| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Cupriavidus basilensis FW507-4G11 | 1.0 | RR42_RS10885 | | DNAase | 1.0 | RR42_RS04880 | | coproporphyrinogen III oxidase | 0.39 | 9 |
| Ralstonia solanacearum GMI1000 | 0.77 | RS_RS09020 | | TatD family deoxyribonuclease | 0.70 | RS_RS10840 | | oxygen-independent coproporphyrinogen III oxidase-like protein | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.76 | RALBFv3_RS01010 | | TatD family deoxyribonuclease | 0.69 | RALBFv3_RS03355 | | oxygen-independent coproporphyrinogen III oxidase-like protein | low | > 76 |
| Ralstonia solanacearum UW163 | 0.76 | UW163_RS14320 | | TatD family deoxyribonuclease | 0.69 | UW163_RS10365 | | oxygen-independent coproporphyrinogen III oxidase-like protein | — | — |
| Ralstonia solanacearum PSI07 | 0.76 | RPSI07_RS16465 | | TatD family deoxyribonuclease | 0.71 | RPSI07_RS13830 | | oxygen-independent coproporphyrinogen III oxidase-like protein | low | > 81 |
| Ralstonia sp. UNC404CL21Col | 0.76 | ABZR87_RS12460 | | TatD family hydrolase | 0.69 | ABZR87_RS15265 | | radical SAM family heme chaperone HemW | 0.43 | 34 |
| Herbaspirillum seropedicae SmR1 | 0.70 | HSERO_RS12995 | | DNAase | 0.66 | HSERO_RS10665 | | coproporphyrinogen III oxidase | low | > 78 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.69 | H281DRAFT_00931 | | TatD DNase family protein | 0.66 | H281DRAFT_04010 | | oxygen-independent coproporphyrinogen-3 oxidase | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.69 | BPHYT_RS09640 | | DNAase | 0.67 | BPHYT_RS15335 | | coproporphyrinogen III oxidase | 0.85 | 3 |
| Paraburkholderia sabiae LMG 24235 | 0.69 | QEN71_RS21805 | | TatD family hydrolase | 0.68 | QEN71_RS03635 | | radical SAM family heme chaperone HemW | 0.80 | 107 |
| Paraburkholderia graminis OAS925 | 0.69 | ABIE53_002166 | | TatD DNase family protein | 0.68 | ABIE53_003236 | | putative oxygen-independent coproporphyrinogen III oxidase | 0.38 | 60 |
| Dechlorosoma suillum PS | 0.68 | Dsui_2652 | | hydrolase, TatD family | 0.55 | Dsui_0491 | | putative oxygen-independent coproporphyrinogen III oxidase | low | > 51 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.62 | GFF4665 | | Putative deoxyribonuclease YcfH | 0.58 | GFF3256 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | low | > 90 |
| Castellaniella sp019104865 MT123 | 0.61 | ABCV34_RS03960 | | TatD family hydrolase | 0.51 | ABCV34_RS03525 | | radical SAM family heme chaperone HemW | low | > 48 |
| Variovorax sp. SCN45 | 0.60 | GFF34 | | Uncharacterized metal-dependent hydrolase YcfH | 0.57 | GFF2383 | | Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW | low | > 127 |
| Acidovorax sp. GW101-3H11 | 0.59 | Ac3H11_2488 | | Putative deoxyribonuclease YcfH | 0.56 | Ac3H11_3672 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | 0.47 | 6 |
| Variovorax sp. OAS795 | 0.58 | ABID97_RS16000 | | TatD family hydrolase | 0.57 | ABID97_RS23630 | | radical SAM family heme chaperone HemW | 0.51 | 6 |
| Kangiella aquimarina DSM 16071 | 0.50 | B158DRAFT_1745 | | hydrolase, TatD family | 0.49 | B158DRAFT_0201 | | coproporphyrinogen III oxidase, anaerobic (EC 1.3.99.22) | 0.47 | 3 |
| Pseudomonas putida KT2440 | 0.48 | PP_1967 | | tRNA D-aminoacylase | 0.45 | PP_5101 | | coproporphyrinogen/heterocyclic compound oxidase (aerobic) | low | > 96 |
| Shewanella amazonensis SB2B | 0.48 | Sama_2040 | | TatD family hydrolase (RefSeq) | 0.41 | Sama_2483 | | oxygen-independent coproporphyrinogen III oxidase, putative (RefSeq) | low | > 62 |
