Pseudomonas orientalis W4I3 QF045_RS21100 EAL domain-containing protein cofit 24 71
  Escherichia coli ECOR38 HEPCGN_16585 csrD RNase E specificity factor CsrD cofit 24 70
  Escherichia coli Nissle 1917 ECOLIN_RS18635 RNase E specificity factor CsrD cofit 24 67
  Escherichia coli BL21 ECD_03111 targeting factor for csrBC sRNA degradation cofit 24 70
  Escherichia coli ECOR27 NOLOHH_09505 csrD RNase E specificity factor CsrD sig. 24 70
  Escherichia coli ECRC100 OKFHMN_17720 csrD RNase E specificity factor CsrD cofit 24 70
  Escherichia coli ECRC101 MCAODC_08240 csrD RNase E specificity factor CsrD cofit 24 70
  Escherichia coli ECRC102 NIAGMN_15480 csrD RNase E specificity factor CsrD cofit 24 70
  Escherichia coli ECRC62 BNILDI_02015 csrD RNase E specificity factor CsrD cofit 24 70
  Escherichia coli ECRC98 JDDGAC_21345 csrD RNase E specificity factor CsrD cofit 24 70
  Escherichia coli ECRC99 KEDOAH_10430 csrD RNase E specificity factor CsrD no data 24 70
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00453 RNase E specificity factor CsrD cofit 24 70
  Escherichia coli BW25113 b3252 yhdA conserved inner membrane protein (NCBI) sig. 24 70
  Pseudomonas sp. DMC3 GFF4687 hypothetical protein cofit 24 67
  Enterobacter sp. TBS_079 MPMX20_04158 RNase E specificity factor CsrD strong 23 76
  Serratia liquefaciens MT49 IAI46_22725 RNase E specificity factor CsrD cofit 23 86
  Pseudomonas sp. SVBP6 COO64_RS06790 EAL domain-containing protein cofit 25 67
  Pectobacterium carotovorum WPP14 HER17_RS05880 EAL domain-containing protein cofit 24 67
  Dechlorosoma suillum PS Dsui_0760 diguanylate cyclase (GGDEF) domain-containing protein cofit 25 66
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2166 Sensory box/GGDEF family protein insig. 24 67
  Pseudomonas fluorescens FW300-N2C3 AO356_03515 hypothetical protein cofit 25 70
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2530 Sensory box/GGDEF family protein strong 25 70
  Enterobacter asburiae PDN3 EX28DRAFT_3302 diguanylate cyclase (GGDEF) domain cofit 23 70
  Pseudomonas syringae pv. syringae B728a Psyr_3655 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) cofit 24 67
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3655 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 24 67
  Erwinia amylovora T8 OLJFJH_06905 RNase E specificity factor CsrD strong 24 65
  Marinobacter adhaerens HP15 HP15_862 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain insig. 25 65
  Shewanella amazonensis SB2B Sama_2973 GGDEF domain-containing protein (RefSeq) insig. 24 65
  Erwinia tracheiphila SCR3 LU632_RS21455 csrD RNase E specificity factor CsrD insig. 24 68
  Vibrio cholerae E7946 ATCC 55056 CSW01_00390 GGDEF domain-containing protein insig. 25 67
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_361 Sensory box/GGDEF family protein insig. 24 67
  Pseudomonas sp. RS175 PFR28_00896 hypothetical protein insig. 24 70
  Pseudomonas segetis P6 ACVTMO_RS14575 lapD cyclic di-GMP receptor LapD insig. 22 74
  Cupriavidus basilensis FW507-4G11 RR42_RS03995 diguanylate cyclase insig. 25 66
  Shewanella loihica PV-4 Shew_0384 regulatory protein CsrD (RefSeq) strong 25 70
  Rhodanobacter denitrificans MT42 LRK55_RS09660 EAL domain-containing protein insig. 25 64
