Conservation of cofitness between QEN71_RS03085 and QEN71_RS28845 in Paraburkholderia sabiae LMG 24235

74 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS03085 DNA repair protein RadC 1.0 QEN71_RS28845 flagellar type III secretion system pore protein FliP 0.65 16
Paraburkholderia bryophila 376MFSha3.1 0.74 H281DRAFT_04066 DNA replication and repair protein RadC 0.86 H281DRAFT_05776 flagellar biosynthetic protein FliP low > 103
Paraburkholderia graminis OAS925 0.74 ABIE53_003289 DNA repair protein RadC 0.87 ABIE53_000084 flagellar biosynthetic protein FliP low > 113
Burkholderia phytofirmans PsJN 0.70 BPHYT_RS15625 hypothetical protein 0.85 BPHYT_RS18825 flagellar biosynthesis protein FliP low > 109
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS00330 DNA repair protein RadC 0.58 ABZR87_RS22210 flagellar type III secretion system pore protein FliP low > 80
Ralstonia solanacearum GMI1000 0.48 RS_RS12270 JAB domain-containing protein 0.59 RS_RS18960 flagellar biosynthetic protein FliP low > 80
Ralstonia solanacearum PSI07 0.48 RPSI07_RS12675 JAB domain-containing protein 0.59 RPSI07_RS01460 flagellar biosynthetic protein FliP low > 81
Ralstonia solanacearum UW163 0.48 UW163_RS08960 JAB domain-containing protein 0.59 UW163_RS17520 flagellar biosynthetic protein FliP — —
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS04710 JAB domain-containing protein 0.59 RALBFv3_RS21665 flagellar biosynthetic protein FliP low > 76
Pseudomonas stutzeri RCH2 0.48 Psest_3803 DNA repair protein radc 0.54 Psest_1732 flagellar biosynthetic protein FliP low > 67
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS29445 JAB domain-containing protein 0.52 PFLU_RS21710 flagellar type III secretion system pore protein FliP low > 109
Pseudomonas sp. RS175 0.47 PFR28_04412 hypothetical protein 0.52 PFR28_00845 Flagellar biosynthetic protein FliP low > 88
Pseudomonas fluorescens SBW25 0.47 PFLU_RS29445 JAB domain-containing protein 0.52 PFLU_RS21710 flagellar type III secretion system pore protein FliP low > 109
Pseudomonas simiae WCS417 0.47 PS417_27770 hypothetical protein 0.52 PS417_19740 flagellar biosynthesis protein flip low > 88
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_09220 hypothetical protein 0.54 AO353_18745 flagellar biosynthesis protein flip low > 101
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_2126 DNA repair protein RadC 0.52 Pf1N1B4_3618 Flagellar biosynthesis protein FliP — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF1170 DNA repair protein RadC 0.57 GFF1461 Flagellar biosynthesis protein FliP low > 90
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_12545 hypothetical protein 0.52 AO356_03770 flagellar biosynthesis protein flip 0.29 17
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS16995 hypothetical protein 0.64 RR42_RS23360 flagellar biosynthesis protein flip low > 128
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_4377 DNA repair protein RadC 0.51 Pf6N2E2_2580 Flagellar biosynthesis protein FliP low > 103
Dechlorosoma suillum PS 0.45 Dsui_1537 DNA repair protein radc 0.46 Dsui_1746 flagellar biosynthetic protein FliP low > 51
Pseudomonas putida KT2440 0.45 PP_5284 UPF0758 protein PP_5284 0.54 PP_4355 flagellar export apparatus subunit low > 96
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_798 DNA repair protein RadC 0.54 PfGW456L13_4339 Flagellar biosynthesis protein FliP low > 87
Variovorax sp. SCN45 0.44 GFF5700 UPF0758 family protein 0.67 GFF5740 Flagellar biosynthesis protein FliP — —
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS05945 hypothetical protein 0.64 HSERO_RS10260 flagellar biosynthesis protein FliP low > 78
