| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Paraburkholderia sabiae LMG 24235 | 1.0 | QEN71_RS02745 | | tRNA epoxyqueuosine(34) reductase QueG | 1.0 | QEN71_RS06410 | | [protein-PII] uridylyltransferase | 0.60 | 3 |
| Paraburkholderia graminis OAS925 | 0.76 | ABIE53_003363 | | epoxyqueuosine reductase | 0.90 | ABIE53_002507 | | [protein-PII] uridylyltransferase | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.75 | H281DRAFT_04128 | | epoxyqueuosine reductase | 0.90 | H281DRAFT_00608 | | UTP--GlnB (protein PII) uridylyltransferase, GlnD | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.75 | BPHYT_RS15960 | | iron-sulfur cluster binding protein | 0.90 | BPHYT_RS12150 | | PII uridylyl-transferase | 0.45 | 42 |
| Herbaspirillum seropedicae SmR1 | 0.56 | HSERO_RS04220 | | epoxyqueuosine reductase | 0.62 | HSERO_RS10865 | | PII uridylyl-transferase | low | > 78 |
| Ralstonia solanacearum IBSBF1503 | 0.54 | RALBFv3_RS05120 | | tRNA epoxyqueuosine(34) reductase QueG | 0.66 | RALBFv3_RS00365 | | [protein-PII] uridylyltransferase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.54 | UW163_RS08505 | | tRNA epoxyqueuosine(34) reductase QueG | 0.66 | UW163_RS13695 | | [protein-PII] uridylyltransferase | — | — |
| Ralstonia solanacearum PSI07 | 0.54 | RPSI07_RS12175 | | tRNA epoxyqueuosine(34) reductase QueG | 0.66 | RPSI07_RS17110 | | [protein-PII] uridylyltransferase | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.54 | RS_RS12740 | | tRNA epoxyqueuosine(34) reductase QueG | 0.67 | RS_RS07035 | | bifunctional uridylyltransferase/uridylyl-removing protein | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.53 | RR42_RS03405 | | epoxyqueuosine reductase | 0.66 | RR42_RS11885 | | (protein-PII) uridylyltransferase | low | > 128 |
| Ralstonia sp. UNC404CL21Col | 0.53 | ABZR87_RS00775 | | tRNA epoxyqueuosine(34) reductase QueG | 0.66 | ABZR87_RS11815 | | [protein-PII] uridylyltransferase | low | > 80 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.52 | GFF5474 | | Epoxyqueuosine (oQ) reductase QueG | 0.58 | GFF4563 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | low | > 90 |
| Acidovorax sp. GW101-3H11 | 0.50 | Ac3H11_306 | | Epoxyqueuosine (oQ) reductase QueG | 0.58 | Ac3H11_537 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | low | > 79 |
| Variovorax sp. OAS795 | 0.48 | ABID97_RS20285 | | tRNA epoxyqueuosine(34) reductase QueG | 0.58 | ABID97_RS15665 | | [protein-PII] uridylyltransferase | low | > 91 |
| Pseudomonas sp. S08-1 | 0.48 | OH686_09500 | | epoxyqueuosine reductase | 0.34 | OH686_06495 | | protein-P-II uridylyltransferase | low | > 80 |
| Castellaniella sp019104865 MT123 | 0.48 | ABCV34_RS13905 | | tRNA epoxyqueuosine(34) reductase QueG | 0.48 | ABCV34_RS04120 | | [protein-PII] uridylyltransferase | low | > 48 |
| Pseudomonas syringae pv. syringae B728a | 0.48 | Psyr_0566 | | 4Fe-4S cluster binding protein | 0.31 | Psyr_1341 | | Protein-P-II uridylyltransferase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.48 | Psyr_0566 | | 4Fe-4S cluster binding protein | 0.31 | Psyr_1341 | | Protein-P-II uridylyltransferase | low | > 86 |
| Pseudomonas simiae WCS417 | 0.47 | PS417_02460 | | epoxyqueuosine reductase | 0.33 | PS417_06200 | | protein-PII uridylyltransferase | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.47 | PFLU_RS02540 | | tRNA epoxyqueuosine(34) reductase QueG | 0.32 | PFLU_RS06265 | | [protein-PII] uridylyltransferase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.47 | PFLU_RS02540 | | tRNA epoxyqueuosine(34) reductase QueG | 0.32 | PFLU_RS06265 | | [protein-PII] uridylyltransferase | low | > 109 |