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10020 EAL domain-containing protein insig. 25 64
  Kangiella aquimarina DSM 16071 B158DRAFT_2394 diguanylate cyclase (GGDEF) domain strong 25 69
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2133 RNase E specificity factor CsrD strong 25 71
  Pantoea sp. MT58 IAI47_02430 RNase E specificity factor CsrD insig. 24 71
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_13555 csrD RNase E specificity factor CsrD cofit 23 68
  Pseudomonas protegens RBAN4 FABNJH_22350 PAS domain S-box protein insig. 25 67
  Acidovorax sp. GW101-3H11 Ac3H11_903 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 24 65
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS02445 csrD RNase E specificity factor CsrD cofit 25 64
  Acidovorax sp. GW101-3H11 Ac3H11_4120 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 25 66
  Shewanella oneidensis MR-1 SO4116 mshH MSHA biogenesis protein MshH (NCBI ptt file) strong 23 70
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS02790 EAL domain-containing protein insig. 25 65
  Pseudomonas fluorescens FW300-N2E3 AO353_02120 hypothetical protein strong 24 67
  Shewanella sp. ANA-3 Shewana3_3668 regulatory protein CsrD (RefSeq) sig. 23 70
  Shewanella sp. ANA-3 Shewana3_0376 diguanylate cyclase/phosphodiesterase (RefSeq) sig. 24 78
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1842.1 Mlr3171 protein insig. 24 66
  Pseudomonas fluorescens FW300-N2E3 AO353_18415 hypothetical protein insig. 23 69
  Herbaspirillum seropedicae SmR1 HSERO_RS13550 diguanylate phosphodiesterase insig. 24 79
  Rhodospirillum rubrum S1H Rru_A2763 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 25 65
  Rhodanobacter sp. FW510-T8 OKGIIK_16275 Diguanylate cyclase insig. 25 65
  Pseudomonas sp. S08-1 OH686_20650 Membrane bound c-di-GMP receptor LapD insig. 22 69
  Paraburkholderia sabiae LMG 24235 QEN71_RS35965 EAL domain-containing protein strong 25 69
  Shewanella oneidensis MR-1 SO4323 GGDEF domain protein (NCBI ptt file) sig. 24 78
  Rahnella sp. WP5 EX31_RS12230 RNase E specificity factor CsrD insig. 23 68
  Shewanella oneidensis MR-1 SO0628 GGDEF domain protein (NCBI ptt file) insig. 24 65
  Vibrio cholerae E7946 ATCC 55056 CSW01_02100 RNase E specificity factor CsrD cofit 23 64
  Alteromonas macleodii MIT1002 MIT1002_00145 Cyclic di-GMP phosphodiesterase Gmr cofit 24 65
  Bosea sp. OAE506 ABIE41_RS19250 EAL domain-containing protein insig. 24 66
  Paraburkholderia sabiae LMG 24235 QEN71_RS17100 EAL domain-containing protein insig. 26 65
  Pseudomonas aeruginosa MRSN321 DY961_RS06515 diguanylate cyclase sig. 25 66
  Pseudomonas aeruginosa PA14 IKLFDK_05475 diguanylate cyclase insig. 25 66
  Pseudomonas aeruginosa PUPa3 DQ20_RS46285 diguanylate cyclase cofit 25 66
  Shewanella sp. ANA-3 Shewana3_0620 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 23 65
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3529 Membrane bound c-di-GMP receptor LapD insig. 22 72
  Shewanella loihica PV-4 Shew_3416 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 24 66
  Pectobacterium carotovorum WPP14 HER17_RS20175 RNase E specificity factor CsrD insig. 23 65
  Shewanella sp. ANA-3 Shewana3_0436 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) strong 26 65
