Conservation of cofitness between SMc00618 and SMc01440 in Sinorhizobium meliloti 1021

80 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc00618 polyphosphate kinase 1.0 SMc01440 hydrolase serine protease transmembrane protein 0.59 14
Rhizobium sp. OAE497 0.86 ABIE40_RS06575 RNA degradosome polyphosphate kinase 0.64 ABIE40_RS11530 protease modulator HflC low > 107
Agrobacterium fabrum C58 0.85 Atu1144 polyphosphate kinase 0.73 Atu2044 HFLC protein — —
Rhodopseudomonas palustris CGA009 0.63 TX73_015770 RNA degradosome polyphosphate kinase 0.35 TX73_018075 protease modulator HflC low > 86
Bosea sp. OAE506 0.61 ABIE41_RS16125 RNA degradosome polyphosphate kinase 0.34 ABIE41_RS12855 protease modulator HflC low > 77
Azospirillum sp. SherDot2 0.59 MPMX19_01149 Polyphosphate kinase 0.36 MPMX19_01250 Modulator of FtsH protease HflC — —
Azospirillum brasilense Sp245 0.57 AZOBR_RS16235 polyphosphate kinase 0.34 AZOBR_RS06525 membrane protein low > 97
Magnetospirillum magneticum AMB-1 0.55 AMB_RS14295 RNA degradosome polyphosphate kinase 0.34 AMB_RS17655 protease modulator HflC — —
Rhodospirillum rubrum S1H 0.55 Rru_A2161 Polyphosphate kinase (NCBI) 0.33 Rru_A2202 HflC (NCBI) — —
Sphingomonas koreensis DSMZ 15582 0.52 Ga0059261_0225 polyphosphate kinase 1 0.21 Ga0059261_1381 Membrane protease subunits, stomatin/prohibitin homologs low > 68
Dinoroseobacter shibae DFL-12 0.51 Dshi_0740 Polyphosphate kinase (RefSeq) 0.35 Dshi_2735 HflC protein (RefSeq) low > 64
Dechlorosoma suillum PS 0.35 Dsui_2814 polyphosphate kinase 1 0.31 Dsui_3134 membrane protease subunit, stomatin/prohibitin — —
Pseudomonas sp. S08-1 0.35 OH686_13995 polyphosphate kinase 1 0.27 OH686_09455 HflC protein low > 80
Pseudomonas stutzeri RCH2 0.34 Psest_3732 polyphosphate kinase 1 0.26 Psest_0686 Membrane protease subunits, stomatin/prohibitin homologs — —
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_08995 ppk1 RNA degradosome polyphosphate kinase 0.27 OKGIIK_06645 hflC protease modulator HflC low > 52
Rhodanobacter denitrificans FW104-10B01 0.34 LRK54_RS16000 polyphosphate kinase 1 0.25 LRK54_RS00615 protease modulator HflC 0.60 49
Rhodanobacter denitrificans MT42 0.33 LRK55_RS15755 polyphosphate kinase 1 0.25 LRK55_RS00385 protease modulator HflC low > 63
Pseudomonas putida KT2440 0.33 PP_5217 Polyphosphate kinase 0.26 PP_4891 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex low > 96
Dyella japonica UNC79MFTsu3.2 0.33 ABZR86_RS07490 polyphosphate kinase 1 0.26 ABZR86_RS08350 protease modulator HflC low > 74
Herbaspirillum seropedicae SmR1 0.33 HSERO_RS06305 polyphosphate kinase 0.29 HSERO_RS14760 membrane protein low > 78
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_874 Polyphosphate kinase (EC 2.7.4.1) 0.27 PfGW456L13_151 HflC protein low > 87
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS31480 polyphosphate kinase 0.33 RR42_RS13100 membrane protein — —
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_08885 polyphosphate kinase 0.27 AO353_13370 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_12895 polyphosphate kinase 0.27 AO356_08640 membrane protease HflC low > 104
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_4453 Polyphosphate kinase (EC 2.7.4.1) 0.27 Pf6N2E2_3611 HflC protein low > 103
Pseudomonas sp. RS175 0.32 PFR28_04345 Polyphosphate kinase 0.26 PFR28_05124 Modulator of FtsH protease HflC low > 88