| Dyella japonica UNC79MFTsu3.2 | 0.47 | ABZR86_RS00835 | | tRNA epoxyqueuosine(34) reductase QueG | 0.29 | ABZR86_RS21575 | | [protein-PII] uridylyltransferase | low | > 74 |
| Pseudomonas fluorescens FW300-N2E3 | 0.47 | AO353_13115 | | epoxyqueuosine reductase | 0.33 | AO353_16450 | | protein-PII uridylyltransferase | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.47 | Pf1N1B4_1418 | | Epoxyqueuosine (oQ) reductase QueG | 0.33 | Pf1N1B4_3081 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.47 | PfGW456L13_160 | | Epoxyqueuosine (oQ) reductase QueG | 0.33 | PfGW456L13_4711 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | low | > 87 |
| Pseudomonas sp. RS175 | 0.47 | PFR28_05115 | | Epoxyqueuosine reductase | 0.32 | PFR28_00394 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | low | > 88 |
| Rhodanobacter sp. FW510-T8 | 0.46 | OKGIIK_03900 | queG | tRNA epoxyqueuosine(34) reductase QueG | 0.27 | OKGIIK_10125 | glnD | [protein-PII] uridylyltransferase | low | > 52 |
| Pseudomonas fluorescens FW300-N2C3 | 0.46 | AO356_08685 | | epoxyqueuosine reductase | 0.33 | AO356_06050 | | protein-PII uridylyltransferase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.46 | Pf6N2E2_3620 | | Epoxyqueuosine (oQ) reductase QueG | 0.33 | Pf6N2E2_3072 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | 0.28 | 44 |
| Pseudomonas stutzeri RCH2 | 0.46 | Psest_0677 | | iron-sulfur cluster binding protein, putative | 0.33 | Psest_2845 | | [Protein-PII] uridylyltransferase | low | > 67 |
| Rhodanobacter denitrificans FW104-10B01 | 0.45 | LRK54_RS15130 | | tRNA epoxyqueuosine(34) reductase QueG | 0.28 | LRK54_RS03245 | | [protein-PII] uridylyltransferase | — | — |
| Marinobacter adhaerens HP15 | 0.45 | HP15_2505 | | iron-sulfur cluster binding protein | 0.30 | HP15_1163 | | [protein-PII] uridylyltransferase | low | > 73 |
| Rhodanobacter denitrificans MT42 | 0.45 | LRK55_RS14845 | | tRNA epoxyqueuosine(34) reductase QueG | 0.28 | LRK55_RS02995 | | [protein-PII] uridylyltransferase | — | — |
| Variovorax sp. SCN45 | 0.45 | GFF4805 | | Epoxyqueuosine reductase (EC 1.17.99.6) QueG | 0.58 | GFF1322 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) / [Protein-PII]-UMP uridylyl-removing enzyme | low | > 127 |
| Escherichia coli ECOR27 | 0.44 | NOLOHH_04550 | queG | tRNA epoxyqueuosine(34) reductase QueG | 0.29 | NOLOHH_02580 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia coli BL21 | 0.44 | ECD_04033 | | epoxyqueuosine reductase, cobalamine-stimulated; queosine biosynthesis | 0.30 | ECD_00165 | | uridylyltransferase | low | > 61 |
| Klebsiella michiganensis M5al | 0.44 | BWI76_RS02505 | | tRNA epoxyqueuosine(34) reductase QueG | 0.29 | BWI76_RS05200 | | bifunctional uridylyltransferase/uridylyl-removing protein | low | > 92 |
| Escherichia coli ECRC62 | 0.44 | BNILDI_06940 | queG | tRNA epoxyqueuosine(34) reductase QueG | 0.29 | BNILDI_09090 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.44 | OHPLBJKB_03876 | | Epoxyqueuosine reductase | 0.29 | OHPLBJKB_03497 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | low | > 73 |
| Pseudomonas putida KT2440 | 0.44 | PP_4900 | | epoxyqueuosine reductase | 0.33 | PP_1589 | | uridylyltransferase | low | > 96 |