  Shewanella amazonensis SB2B Sama_0388 putative diguanylate phosphodiesterase (RefSeq) strong 24 65
  Shewanella loihica PV-4 Shew_0307 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 22 75
  Shewanella oneidensis MR-1 SO0437 sensory box protein (NCBI ptt file) strong 26 65
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS03505 EAL domain-containing protein insig. 24 76
  Dickeya dianthicola 67-19 HGI48_RS01345 RNase E specificity factor CsrD cofit 23 73
  Klebsiella pneumoniae MKP103 KDGMDA_25960 GGDEF-domain containing protein insig. 25 67
  Magnetospirillum magneticum AMB-1 AMB_RS03740 signal transduction protein insig. 24 65
  Dickeya dianthicola ME23 DZA65_RS01405 RNase E specificity factor CsrD sig. 23 70
  Vibrio cholerae E7946 ATCC 55056 CSW01_19490 GGDEF domain-containing protein cofit 24 67
  Klebsiella michiganensis M5al BWI76_RS18710 GGDEF-domain containing protein strong 24 70
  Castellaniella sp019104865 MT123 ABCV34_RS12680 bifunctional diguanylate cyclase/phosphodiesterase sig. 27 60
  Pseudomonas syringae pv. syringae B728a Psyr_1981 PAS:GGDEF insig. 26 66
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1981 PAS:GGDEF insig. 26 66
  Pseudomonas sp. SVBP6 COO64_RS05675 EAL domain-containing protein insig. 26 69
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05924 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein insig. 23 66
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03950 hypothetical protein cofit 24 73
  Pseudomonas sp. S08-1 OH686_09725 Sensory box/GGDEF family protein cofit 26 66
  Klebsiella pneumoniae MRSN742743 KFA93_RS07215 putative bifunctional diguanylate cyclase/phosphodiesterase insig. 25 67
  Paraburkholderia sabiae LMG 24235 QEN71_RS30355 bifunctional diguanylate cyclase/phosphodiesterase insig. 22 66
  Marinobacter adhaerens HP15 HP15_3533 response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 25 68
  Marinobacter adhaerens HP15 HP15_68 sensory box/FOG: EAL domain/GGDEF domain containing protein insig. 24 70
  Shewanella amazonensis SB2B Sama_3264 putative diguanylate phosphodiesterase (RefSeq) sig. 23 78
  Pseudomonas putida KT2440 PP_1983 PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase insig. 26 69
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07745 EAL domain-containing protein cofit 25 67
  Sinorhizobium meliloti 1021 SMa0137 Diguanylate cyclase/phosphodiesterase insig. 24 65
  Pseudomonas sp. BP01 JOY50_RS16640 PAS domain S-box protein insig. 26 69
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1972.1 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 26 66
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10715 EAL domain-containing protein insig. 23 77
  Pseudomonas sp. SVBP6 COO64_RS14580 bifunctional diguanylate cyclase/phosphodiesterase insig. 23 66
  Pseudomonas fluorescens FW300-N2E3 AO353_27105 diguanylate cyclase insig. 23 65
  Escherichia coli ECOR38 HEPCGN_20955 Cytochrome C-type biogenesis protein insig. 29 35
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01223 Cyclic di-GMP phosphodiesterase PdeF insig. 29 35
  Dechlorosoma suillum PS Dsui_1565 diguanylate cyclase (GGDEF) domain-containing protein cofit 26 65
  Pseudomonas segetis P6 ACVTMO_RS15240 PAS domain S-box protein insig. 26 73
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_17 Sensory box/GGDEF family protein insig. 24 69