Pseudomonas simiae WCS417 0.32 PS417_27435 polyphosphate kinase 0.24 PS417_02505 membane protease HflC — —
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_2208 Polyphosphate kinase (EC 2.7.4.1) 0.27 Pf1N1B4_1409 HflC protein — —
Kangiella aquimarina DSM 16071 0.32 B158DRAFT_2312 polyphosphate kinase 1 0.24 B158DRAFT_1955 HflC protein low > 40
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS29095 polyphosphate kinase 1 0.26 PFLU_RS02585 protease modulator HflC low > 109
Pseudomonas fluorescens SBW25 0.32 PFLU_RS29095 polyphosphate kinase 1 0.26 PFLU_RS02585 protease modulator HflC low > 109
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_04418 polyphosphate kinase 0.20 H281DRAFT_00524 protease FtsH subunit HflC — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_0293 Polyphosphate kinase 0.28 Psyr_0575 protease FtsH subunit HflC 0.37 78
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_0293 Polyphosphate kinase 0.28 Psyr_0575 protease FtsH subunit HflC low > 86
Ralstonia solanacearum UW163 0.32 UW163_RS15425 polyphosphate kinase 1 0.29 UW163_RS12780 protease modulator HflC — —
Ralstonia solanacearum IBSBF1503 0.32 RALBFv3_RS02115 polyphosphate kinase 1 0.29 RALBFv3_RS15315 protease modulator HflC — —
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS04860 polyphosphate kinase 1 0.18 QEN71_RS06015 protease modulator HflC low > 153
Paraburkholderia graminis OAS925 0.32 ABIE53_002988 polyphosphate kinase 0.20 ABIE53_002734 membrane protease subunit HflC low > 113
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS14110 polyphosphate kinase 0.17 BPHYT_RS12540 membrane protein — —
Marinobacter adhaerens HP15 0.32 HP15_3334 polyphosphate kinase 0.26 HP15_2496 HflC low > 73
Ralstonia sp. UNC404CL21Col 0.31 ABZR87_RS14065 polyphosphate kinase 1 0.27 ABZR87_RS10955 protease modulator HflC low > 80
Ralstonia solanacearum PSI07 0.31 RPSI07_RS15330 polyphosphate kinase 1 0.29 RPSI07_RS18060 protease modulator HflC low > 81
Castellaniella sp019104865 MT123 0.31 ABCV34_RS15580 polyphosphate kinase 1 0.32 ABCV34_RS02665 protease modulator HflC — —
Ralstonia solanacearum GMI1000 0.31 RS_RS07705 polyphosphate kinase 1 0.29 RS_RS06125 protease modulator HflC — —
Lysobacter sp. OAE881 0.31 ABIE51_RS14230 polyphosphate kinase 1 0.27 ABIE51_RS06555 protease modulator HflC low > 62
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.4064.1 Polyphosphate kinase (EC 2.7.4.1) 0.26 Xcc-8004.3954.1 HflC protein low > 74
Variovorax sp. SCN45 0.29 GFF1089 Polyphosphate kinase (EC 2.7.4.1) 0.25 GFF1003 HflC protein low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.28 GFF4226 Polyphosphate kinase (EC 2.7.4.1) 0.23 GFF4855 HflC protein 0.65 31
Variovorax sp. OAS795 0.28 ABID97_RS14575 polyphosphate kinase 1 0.25 ABID97_RS14265 protease modulator HflC low > 91
Acidovorax sp. GW101-3H11 0.28 Ac3H11_452 Polyphosphate kinase (EC 2.7.4.1) 0.26 Ac3H11_1802 HflC protein low > 79
Echinicola vietnamensis KMM 6221, DSM 17526 0.26 Echvi_2996 polyphosphate kinase 1 0.20 Echvi_2032 HflC protein low > 79
Escherichia coli ECRC102 0.25 NIAGMN_19570 ppk1 polyphosphate kinase 1 0.26 NIAGMN_10090 hflC protease modulator HflC — —
Escherichia coli ECOR38 0.25 HEPCGN_20965 ppk1 polyphosphate kinase 1 0.26 HEPCGN_10470 hflC protease modulator HflC low > 85
Escherichia coli ECRC99 0.25 KEDOAH_06420 ppk1 polyphosphate kinase 1 0.26 KEDOAH_15915 hflC protease modulator HflC — —
