Homologs of SO2216 from Shewanella oneidensis MR-1

sensory box protein (NCBI ptt file)
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO2216 sensory box protein (NCBI ptt file) insig. 100 100
o Shewanella sp. ANA-3 Shewana3_2308 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 87 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00437 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein insig. 36 95
o Ralstonia solanacearum GMI1000 RS_RS02945 PAS domain S-box protein insig. 35 97
o Paraburkholderia graminis OAS925 ABIE53_002821 diguanylate cyclase (GGDEF)-like protein/PAS domain S-box-containing protein sig. 36 94
  Burkholderia phytofirmans PsJN BPHYT_RS13030 diguanylate cyclase insig. 35 95
  Ralstonia solanacearum PSI07 RPSI07_RS21070 PAS domain S-box protein insig. 35 97
  Ralstonia sp. UNC404CL21Col ABZR87_RS19215 EAL domain-containing protein cofit 34 96
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS12250 diguanylate cyclase insig. 35 96
  Ralstonia solanacearum UW163 UW163_RS01355 diguanylate cyclase insig. 35 96
  Cupriavidus basilensis FW507-4G11 RR42_RS00130 diguanylate cyclase insig. 34 95
  Ralstonia sp. UNC404CL21Col ABZR87_RS08150 EAL domain-containing protein insig. 35 95
  Ralstonia solanacearum GMI1000 RS_RS22695 bifunctional diguanylate cyclase/phosphodiesterase insig. 35 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS08805 EAL domain-containing protein insig. 34 94
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS18290 bifunctional diguanylate cyclase/phosphodiesterase insig. 35 96
  Ralstonia solanacearum UW163 UW163_RS20840 bifunctional diguanylate cyclase/phosphodiesterase insig. 35 96
  Methylophilus sp. DMC18 GFF1518 hypothetical protein cofit 34 98
  Pseudomonas fluorescens FW300-N2C3 AO356_26670 histidine kinase insig. 33 97
  Ralstonia solanacearum PSI07 RPSI07_RS05310 PAS domain S-box protein cofit 34 96
  Pseudomonas putida KT2440 PP_3319 Sensory box protein/GGDEF domain protein insig. 33 96
  Shewanella sp. ANA-3 Shewana3_2929 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 37 74
  Magnetospirillum magneticum AMB-1 AMB_RS23535 PAS domain S-box protein cofit 38 73
  Dechlorosoma suillum PS Dsui_0262 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 36 72
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 36 74
  Shewanella oneidensis MR-1 SO1500 sensory box protein (NCBI ptt file) strong 37 73
  Shewanella loihica PV-4 Shew_2778 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 38 73
  Shewanella amazonensis SB2B Sama_2448 sensory box protein (RefSeq) insig. 37 73
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 36 75
  Cupriavidus basilensis FW507-4G11 RR42_RS09815 diguanylate cyclase insig. 36 74
  Ralstonia sp. UNC404CL21Col ABZR87_RS23350 EAL domain-containing protein insig. 36 74
  Acidovorax sp. GW101-3H11 Ac3H11_448 Sensory box/GGDEF family protein insig. 35 74
  Acidovorax sp. GW101-3H11 Ac3H11_4486 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 36 76
o Rhodanobacter denitrificans MT42 LRK55_RS12715 EAL domain-containing protein insig. 32 94
  Shewanella amazonensis SB2B Sama_0142 sensory box protein (RefSeq) sig. 35 78
  Magnetospirillum magneticum AMB-1 AMB_RS06165 CBS domain-containing protein insig. 35 73
  Marinobacter adhaerens HP15 HP15_1500 sensory box/GGDEF family protein insig. 35 73
  Methylophilus sp. DMC18 GFF1786 hypothetical protein insig. 35 76
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS13015 EAL domain-containing protein insig. 32 93
  Cupriavidus basilensis FW507-4G11 RR42_RS11565 diguanylate cyclase insig. 35 80
  Dechlorosoma suillum PS Dsui_3104 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein strong 36 75
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 35 75
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS15585 EAL domain-containing protein insig. 33 93
  Dechlorosoma suillum PS Dsui_2148 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 34 76
  Pseudomonas sp. SVBP6 COO64_RS03000 EAL domain-containing protein insig. 35 73
  Shewanella oneidensis MR-1 SO0141 sensory box protein (NCBI ptt file) strong 34 75
  Rhodanobacter sp. FW510-T8 OKGIIK_02390 Diguanylate cyclase insig. 32 94
  Shewanella sp. ANA-3 Shewana3_0133 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 34 75
  Synechococcus elongatus PCC 7942 Synpcc7942_1859 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 34 72
  Castellaniella sp019104865 MT123 ABCV34_RS04775 EAL domain-containing protein insig. 35 74
  Castellaniella sp019104865 MT123 ABCV34_RS00960 EAL domain-containing protein insig. 36 74