  Methylophilus sp. DMC18 GFF887 hypothetical protein cofit 21 72
  Pseudomonas fluorescens FW300-N2E3 AO353_12850 diguanylate cyclase strong 25 65
  Ralstonia solanacearum PSI07 RPSI07_RS21500 bifunctional diguanylate cyclase/phosphodiesterase insig. 24 66
  Rhodanobacter denitrificans MT42 LRK55_RS10355 EAL domain-containing protein cofit 23 76
  Rhodopseudomonas palustris CGA009 TX73_002740 bifunctional diguanylate cyclase/phosphodiesterase insig. 23 65
  Pseudomonas simiae WCS417 PS417_12760 histidine kinase insig. 22 66
  Pseudomonas stutzeri RCH2 Psest_1864 diguanylate cyclase (GGDEF) domain insig. 21 69
  Pseudomonas fluorescens FW300-N2C3 AO356_14260 diguanylate cyclase insig. 23 75
  Acidovorax sp. GW101-3H11 Ac3H11_2446 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 23 65
  Pseudomonas fluorescens SBW25 PFLU_RS13445 bifunctional diguanylate cyclase/phosphodiesterase insig. 22 66
  Pseudomonas fluorescens SBW25-INTG PFLU_RS13445 bifunctional diguanylate cyclase/phosphodiesterase insig. 22 66
  Escherichia fergusonii Becca EFB2_01395 Cyclic di-GMP phosphodiesterase PdeF insig. 29 35
  Escherichia coli Nissle 1917 ECOLIN_RS14210 cyclic-guanylate-specific phosphodiesterase PdeF insig. 29 35
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 23 71
  Dickeya dadantii 3937 DDA3937_RS01425 RNase E specificity factor CsrD cofit 22 68
  Escherichia coli ECOR27 NOLOHH_13440 pdeF cyclic-guanylate-specific phosphodiesterase PdeF insig. 30 34
  Pseudomonas stutzeri RCH2 Psest_0445 PAS domain S-box/diguanylate cyclase (GGDEF) domain strong 25 67
  Pseudomonas orientalis W4I3 QF045_RS20750 PAS domain S-box protein insig. 25 69
  Escherichia coli ECRC62 BNILDI_12250 pdeF cyclic-guanylate-specific phosphodiesterase PdeF cofit 29 35
  Escherichia coli ECRC99 KEDOAH_06430 pdeF cyclic-guanylate-specific phosphodiesterase PdeF no data 29 35
  Synechococcus elongatus PCC 7942 Synpcc7942_2519 diguanylate cyclase/phosphodiesterase insig. 25 68
  Escherichia coli ECRC100 OKFHMN_21790 pdeF cyclic-guanylate-specific phosphodiesterase PdeF insig. 30 34
  Escherichia coli ECRC101 MCAODC_12320 pdeF cyclic-guanylate-specific phosphodiesterase PdeF insig. 30 34
  Escherichia coli ECRC102 NIAGMN_19560 pdeF cyclic-guanylate-specific phosphodiesterase PdeF cofit 30 34
  Escherichia coli ECRC98 JDDGAC_25735 pdeF cyclic-guanylate-specific phosphodiesterase PdeF insig. 30 34
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1479 Sensory box/GGDEF family protein insig. 25 65
  Acidovorax sp. GW101-3H11 Ac3H11_2210 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 24 65
  Rahnella sp. WP5 EX31_RS08335 cyclic di-GMP phosphodiesterase sig. 24 65
  Pseudomonas fluorescens GW456-L13 PfGW456L13_490 GGDEF domain protein insig. 23 67
  Pseudomonas aeruginosa PA14 IKLFDK_24035 GGDEF domain-containing protein insig. 23 71
  Pseudomonas simiae WCS417 PS417_25885 diguanylate cyclase insig. 22 71
  Shewanella amazonensis SB2B Sama_0082 GGDEF domain-containing protein (RefSeq) sig. 25 60
  Ralstonia solanacearum PSI07 RPSI07_RS15375 GGDEF-domain containing protein insig. 22 65
  Enterobacter asburiae PDN3 EX28DRAFT_0744 FOG: EAL domain insig. 28 36
  Pseudomonas sp. DMC3 GFF3151 hypothetical protein cofit 25 65