Pseudomonas sp. S08-1 0.43 OH686_13620 UPF0758 family protein 0.53 OH686_02770 flagellar biosynthetic protein FliP low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_0222 DNA replication and repair protein RadC 0.52 Psyr_3444 Flagellar transport protein FliP low > 86
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_0222 DNA replication and repair protein RadC 0.52 Psyr_3444 Flagellar transport protein FliP — —
Marinobacter adhaerens HP15 0.42 HP15_3321 DNA repair protein RadC-like protein 0.53 HP15_2312 flagellar biosynthesis protein FliP low > 73
Dickeya dianthicola 67-19 0.42 HGI48_RS00700 DNA repair protein RadC 0.62 HGI48_RS13460 flagellar type III secretion system pore protein FliP low > 71
Dickeya dianthicola ME23 0.42 DZA65_RS00755 JAB domain-containing protein 0.62 DZA65_RS13945 flagellar type III secretion system pore protein FliP low > 75
Rhodanobacter denitrificans MT42 0.42 LRK55_RS08695 DNA repair protein RadC 0.51 LRK55_RS13285 flagellar type III secretion system pore protein FliP low > 63
Dickeya dadantii 3937 0.42 DDA3937_RS20515 DNA repair protein RadC 0.63 DDA3937_RS13415 flagellar type III secretion system pore protein FliP low > 74
Rhodanobacter denitrificans FW104-10B01 0.42 LRK54_RS09165 DNA repair protein RadC 0.51 LRK54_RS13545 flagellar type III secretion system pore protein FliP low > 59
Shewanella amazonensis SB2B 0.42 Sama_0327 radC DNA repair protein RadC (RefSeq) 0.55 Sama_2287 fliP flagellar biosynthesis protein FliP (RefSeq) low > 62
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS15615 DNA repair protein RadC 0.56 ABZR86_RS20230 flagellar type III secretion system pore protein FliP low > 74
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_15660 radC DNA repair protein RadC 0.49 OKGIIK_02795 fliP flagellar type III secretion system pore protein FliP low > 52
Pantoea sp. MT58 0.41 IAI47_00620 DNA repair protein RadC 0.61 IAI47_07980 flagellar type III secretion system pore protein FliP low > 76
Rahnella sp. WP5 0.41 EX31_RS14470 JAB domain-containing protein 0.58 EX31_RS09590 flagellar type III secretion system pore protein FliP low > 89
Shewanella loihica PV-4 0.40 Shew_3481 DNA repair protein RadC (RefSeq) 0.57 Shew_1376 fliP flagellar biosynthesis protein FliP (RefSeq) low > 60
Acidovorax sp. GW101-3H11 0.40 Ac3H11_1774 DNA repair protein RadC 0.56 Ac3H11_1414 Flagellar biosynthesis protein FliP low > 79
Pectobacterium carotovorum WPP14 0.40 HER17_RS20830 DNA repair protein RadC 0.60 HER17_RS08230 flagellar type III secretion system pore protein FliP 0.46 73
Serratia liquefaciens MT49 0.39 IAI46_24825 DNA repair protein RadC 0.63 IAI46_15890 flagellar type III secretion system pore protein FliP low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_00064 hypothetical protein 0.63 OHPLBJKB_01781 Flagellar biosynthetic protein FliP low > 73
Escherichia coli ECRC101 0.39 MCAODC_06130 radC DNA repair protein RadC 0.63 MCAODC_19730 fliP flagellar type III secretion system pore protein FliP low > 87
Escherichia coli ECRC62 0.39 BNILDI_04015 radC DNA repair protein RadC 0.63 BNILDI_15085 fliP flagellar type III secretion system pore protein FliP low > 75
Escherichia coli ECRC102 0.39 NIAGMN_13380 radC DNA repair protein RadC 0.63 NIAGMN_02390 fliP flagellar type III secretion system pore protein FliP — —
Escherichia coli ECOR27 0.39 NOLOHH_07500 radC DNA repair protein RadC 0.63 NOLOHH_16295 fliP flagellar type III secretion system pore protein FliP low > 75
Escherichia coli ECRC100 0.39 OKFHMN_15620 radC DNA repair protein RadC 0.63 OKFHMN_25665 fliP flagellar type III secretion system pore protein FliP low > 80
Escherichia coli BW25113 0.39 b3638 radC DNA repair protein (VIMSS) 0.63 b1948 fliP flagellar biosynthesis protein P (NCBI) low > 76