  Dechlorosoma suillum PS Dsui_0749 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 34 74
  Shewanella loihica PV-4 Shew_0979 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 37 63
  Magnetospirillum magneticum AMB-1 AMB_RS23380 PAS domain S-box protein insig. 35 74
  Pseudomonas fluorescens FW300-N2E3 AO353_14025 diguanylate phosphodiesterase strong 35 73
  Desulfovibrio vulgaris Miyazaki F DvMF_1530 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 35 76
  Pseudomonas sp. DMC3 GFF3964 hypothetical protein insig. 35 73
  Pseudomonas sp. BP01 JOY50_RS18490 dibA phosphodiesterase DibA insig. 34 76
  Magnetospirillum magneticum AMB-1 AMB_RS15005 two-component system response regulator insig. 33 75
  Variovorax sp. SCN45 GFF1448 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 35 74
  Magnetospirillum magneticum AMB-1 AMB_RS11515 DUF3365 domain-containing protein insig. 31 84
  Pseudomonas sp. BP01 JOY50_RS24630 bifunctional diguanylate cyclase/phosphodiesterase insig. 35 73
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1452 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 35 73
  Pseudomonas sp. S08-1 OH686_16235 Sensory box/GGDEF family protein insig. 35 73
  Pseudomonas putida KT2440 PP_0672 Sensory box protein sig. 35 73
  Rhodospirillum rubrum S1H Rru_A1544 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 34 70
  Azospirillum brasilense Sp245 AZOBR_RS04390 signal peptide protein cofit 33 75
  Rhodopseudomonas palustris CGA009 TX73_004010 EAL domain-containing protein insig. 41 60
  Pseudomonas aeruginosa MRSN321 DY961_RS23425 morA;inference=COORDINATES cyclic di-GMP receptor MorA insig. 34 74
  Pseudomonas aeruginosa PA14 IKLFDK_00505 cyclic di-GMP receptor MorA insig. 34 74
  Pseudomonas aeruginosa PUPa3 DQ20_RS55890 morA;inference=COORDINATES cyclic di-GMP receptor MorA sig. 34 74
  Synechocystis sp000284455 PCC 6803 SGL_RS11860 EAL domain-containing protein insig. 34 86
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5083 Serine hydroxymethyltransferase (EC 2.1.2.1) sig. 35 73
  Azospirillum sp. SherDot2 MPMX19_04641 hypothetical protein insig. 32 81
  Shewanella loihica PV-4 Shew_0041 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) strong 33 78
  Rhodospirillum rubrum S1H Rru_A3137 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 34 75
  Acidovorax sp. GW101-3H11 Ac3H11_446 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) strong 32 75
  Dechlorosoma suillum PS Dsui_3449 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 35 75
  Kangiella aquimarina DSM 16071 B158DRAFT_2237 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 33 75
  Pseudomonas fluorescens FW300-N2C3 AO356_15730 diguanylate phosphodiesterase insig. 35 73
  Pseudomonas sp. RS175 PFR28_03785 hypothetical protein insig. 35 73
  Pseudomonas putida KT2440 PP_0218 Sensory box protein strong 34 76
  Pseudomonas simiae WCS417 PS417_24275 diguanylate phosphodiesterase strong 35 73
  Methylophilus sp. DMC18 GFF247 hypothetical protein insig. 38 59
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2779 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 35 73
  Castellaniella sp019104865 MT123 ABCV34_RS15140 EAL domain-containing protein insig. 34 73
  Pseudomonas aeruginosa PUPa3 DQ20_RS36445 EAL domain-containing protein insig. 34 76
  Kangiella aquimarina DSM 16071 B158DRAFT_0509 diguanylate cyclase (GGDEF) domain strong 33 72
  Pseudomonas aeruginosa MRSN321 DY961_RS22900 EAL domain-containing protein insig. 34 76
  Magnetospirillum magneticum AMB-1 AMB_RS21020 bifunctional diguanylate cyclase/phosphodiesterase insig. 40 60
  Pseudomonas fluorescens SBW25 PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase cofit 35 73
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase sig. 35 73
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05007 hypothetical protein cofit 34 73
  Dechlorosoma suillum PS Dsui_1011 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 34 74
  Pseudomonas aeruginosa PA14 IKLFDK_22535 bifunctional diguanylate cyclase/phosphodiesterase insig. 34 76
  Dechlorosoma suillum PS Dsui_2160 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 34 72
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 35 72
  Pseudomonas orientalis W4I3 QF045_RS26570 EAL domain-containing protein insig. 35 73
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 35 72
  Bosea sp. OAE506 ABIE41_RS10320 EAL domain-containing protein insig. 38 62
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 34 74