  Kangiella aquimarina DSM 16071 B158DRAFT_1223 diguanylate cyclase/phosphodiesterase insig. 24 64
  Pseudomonas sp. RS175 PFR28_05058 hypothetical protein strong 24 65
  Pseudomonas sp. SVBP6 COO64_RS22585 EAL domain-containing protein insig. 23 71
  Pseudomonas aeruginosa MRSN321 DY961_RS21370 EAL domain-containing protein strong 23 71
  Dechlorosoma suillum PS Dsui_2894 diguanylate cyclase (GGDEF) domain-containing protein cofit 21 67
  Pseudomonas protegens RBAN4 FABNJH_06820 Signaling repeat/GGDEF domain/EAL domain protein insig. 23 67
  Rhodospirillum rubrum S1H Rru_A2604 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) (NCBI) insig. 21 82
  Escherichia coli Nissle 1917 ECOLIN_RS10095 cyclic diguanylate phosphodiesterase insig. 29 36
  Escherichia coli BL21 ECD_02395 cyclic-di-GMP phosphodiesterase, anaerobic cofit 29 35
  Escherichia coli BW25113 b2503 yfgF predicted inner membrane protein (NCBI) insig. 29 35
  Rhodospirillum rubrum S1H Rru_A1805 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) cofit 26 57
  Azospirillum sp. SherDot2 MPMX19_04839 hypothetical protein insig. 25 68
  Pseudomonas protegens RBAN4 FABNJH_02635 Cyclic di-GMP phosphodiesterase Gmr insig. 24 65
  Pseudomonas fluorescens SBW25 PFLU_RS20590 EAL domain-containing protein insig. 24 69
  Pseudomonas fluorescens SBW25-INTG PFLU_RS20590 EAL domain-containing protein insig. 24 69
  Pseudomonas simiae WCS417 PS417_18610 histidine kinase sig. 24 69
  Ralstonia solanacearum GMI1000 RS_RS02540 bifunctional diguanylate cyclase/phosphodiesterase insig. 24 66
  Pseudomonas sp. DMC3 GFF1254 hypothetical protein insig. 23 65
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_467 Sensory box/GGDEF family protein insig. 22 66
  Escherichia coli BL21 ECD_01785 putative membrane-anchored cyclic-di-GMP phosphodiesterase, regulator of cellulose production insig. 29 36
  Escherichia fergusonii Becca EFB2_02185 putative cyclic di-GMP phosphodiesterase PdeD insig. 29 36
  Escherichia coli ECOR27 NOLOHH_17065 pdeD putative cyclic di-GMP phosphodiesterase PdeD insig. 29 36
  Escherichia coli ECOR38 HEPCGN_04935 pdeD putative cyclic di-GMP phosphodiesterase PdeD insig. 29 36
  Escherichia coli ECRC100 OKFHMN_26545 pdeD putative cyclic di-GMP phosphodiesterase PdeD cofit 29 36
  Escherichia coli ECRC101 MCAODC_18865 pdeD putative cyclic di-GMP phosphodiesterase PdeD insig. 29 36
  Escherichia coli ECRC102 NIAGMN_01520 pdeD putative cyclic di-GMP phosphodiesterase PdeD insig. 29 36
  Escherichia coli ECRC62 BNILDI_15850 pdeD putative cyclic di-GMP phosphodiesterase PdeD insig. 29 36
  Escherichia coli ECRC98 JDDGAC_01120 pdeD putative cyclic di-GMP phosphodiesterase PdeD insig. 29 36
  Escherichia coli ECRC99 KEDOAH_01565 pdeD putative cyclic di-GMP phosphodiesterase PdeD no data 29 36
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01916 putative cyclic di-GMP phosphodiesterase PdeD cofit 29 36
  Escherichia coli BW25113 b1815 b1815 orf, hypothetical protein (VIMSS) sig. 29 36
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2829 Rtn protein insig. 28 37
  Pseudomonas fluorescens FW300-N2C3 AO356_08975 diguanylate cyclase strong 24 65
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3677 Sensory box/GGDEF family protein strong 24 65
