Conservation of cofitness between RR42_RS00615 and RR42_RS18305 in Cupriavidus basilensis FW507-4G11

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS00615 recombinase XerC 1.0 RR42_RS18305 anthranilate phosphoribosyltransferase 0.39 14
Ralstonia solanacearum PSI07 0.55 RPSI07_RS23690 tyrosine recombinase XerC 0.81 RPSI07_RS10740 anthranilate phosphoribosyltransferase — —
Ralstonia solanacearum GMI1000 0.54 RS_RS00260 Tyrosine recombinase XerC 1 0.82 RS_RS14445 Anthranilate phosphoribosyltransferase 1 0.31 54
Ralstonia sp. UNC404CL21Col 0.52 ABZR87_RS05065 tyrosine recombinase XerC 0.82 ABZR87_RS02155 anthranilate phosphoribosyltransferase low > 80
Ralstonia solanacearum UW163 0.52 UW163_RS03905 tyrosine recombinase XerC 0.80 UW163_RS07125 anthranilate phosphoribosyltransferase — —
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS09675 tyrosine recombinase XerC 0.80 RALBFv3_RS06500 anthranilate phosphoribosyltransferase — —
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS00355 tyrosine recombinase XerC 0.81 QEN71_RS27560 anthranilate phosphoribosyltransferase — —
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS01655 tyrosine recombinase XerC 0.82 BPHYT_RS17400 anthranilate phosphoribosyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_02202 integrase/recombinase XerC 0.82 H281DRAFT_05713 anthranilate phosphoribosyltransferase — —
Paraburkholderia graminis OAS925 0.43 ABIE53_000426 integrase/recombinase XerC 0.82 ABIE53_003642 anthranilate phosphoribosyltransferase — —
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS21475 recombinase XerC 0.69 HSERO_RS19445 anthranilate phosphoribosyltransferase low > 78
Dechlorosoma suillum PS 0.40 Dsui_0651 tyrosine recombinase XerC 0.67 Dsui_0169 anthranilate phosphoribosyltransferase — —
Acidovorax sp. GW101-3H11 0.38 Ac3H11_1995 Tyrosine recombinase XerC 0.72 Ac3H11_771 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.38 GFF547 Tyrosine recombinase XerC 0.71 GFF3110 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) low > 90
Castellaniella sp019104865 MT123 0.37 ABCV34_RS13455 tyrosine recombinase XerC 0.65 ABCV34_RS10305 anthranilate phosphoribosyltransferase low > 48
Variovorax sp. SCN45 0.36 GFF4490 Site-specific tyrosine recombinase XerC 0.72 GFF5891 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) — —
Variovorax sp. OAS795 0.36 ABID97_RS06150 tyrosine recombinase XerC 0.74 ABID97_RS05275 anthranilate phosphoribosyltransferase low > 91
Pseudomonas sp. S08-1 0.34 OH686_13785 tyrosine recombinase XerC 0.45 OH686_15135 Anthranilate phosphoribosyltransferase low > 80
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_09050 recombinase XerC 0.42 AO353_07215 anthranilate phosphoribosyltransferase low > 101
Pseudomonas stutzeri RCH2 0.33 Psest_3767 tyrosine recombinase XerC 0.47 Psest_3648 anthranilate phosphoribosyltransferase low > 67
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_842 Tyrosine recombinase XerC 0.45 PfGW456L13_1221 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) low > 87
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_12725 recombinase XerC 0.43 AO356_14435 anthranilate phosphoribosyltransferase low > 104
Pseudomonas sp. RS175 0.32 PFR28_04378 Tyrosine recombinase XerC 0.43 PFR28_04044 Anthranilate phosphoribosyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_0185 tyrosine recombinase XerC subunit 0.47 Psyr_4580 anthranilate phosphoribosyltransferase low > 86
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_4416 Tyrosine recombinase XerC 0.43 Pf6N2E2_4825 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_0185 tyrosine recombinase XerC subunit 0.47 Psyr_4580 anthranilate phosphoribosyltransferase low > 86
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_2171 Tyrosine recombinase XerC 0.43 Pf1N1B4_2548 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) low > 87
Pseudomonas putida KT2440 0.32 PP_5230 Tyrosine recombinase XerC 0.46 PP_0421 Anthranilate phosphoribosyltransferase low > 96
Dyella japonica UNC79MFTsu3.2 0.32 ABZR86_RS15025 tyrosine recombinase XerC 0.71 ABZR86_RS12070 anthranilate phosphoribosyltransferase low > 74
Serratia liquefaciens MT49 0.32 IAI46_00725 tyrosine recombinase XerC 0.28 IAI46_14030 anthranilate phosphoribosyltransferase low > 86
Pantoea sp. MT58 0.32 IAI47_18400 tyrosine recombinase XerC 0.28 IAI47_09180 anthranilate phosphoribosyltransferase low > 76
Rhodanobacter sp. FW510-T8 0.31 OKGIIK_15325 xerC tyrosine recombinase XerC 0.70 OKGIIK_12285 trpD anthranilate phosphoribosyltransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.847.1 Site-specific tyrosine recombinase 0.70 Xcc-8004.621.1 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) — —