Escherichia coli Nissle 1917 0.25 ECOLIN_RS14200 polyphosphate kinase 1 0.26 ECOLIN_RS24245 protease modulator HflC — —
Escherichia coli ECRC101 0.25 MCAODC_12330 ppk1 polyphosphate kinase 1 0.26 MCAODC_02755 hflC protease modulator HflC — —
Escherichia coli BW25113 0.25 b2501 ppk polyphosphate kinase (NCBI) 0.26 b4175 hflC modulator for HflB protease specific for phage lambda cII repressor (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.25 OHPLBJKB_01225 Polyphosphate kinase 0.26 OHPLBJKB_03867 Modulator of FtsH protease HflC low > 73
Escherichia coli BL21 0.25 ECD_02393 polyphosphate kinase, component of RNA degradosome 0.26 ECD_04042 HflB protease modulator specific for phage lambda cII repressor low > 60
Escherichia coli ECRC98 0.25 JDDGAC_25745 ppk1 polyphosphate kinase 1 0.26 JDDGAC_15880 hflC protease modulator HflC — —
Escherichia coli ECOR27 0.25 NOLOHH_13450 ppk1 polyphosphate kinase 1 0.26 NOLOHH_04505 hflC protease modulator HflC — —
Escherichia coli ECRC62 0.25 BNILDI_12260 ppk1 polyphosphate kinase 1 0.26 BNILDI_06985 hflC protease modulator HflC — —
Escherichia coli ECRC101 0.25 OKFHMN_21800 ppk1 polyphosphate kinase 1 0.26 OKFHMN_12240 hflC protease modulator HflC — —
Shewanella amazonensis SB2B 0.25 Sama_2011 polyphosphate kinase (RefSeq) 0.26 Sama_3022 hflC protein (RefSeq) low > 62
Escherichia fergusonii Becca 0.25 EFB2_01397 Polyphosphate kinase 0.26 EFB2_04360 Modulator of FtsH protease HflC low > 86
Serratia liquefaciens MT49 0.25 IAI46_18915 polyphosphate kinase 1 0.26 IAI46_01640 protease modulator HflC low > 86
Pectobacterium carotovorum WPP14 0.25 HER17_RS06425 polyphosphate kinase 1 0.28 HER17_RS02600 protease modulator HflC low > 75
Shewanella loihica PV-4 0.24 Shew_3079 polyphosphate kinase (RefSeq) 0.28 Shew_0569 HflC protein (RefSeq) low > 60
Enterobacter sp. TBS_079 0.24 MPMX20_03356 Polyphosphate kinase 0.26 MPMX20_00456 Modulator of FtsH protease HflC low > 85
Enterobacter asburiae PDN3 0.24 EX28DRAFT_0166 polyphosphate kinase 1 0.26 EX28DRAFT_3372 HflC protein low > 76
Shewanella sp. ANA-3 0.24 Shewana3_2417 polyphosphate kinase (RefSeq) 0.27 Shewana3_0600 HflC protein (RefSeq) low > 73
Erwinia tracheiphila SCR3 0.24 LU632_RS08260 ppk1 polyphosphate kinase 1 0.26 LU632_RS02070 hflC protease modulator HflC low > 74
Klebsiella michiganensis M5al 0.24 BWI76_RS20995 RNA degradosome polyphosphate kinase 0.27 BWI76_RS02550 protease modulator HflC low > 92
Dickeya dadantii 3937 0.24 DDA3937_RS15150 polyphosphate kinase 1 0.25 DDA3937_RS18595 protease modulator HflC — —
Rahnella sp. WP5 0.24 EX31_RS22680 polyphosphate kinase 1 0.25 EX31_RS08805 protease modulator HflC low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.24 GFF2167 Polyphosphate kinase (EC 2.7.4.1) 0.26 GFF828 HflC protein low > 78
Dickeya dianthicola ME23 0.24 DZA65_RS16045 polyphosphate kinase 1 0.25 DZA65_RS19665 protease modulator HflC low > 75
Dickeya dianthicola 67-19 0.23 HGI48_RS15225 polyphosphate kinase 1 0.25 HGI48_RS18530 protease modulator HflC low > 71
Pantoea sp. MT58 0.23 IAI47_05155 polyphosphate kinase 1 0.26 IAI47_02605 protease modulator HflC low > 76
Vibrio cholerae E7946 ATCC 55056 0.23 CSW01_03780 polyphosphate kinase 1 0.24 CSW01_01850 protease modulator HflC low > 62
Alteromonas macleodii MIT1002 0.22 MIT1002_00872 Polyphosphate kinase 0.29 MIT1002_03785 Modulator of FtsH protease HflC low > 70

Not shown: 16 genomes with orthologs for SMc00618 only; 4 genomes with orthologs for SMc01440 only