  Dechlorosoma suillum PS Dsui_3104 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein strong 24 67
  Pseudomonas protegens RBAN4 FABNJH_24890 EAL domain-containing protein insig. 23 83
  Pseudomonas sp. RS175 PFR28_04079 Membrane-bound lytic murein transglycosylase F insig. 23 75
  Pseudomonas aeruginosa PUPa3 DQ20_RS37920 EAL domain-containing protein strong 23 71
  Pseudomonas syringae pv. syringae B728a Psyr_2486 diguanylate cyclase/phosphodiesterase insig. 23 66
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2486 diguanylate cyclase/phosphodiesterase insig. 23 66
  Synechocystis sp000284455 PCC 6803 SGL_RS06175 EAL domain-containing protein insig. 23 65
  Pseudomonas segetis P6 ACVTMO_RS16300 putative bifunctional diguanylate cyclase/phosphodiesterase insig. 23 83
  Vibrio cholerae E7946 ATCC 55056 CSW01_03465 GGDEF-domain containing protein cofit 23 69
  Pseudomonas stutzeri RCH2 Psest_1163 diguanylate cyclase (GGDEF) domain strong 22 67
  Vibrio cholerae E7946 ATCC 55056 CSW01_08600 hypothetical protein insig. 28 37
  Pseudomonas sp. BP01 JOY50_RS17800 bifunctional diguanylate cyclase/phosphodiesterase insig. 24 65
  Pseudomonas segetis P6 ACVTMO_RS12875 DUF1631 family protein insig. 24 64
  Ralstonia solanacearum GMI1000 RS_RS07755 GGDEF-domain containing protein insig. 22 65
  Rhizobium sp. OAE497 ABIE40_RS15510 bifunctional diguanylate cyclase/phosphodiesterase insig. 25 57
  Paraburkholderia sabiae LMG 24235 QEN71_RS10745 EAL domain-containing protein insig. 22 69
  Caulobacter crescentus NA1000 CCNA_01140 PAS-containing EAL phosphodiesterase insig. 28 34
  Caulobacter crescentus NA1000 Δfur CCNA_01140 PAS-containing EAL phosphodiesterase insig. 28 34
  Ralstonia sp. UNC404CL21Col ABZR87_RS19490 bifunctional diguanylate cyclase/phosphodiesterase strong 24 69
  Xanthobacter sp. DMC5 GFF425 Oxygen sensor protein DosP insig. 24 65
  Pseudomonas sp. RS175 PFR28_02826 hypothetical protein strong 23 69
  Rahnella sp. WP5 EX31_RS22670 sensor domain-containing phosphodiesterase insig. 28 34
  Rhodanobacter sp. FW510-T8 OKGIIK_09545 pAS PAS domain cofit 26 46
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08805 EAL domain-containing protein cofit 26 44
  Pseudomonas putida KT2440 PP_0337 Sensory box protein sig. 24 65
  Pseudomonas simiae WCS417 PS417_02210 diguanylate cyclase strong 24 65
  Dechlorosoma suillum PS Dsui_0262 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 23 65
  Rhodanobacter denitrificans MT42 LRK55_RS02245 GGDEF domain-containing phosphodiesterase cofit 23 72
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02490 EAL domain-containing protein strong 23 72
  Rhizobium sp. OAE497 ABIE40_RS13070 EAL domain-containing protein insig. 23 71
  Pseudomonas protegens RBAN4 FABNJH_01005 Diguanylate cyclase domain-containing protein insig. 23 67
  Pseudomonas sp. SVBP6 COO64_RS26700 bifunctional diguanylate cyclase/phosphodiesterase cofit 24 65
  Marinobacter adhaerens HP15 HP15_3312 diguanylate cyclase/phosphodiesterase cofit 29 32
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS07455 GGDEF domain-containing phosphodiesterase insig. 24 72
  Enterobacter asburiae PDN3 EX28DRAFT_2619 diguanylate cyclase (GGDEF) domain strong 23 70
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2512 sensory box/GGDEF domain/EAL domain protein insig. 22 71