| Pseudomonas fluorescens GW456-L13 | 0.48 | PfGW456L13_2112 | | Putative deoxyribonuclease YcfH | 0.47 | PfGW456L13_1003 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | low | > 87 |
| Pseudomonas sp. S08-1 | 0.48 | OH686_22180 | | Uncharacterized metal-dependent hydrolase YcfH | 0.44 | OH686_11020 | | Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW | low | > 80 |
| Pseudomonas fluorescens FW300-N2E3 | 0.48 | AO353_01325 | | hydrolase TatD | 0.48 | AO353_08200 | | coproporphyrinogen III oxidase | low | > 101 |
| Pseudomonas stutzeri RCH2 | 0.47 | Psest_1696 | | hydrolase, TatD family | 0.44 | Psest_0276 | | putative oxygen-independent coproporphyrinogen III oxidase | low | > 67 |
| Pseudomonas fluorescens SBW25-INTG | 0.47 | PFLU_RS23020 | | TatD family hydrolase | 0.48 | PFLU_RS28405 | | radical SAM family heme chaperone HemW | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.47 | PFLU_RS23020 | | TatD family hydrolase | 0.48 | PFLU_RS28405 | | radical SAM family heme chaperone HemW | low | > 109 |
| Pseudomonas simiae WCS417 | 0.47 | PS417_21405 | | hydrolase TatD | 0.48 | PS417_26760 | | oxidase | 0.16 | 24 |
| Azospirillum brasilense Sp245 | 0.47 | AZOBR_RS08795 | | LuxR family transcriptional regulator | 0.30 | AZOBR_RS02195 | | coproporphyrinogen III oxidase | 0.37 | 25 |
| Azospirillum sp. SherDot2 | 0.47 | MPMX19_01469 | | putative metal-dependent hydrolase YcfH | 0.28 | MPMX19_02574 | | Heme chaperone HemW | low | > 112 |
| Pseudomonas fluorescens FW300-N2E2 | 0.46 | Pf6N2E2_5960 | | Putative deoxyribonuclease YcfH | 0.47 | Pf6N2E2_4593 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.46 | AO356_20205 | | hydrolase TatD | 0.46 | AO356_13390 | | coproporphyrinogen III oxidase | low | > 104 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.46 | Psyr_1655 | | TatD-related deoxyribonuclease | 0.43 | Psyr_0471 | | coproporphyrinogen III oxidase, anaerobic | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.46 | Psyr_1655 | | TatD-related deoxyribonuclease | 0.43 | Psyr_0471 | | coproporphyrinogen III oxidase, anaerobic | low | > 86 |
| Pseudomonas sp. RS175 | 0.46 | PFR28_03002 | | putative metal-dependent hydrolase YcfH | 0.46 | PFR28_04249 | | Heme chaperone HemW | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.46 | Pf1N1B4_420 | | Putative deoxyribonuclease YcfH | 0.48 | Pf1N1B4_2334 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | low | > 87 |
| Rahnella sp. WP5 | 0.46 | EX31_RS24470 | | metal-dependent hydrolase | 0.45 | EX31_RS02710 | | radical SAM family heme chaperone HemW | low | > 89 |
| Vibrio cholerae E7946 ATCC 55056 | 0.45 | CSW01_10060 | | YchF/TatD family DNA exonuclease | 0.42 | CSW01_02425 | | YggW family oxidoreductase | low | > 62 |
| Dickeya dadantii 3937 | 0.45 | DDA3937_RS13085 | | metal-dependent hydrolase | 0.46 | DDA3937_RS17325 | | radical SAM family heme chaperone HemW | low | > 74 |
| Shewanella loihica PV-4 | 0.44 | Shew_1582 | | TatD family hydrolase (RefSeq) | 0.41 | Shew_1131 | | putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) | low | > 60 |
| Shewanella oneidensis MR-1 | 0.44 | SO2610 | | hydrolase, TatD family (NCBI ptt file) | 0.44 | SO3359 | | oxygen-independent coproporphyrinogen III oxidase, putative (NCBI ptt file) | low | > 76 |
| Dickeya dianthicola ME23 | 0.44 | DZA65_RS13620 | | metal-dependent hydrolase | 0.45 | DZA65_RS18460 | | radical SAM family heme chaperone HemW | low | > 75 |
| Serratia liquefaciens MT49 | 0.44 | IAI46_09825 | | metal-dependent hydrolase | 0.46 | IAI46_21435 | | radical SAM family heme chaperone HemW | low | > 86 |