Escherichia coli ECOR38 0.39 HEPCGN_14445 radC DNA repair protein RadC 0.63 HEPCGN_04025 fliP flagellar type III secretion system pore protein FliP low > 87
Escherichia coli ECRC99 0.39 KEDOAH_12530 radC DNA repair protein RadC 0.63 KEDOAH_02430 fliP flagellar type III secretion system pore protein FliP — —
Escherichia fergusonii Becca 0.39 EFB2_00175 hypothetical protein 0.63 EFB2_01998 Flagellar biosynthetic protein FliP low > 86
Escherichia coli ECRC98 0.39 JDDGAC_19245 radC DNA repair protein RadC 0.63 JDDGAC_00250 fliP flagellar type III secretion system pore protein FliP low > 86
Escherichia coli Nissle 1917 0.39 ECOLIN_RS20730 DNA repair protein RadC 0.63 ECOLIN_RS11110 flagellar type III secretion system pore protein FliP — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.39 GFF371 DNA repair protein RadC 0.63 GFF4008 Flagellar biosynthesis protein FliP low > 78
Shewanella oneidensis MR-1 0.38 SO4248 radC DNA repair protein RadC (NCBI ptt file) 0.54 SO3218 fliP flagellar biosynthetic protein FliP (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.38 Shewana3_3770 radC DNA repair protein RadC (RefSeq) 0.53 Shewana3_1352 fliP flagellar biosynthesis protein FliP (RefSeq) — —
Xanthomonas campestris pv. campestris strain 8004 0.37 Xcc-8004.4897.1 DNA repair protein RadC 0.41 Xcc-8004.2819.1 Flagellar biosynthesis protein FliP low > 74
Enterobacter asburiae PDN3 0.36 EX28DRAFT_3888 DNA repair protein radc 0.61 EX28DRAFT_0606 flagellar biosynthetic protein FliP low > 76
Enterobacter sp. TBS_079 0.36 MPMX20_00097 hypothetical protein 0.61 MPMX20_02945 Flagellar biosynthetic protein FliP low > 85
Erwinia tracheiphila SCR3 0.36 LU632_RS21995 radC DNA repair protein RadC 0.59 LU632_RS10525 fliP flagellar type III secretion system pore protein FliP low > 74
Alteromonas macleodii MIT1002 0.36 MIT1002_00049 DNA repair protein RadC 0.48 MIT1002_01095 Flagellar biosynthetic protein FliP precursor low > 70
Castellaniella sp019104865 MT123 0.35 ABCV34_RS00910 DNA repair protein RadC 0.60 ABCV34_RS05695 flagellar type III secretion system pore protein FliP low > 48
Lysobacter sp. OAE881 0.35 ABIE51_RS00095 DNA repair protein RadC 0.39 ABIE51_RS16830 flagellar type III secretion system pore protein FliP low > 62
Phaeobacter inhibens DSM 17395 0.30 PGA1_c34550 DNA repair protein RadC 0.36 PGA1_c35610 flagellar biosynthetic protein FliP low > 62
Rhodospirillum rubrum S1H 0.29 Rru_A0732 DNA repair protein RadC (NCBI) 0.39 Rru_A2830 Flagellar transport protein FliP (NCBI) — —
Dinoroseobacter shibae DFL-12 0.28 Dshi_3569 DNA repair protein RadC (RefSeq) 0.37 Dshi_3267 flagellar biosynthetic protein FliP (RefSeq) low > 64
Brevundimonas sp. GW460-12-10-14-LB2 0.27 A4249_RS00510 DNA repair protein RadC 0.44 A4249_RS16010 flagellar type III secretion system pore protein FliP low > 48
Azospirillum sp. SherDot2 0.26 MPMX19_00291 hypothetical protein 0.45 MPMX19_00858 Flagellar biosynthetic protein FliP low > 112
Sinorhizobium meliloti 1021 0.26 SMc00299 DNA repair protein RadC 0.40 SMc03036 flagellar biosynthesis protein FliP low > 103
Rhodopseudomonas palustris CGA009 0.26 TX73_002000 DNA repair protein RadC 0.47 TX73_020170 flagellar type III secretion system pore protein FliP low > 86
Azospirillum brasilense Sp245 0.25 AZOBR_RS04400 DNA repair protein RadC 0.42 AZOBR_RS32035 flagellar biosynthesis protein FliP — —
Bosea sp. OAE506 0.25 ABIE41_RS13815 DNA repair protein RadC 0.48 ABIE41_RS13385 flagellar type III secretion system pore protein FliP low > 77
Desulfovibrio vulgaris Hildenborough JW710 0.25 DVU1193 radC DNA repair protein RadC (TIGR) 0.37 DVU0044 fliP flagellar biosynthetic protein fliP (TIGR) low > 55

Not shown: 19 genomes with orthologs for QEN71_RS03085 only; 5 genomes with orthologs for QEN71_RS28845 only