| Escherichia coli BW25113 | 0.44 | b4166 | yjeS | predicted Fe-S electron transport protein (NCBI) | 0.29 | b0167 | glnD | PII uridylyl-transferase (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.43 | HEPCGN_10515 | queG | tRNA epoxyqueuosine(34) reductase QueG | 0.29 | HEPCGN_08185 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia coli ECRC100 | 0.43 | OKFHMN_12285 | queG | tRNA epoxyqueuosine(34) reductase QueG | 0.29 | OKFHMN_10235 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia coli ECRC98 | 0.43 | JDDGAC_15925 | queG | tRNA epoxyqueuosine(34) reductase QueG | 0.29 | JDDGAC_13830 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia coli ECRC102 | 0.43 | NIAGMN_10135 | queG | tRNA epoxyqueuosine(34) reductase QueG | 0.29 | NIAGMN_08085 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia coli ECRC99 | 0.43 | KEDOAH_15870 | queG | tRNA epoxyqueuosine(34) reductase QueG | 0.29 | KEDOAH_17920 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia coli Nissle 1917 | 0.43 | ECOLIN_RS24200 | | tRNA epoxyqueuosine(34) reductase QueG | 0.29 | ECOLIN_RS00915 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia fergusonii Becca | 0.43 | EFB2_04369 | | Epoxyqueuosine reductase | 0.29 | EFB2_03878 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | — | — |
| Alteromonas macleodii MIT1002 | 0.43 | MIT1002_03794 | | Epoxyqueuosine reductase | 0.28 | MIT1002_01001 | | PII uridylyl-transferase | low | > 70 |
| Escherichia coli ECRC101 | 0.43 | MCAODC_02800 | queG | tRNA epoxyqueuosine(34) reductase QueG | 0.29 | MCAODC_00750 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Dechlorosoma suillum PS | 0.43 | Dsui_3502 | | iron-sulfur cluster binding protein, putative | 0.51 | Dsui_2696 | | (protein-PII) uridylyltransferase | low | > 51 |
| Enterobacter asburiae PDN3 | 0.43 | EX28DRAFT_3363 | | epoxyqueuosine reductase | 0.30 | EX28DRAFT_3754 | | UTP--GlnB (protein PII) uridylyltransferase, GlnD | 0.50 | 51 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.43 | GFF819 | | Epoxyqueuosine (oQ) reductase QueG | 0.29 | GFF55 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | 0.67 | 20 |
| Enterobacter sp. TBS_079 | 0.43 | MPMX20_00447 | | Epoxyqueuosine reductase | 0.30 | MPMX20_00851 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | — | — |
| Serratia liquefaciens MT49 | 0.43 | IAI46_01595 | | tRNA epoxyqueuosine(34) reductase QueG | 0.29 | IAI46_20270 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 86 |
| Dickeya dadantii 3937 | 0.43 | DDA3937_RS18645 | | tRNA epoxyqueuosine(34) reductase QueG | 0.29 | DDA3937_RS05105 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 74 |
| Vibrio cholerae E7946 ATCC 55056 | 0.43 | CSW01_01810 | | tRNA epoxyqueuosine(34) reductase QueG | 0.28 | CSW01_11520 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 62 |
| Dickeya dianthicola 67-19 | 0.42 | HGI48_RS18575 | | tRNA epoxyqueuosine(34) reductase QueG | 0.29 | HGI48_RS05105 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 71 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.42 | Xcc-8004.2252.1 | | Epoxyqueuosine (oQ) reductase QueG | 0.26 | Xcc-8004.3543.1 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | — | — |
| Dickeya dianthicola ME23 | 0.42 | DZA65_RS19710 | | tRNA epoxyqueuosine(34) reductase QueG | 0.29 | DZA65_RS05445 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.42 | HER17_RS02555 | | tRNA epoxyqueuosine(34) reductase QueG | 0.29 | HER17_RS16345 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 75 |
| Shewanella oneidensis MR-1 | 0.42 | SO3861 | | iron-sulfur cluster-binding protein (NCBI ptt file) | 0.28 | SO1626 | glnD | protein-P-II uridylyltransferase (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.41 | Shewana3_0745 | | putative iron-sulfur cluster binding protein (RefSeq) | 0.29 | Shewana3_2817 | | PII uridylyl-transferase (RefSeq) | low | > 73 |
| Pantoea sp. MT58 | 0.41 | IAI47_02560 | | tRNA epoxyqueuosine(34) reductase QueG | 0.29 | IAI47_15540 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 76 |
| Shewanella loihica PV-4 | 0.41 | Shew_2979 | | putative iron-sulfur cluster binding protein (RefSeq) | 0.29 | Shew_2637 | | PII uridylyl-transferase (RefSeq) | low | > 60 |
| Rahnella sp. WP5 | 0.41 | EX31_RS08850 | | tRNA epoxyqueuosine(34) reductase QueG | 0.28 | EX31_RS13045 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 89 |
| Shewanella amazonensis SB2B | 0.39 | Sama_2625 | | iron-sulfur cluster-binding protein (RefSeq) | 0.29 | Sama_1137 | | PII uridylyl-transferase (RefSeq) | low | > 62 |
| Acinetobacter radioresistens SK82 | 0.37 | MPMX26_01783 | | Epoxyqueuosine reductase | 0.29 | MPMX26_01867 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | low | > 36 |
| Kangiella aquimarina DSM 16071 | 0.35 | B158DRAFT_0486 | | iron-sulfur cluster binding protein, putative | 0.30 | B158DRAFT_1072 | | UTP--GlnB (protein PII) uridylyltransferase, GlnD | low | > 40 |
| Rhizobium sp. OAE497 | 0.29 | ABIE40_RS01310 | | tRNA epoxyqueuosine(34) reductase QueG | 0.23 | ABIE40_RS01765 | | [protein-PII] uridylyltransferase | low | > 107 |
| Rhodospirillum rubrum S1H | 0.28 | Rru_A0279 | | 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) | 0.22 | Rru_A3539 | | GlnB (protein PII) uridylyltransferase, GlnD (NCBI) | low | > 58 |
| Rhodopseudomonas palustris CGA009 | 0.28 | TX73_000215 | | tRNA epoxyqueuosine(34) reductase QueG | 0.23 | TX73_003060 | | [protein-PII] uridylyltransferase | low | > 86 |
| Sinorhizobium meliloti 1021 | 0.27 | SMc00406 | | 4Fe-4S ferredoxin | 0.23 | SMc01124 | | PII uridylyl-transferase | low | > 103 |
| Dinoroseobacter shibae DFL-12 | 0.27 | Dshi_3307 | | domain of unknown function DUF1730 (RefSeq) | 0.21 | Dshi_2833 | | UTP-GlnB uridylyltransferase, GlnD (RefSeq) | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.27 | A4249_RS11375 | | tRNA epoxyqueuosine(34) reductase QueG | 0.22 | A4249_RS13590 | | [protein-PII] uridylyltransferase | 0.76 | 46 |
| Caulobacter crescentus NA1000 | 0.27 | CCNA_03753 | | iron-sulfur cluster-binding protein | 0.24 | CCNA_00013 | | protein-PII uridylyltransferase | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.27 | CCNA_03753 | | iron-sulfur cluster-binding protein | 0.24 | CCNA_00013 | | protein-PII uridylyltransferase | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.26 | Ga0059261_1058 | | epoxyqueuosine reductase | 0.24 | Ga0059261_2737 | | UTP--GlnB (protein PII) uridylyltransferase, GlnD | low | > 68 |
| Magnetospirillum magneticum AMB-1 | 0.25 | AMB_RS03995 | | tRNA epoxyqueuosine(34) reductase QueG | 0.25 | AMB_RS22650 | | [protein-PII] uridylyltransferase | — | — |
Not shown: 1 genomes with orthologs for QEN71_RS02745 only; 9 genomes with orthologs for QEN71_RS06410 only