| Dickeya dianthicola 67-19 | 0.44 | HGI48_RS13150 | | metal-dependent hydrolase | 0.45 | HGI48_RS17370 | | radical SAM family heme chaperone HemW | low | > 71 |
| Shewanella sp. ANA-3 | 0.44 | Shewana3_1769 | | TatD family hydrolase (RefSeq) | 0.44 | Shewana3_1188 | | putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) | low | > 73 |
| Klebsiella michiganensis M5al | 0.43 | BWI76_RS11125 | | metal-dependent hydrolase | 0.46 | BWI76_RS24120 | | YggW family oxidoreductase | 0.17 | 49 |
| Erwinia tracheiphila SCR3 | 0.43 | LU632_RS14785 | | metal-dependent hydrolase | 0.45 | LU632_RS05445 | hemW | radical SAM family heme chaperone HemW | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.43 | HER17_RS08685 | | metal-dependent hydrolase | 0.47 | HER17_RS03785 | | radical SAM family heme chaperone HemW | low | > 75 |
| Pantoea sp. MT58 | 0.43 | IAI47_12035 | | metal-dependent hydrolase | 0.45 | IAI47_03580 | | radical SAM family heme chaperone HemW | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.43 | MIT1002_01740 | | putative deoxyribonuclease YcfH | 0.40 | MIT1002_00939 | | Oxygen-independent coproporphyrinogen-III oxidase 1 | low | > 70 |
| Escherichia coli BL21 | 0.42 | ECD_01096 | | putative DNase | 0.45 | ECD_02785 | | HemN family putative oxidoreductase | low | > 61 |
| Escherichia coli ECOR38 | 0.42 | HEPCGN_23940 | ycfH | metal-dependent hydrolase | 0.45 | HEPCGN_18540 | hemW | radical SAM family heme chaperone HemW | low | > 87 |
| Escherichia coli BW25113 | 0.42 | b1100 | ycfH | predicted metallodependent hydrolase (NCBI) | 0.45 | b2955 | yggW | coproporphyrinogen III oxidase (NCBI) | low | > 76 |
| Escherichia coli ECRC102 | 0.42 | NIAGMN_24290 | ycfH | metal-dependent hydrolase | 0.45 | NIAGMN_17000 | hemW | radical SAM family heme chaperone HemW | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.42 | OHPLBJKB_02566 | | putative metal-dependent hydrolase YcfH | 0.45 | OHPLBJKB_00761 | | Oxygen-independent coproporphyrinogen-III oxidase-like protein YqeR | low | > 73 |
| Escherichia coli ECRC98 | 0.42 | JDDGAC_07200 | ycfH | metal-dependent hydrolase | 0.45 | JDDGAC_22865 | hemW | radical SAM family heme chaperone HemW | low | > 86 |
| Escherichia coli ECRC101 | 0.42 | MCAODC_22900 | ycfH | metal-dependent hydrolase | 0.45 | MCAODC_09755 | hemW | radical SAM family heme chaperone HemW | low | > 87 |
| Escherichia coli Nissle 1917 | 0.42 | ECOLIN_RS06350 | | metal-dependent hydrolase | 0.45 | ECOLIN_RS16435 | | radical SAM family heme chaperone HemW | low | > 55 |
| Escherichia coli ECRC99 | 0.42 | KEDOAH_24215 | ycfH | metal-dependent hydrolase | 0.45 | KEDOAH_08905 | hemW | radical SAM family heme chaperone HemW | — | — |
| Escherichia coli ECRC100 | 0.42 | OKFHMN_03540 | ycfH | metal-dependent hydrolase | 0.45 | OKFHMN_19235 | hemW | radical SAM family heme chaperone HemW | low | > 80 |
| Escherichia coli ECRC62 | 0.42 | BNILDI_19230 | ycfH | metal-dependent hydrolase | 0.45 | BNILDI_09685 | hemW | radical SAM family heme chaperone HemW | low | > 75 |
| Escherichia coli ECOR27 | 0.42 | NOLOHH_21070 | ycfH | metal-dependent hydrolase | 0.45 | NOLOHH_11105 | hemW | radical SAM family heme chaperone HemW | — | — |
| Enterobacter sp. TBS_079 | 0.42 | MPMX20_01780 | | putative metal-dependent hydrolase YcfH | 0.46 | MPMX20_03813 | | Heme chaperone HemW | low | > 85 |
| Escherichia fergusonii Becca | 0.42 | EFB2_02875 | | putative metal-dependent hydrolase YcfH | 0.45 | EFB2_00947 | | Heme chaperone HemW | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.42 | GFF3382 | | Putative deoxyribonuclease YcfH | 0.45 | GFF3058 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | low | > 78 |