Rahnella sp. WP5 0.31 EX31_RS15165 tyrosine recombinase XerC 0.29 EX31_RS09965 anthranilate phosphoribosyltransferase low > 89
Lysobacter sp. OAE881 0.31 ABIE51_RS03035 tyrosine recombinase XerC 0.69 ABIE51_RS04180 anthranilate phosphoribosyltransferase low > 62
Dickeya dadantii 3937 0.31 DDA3937_RS19890 tyrosine recombinase XerC 0.28 DDA3937_RS10475 anthranilate phosphoribosyltransferase — —
Rhodanobacter denitrificans MT42 0.31 LRK55_RS08300 tyrosine recombinase XerC 0.69 LRK55_RS11295 anthranilate phosphoribosyltransferase low > 63
Dickeya dianthicola 67-19 0.31 HGI48_RS20045 tyrosine recombinase XerC 0.28 HGI48_RS10475 anthranilate phosphoribosyltransferase low > 71
Shewanella loihica PV-4 0.31 Shew_0325 tyrosine recombinase XerC (RefSeq) 0.30 Shew_2253 anthranilate phosphoribosyltransferase (RefSeq) low > 60
Marinobacter adhaerens HP15 0.31 HP15_250 site-specific tyrosine recombinase XerC 0.43 HP15_3290 anthranilate phosphoribosyltransferase low > 73
Dickeya dianthicola ME23 0.30 DZA65_RS21090 tyrosine recombinase XerC 0.28 DZA65_RS10955 anthranilate phosphoribosyltransferase low > 75
Shewanella oneidensis MR-1 0.30 SO4306 xerC integrase/recombinase XerC (NCBI ptt file) 0.28 SO3021 trpD anthranilate phosphoribosyltransferase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.30 Shewana3_0393 tyrosine recombinase XerC (RefSeq) 0.30 Shewana3_1518 trpD anthranilate phosphoribosyltransferase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.30 Sama_3247 integrase/recombinase XerC (RefSeq) 0.31 Sama_2131 trpD anthranilate phosphoribosyltransferase (RefSeq) low > 62
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS08535 tyrosine recombinase XerC 0.69 LRK54_RS11565 anthranilate phosphoribosyltransferase low > 59
Pseudomonas simiae WCS417 0.29 PS417_27595 recombinase XerC 0.42 PS417_25715 anthranilate phosphoribosyltransferase low > 88
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS29280 tyrosine recombinase XerC 0.42 PFLU_RS27370 anthranilate phosphoribosyltransferase low > 109
Pseudomonas fluorescens SBW25 0.29 PFLU_RS29280 tyrosine recombinase XerC 0.42 PFLU_RS27370 anthranilate phosphoribosyltransferase low > 109
Kangiella aquimarina DSM 16071 0.28 B158DRAFT_0244 tyrosine recombinase XerC subunit 0.30 B158DRAFT_2427 anthranilate phosphoribosyltransferase low > 40
Alteromonas macleodii MIT1002 0.28 MIT1002_00157 Tyrosine recombinase XerC 0.33 MIT1002_01428 Anthranilate synthase component II low > 70
Vibrio cholerae E7946 ATCC 55056 0.26 CSW01_00650 tyrosine recombinase XerC 0.33 CSW01_05940 anthranilate phosphoribosyltransferase low > 62
Bacteroides ovatus ATCC 8483 0.23 BACOVA_01050 site-specific recombinase, phage integrase family/ribosomal subunit interface protein 0.25 BACOVA_03782 anthranilate phosphoribosyltransferase low > 94
Rhodospirillum rubrum S1H 0.22 Rru_A1220 Phage integrase (NCBI) 0.33 Rru_A1896 Anthranilate phosphoribosyl transferase (NCBI) — —
Bifidobacterium breve UCC2003 0.22 BBR_RS16655 tyrosine recombinase XerC 0.25 BBR_RS16510 anthranilate phosphoribosyltransferase low > 34
Dinoroseobacter shibae DFL-12 0.22 Dshi_5002 xerC hypothetical protein (NCBI) 0.31 Dshi_1799 anthranilate phosphoribosyltransferase (RefSeq) — —
Azospirillum brasilense Sp245 0.22 AZOBR_RS03965 tyrosine recombinase XerC 0.37 AZOBR_RS07455 anthranilate phosphoribosyltransferase — —
Rhodopseudomonas palustris CGA009 0.22 TX73_000945 tyrosine recombinase XerC 0.41 TX73_014980 anthranilate phosphoribosyltransferase — —
Rhizobium sp. OAE497 0.21 ABIE40_RS17950 tyrosine recombinase XerC 0.35 ABIE40_RS09545 anthranilate phosphoribosyltransferase low > 107
Magnetospirillum magneticum AMB-1 0.21 AMB_RS21485 tyrosine recombinase XerC 0.33 AMB_RS14410 anthranilate phosphoribosyltransferase — —
Bosea sp. OAE506 0.21 ABIE41_RS07870 tyrosine recombinase XerC 0.32 ABIE41_RS17420 anthranilate phosphoribosyltransferase — —
Azospirillum sp. SherDot2 0.21 MPMX19_02110 Tyrosine recombinase XerC 0.35 MPMX19_01015 Anthranilate phosphoribosyltransferase — —
Phaeobacter inhibens DSM 17395 0.21 PGA1_c05760 putative tyrosine recombinase XerC 0.33 PGA1_c16890 anthranilate phosphoribosyltransferase TrpD — —
Sinorhizobium meliloti 1021 0.20 SMc02489 site-specific tyrosine recombinase XerC 0.35 SMc00235 anthranilate phosphoribosyltransferase — —
Agrobacterium fabrum C58 0.20 Atu2628 site-specific recombinase 0.34 Atu1687 anthranilate phosphoribosyltransferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.19 A4249_RS12210 tyrosine recombinase XerC 0.33 A4249_RS06170 anthranilate phosphoribosyltransferase — —
Sphingomonas koreensis DSMZ 15582 0.19 Ga0059261_2764 Site-specific recombinase XerD 0.26 Ga0059261_0929 anthranilate phosphoribosyltransferase low > 68

Not shown: 19 genomes with orthologs for RR42_RS00615 only; 18 genomes with orthologs for RR42_RS18305 only