| Rhodopseudomonas palustris CGA009 | 0.42 | TX73_014390 | | TatD family hydrolase | 0.28 | TX73_001700 | | radical SAM family heme chaperone HemW | — | — |
| Magnetospirillum magneticum AMB-1 | 0.41 | AMB_RS12295 | | TatD family deoxyribonuclease | 0.26 | AMB_RS22770 | | radical SAM protein | low | > 64 |
| Enterobacter asburiae PDN3 | 0.41 | EX28DRAFT_1829 | | hydrolase, TatD family | 0.46 | EX28DRAFT_2993 | | putative oxygen-independent coproporphyrinogen III oxidase | low | > 76 |
| Rhodospirillum rubrum S1H | 0.41 | Rru_A1700 | | TatD-related deoxyribonuclease (NCBI) | 0.27 | Rru_A3639 | | Putative oxygen-independent coproporphyrinogen III oxidase (NCBI) | low | > 58 |
| Acinetobacter radioresistens SK82 | 0.40 | MPMX26_01224 | | putative metal-dependent hydrolase YcfH | 0.39 | MPMX26_00308 | | Heme chaperone HemW | low | > 36 |
| Phaeobacter inhibens DSM 17395 | 0.39 | PGA1_c07990 | | putative hydrolase, TatD family | 0.29 | PGA1_c35050 | | oxygen-independent coproporphyrinogen III oxidase HemN | low | > 62 |
| Dinoroseobacter shibae DFL-12 | 0.38 | Dshi_0920 | | hydrolase, TatD family (RefSeq) | 0.29 | Dshi_3460 | | putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) | low | > 64 |
| Bosea sp. OAE506 | 0.37 | ABIE41_RS15945 | | TatD family hydrolase | 0.28 | ABIE41_RS03305 | | radical SAM family heme chaperone HemW | low | > 77 |
| Agrobacterium fabrum C58 | 0.36 | Atu1495 | | hypothetical protein | 0.29 | Atu0325 | | oxygen-independent coproporphyrinogen III oxidase | — | — |
| Rhizobium sp. OAE497 | 0.35 | ABIE40_RS09480 | | TatD family hydrolase | 0.29 | ABIE40_RS01625 | | radical SAM family heme chaperone HemW | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.32 | A4249_RS04755 | | TatD family hydrolase | 0.25 | A4249_RS12445 | | radical SAM family heme chaperone HemW | low | > 48 |
| Marinobacter adhaerens HP15 | 0.31 | HP15_3420 | | hydrolase, TatD family | 0.39 | HP15_280 | | putative oxygen-independent coproporphyrinogen III oxidase | low | > 73 |
| Caulobacter crescentus NA1000 Δfur | 0.30 | CCNA_01898 | | Mg-dependent Dnase TatD | 0.25 | CCNA_00144 | | oxygen-independent coproporphyrinogen-III oxidase | low | > 67 |
| Caulobacter crescentus NA1000 | 0.30 | CCNA_01898 | | Mg-dependent Dnase TatD | 0.25 | CCNA_00144 | | oxygen-independent coproporphyrinogen-III oxidase | 0.43 | 6 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.27 | CA265_RS25085 | | hydrolase TatD | 0.21 | CA265_RS18155 | | coproporphyrinogen III oxidase | low | > 88 |
| Desulfovibrio vulgaris Miyazaki F | 0.27 | DvMF_2230 | | hydrolase, TatD family (RefSeq) | 0.20 | DvMF_2374 | | oxygen-independent coproporphyrinogen III oxidase (RefSeq) | low | > 51 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.24 | Echvi_0081 | | hydrolase, TatD family | 0.20 | Echvi_0628 | | putative oxygen-independent coproporphyrinogen III oxidase | 0.36 | 4 |
| Parabacteroides merdae CL09T00C40 | 0.22 | HMPREF1078_RS11120 | | TatD family hydrolase | 0.22 | HMPREF1078_RS11035 | | radical SAM family heme chaperone HemW | 0.80 | 14 |
| Phocaeicola vulgatus CL09T03C04 | 0.21 | HMPREF1058_RS14230 | | TatD family hydrolase | 0.21 | HMPREF1058_RS07680 | | radical SAM family heme chaperone HemW | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.21 | ABI39_RS09860 | | TatD family hydrolase | 0.21 | ABI39_RS00100 | | radical SAM family heme chaperone HemW | low | > 72 |
Not shown: 10 genomes with orthologs for RR42_RS10885 only; 8 genomes with orthologs for RR42_RS04880 only