Conservation of cofitness between Psyr_4197 and Psyr_1614 in Pseudomonas syringae pv. syringae B728a

79 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4197 DNA replication and repair protein RecN 1.0 Psyr_1614 lipid A biosynthesis acyltransferase 0.40 12
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4197 DNA replication and repair protein RecN 1.00 Psyr_1614 lipid A biosynthesis acyltransferase low > 86
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_1178 DNA repair protein RecN 0.82 Pf1N1B4_3757 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) — —
Pseudomonas fluorescens GW456-L13 0.89 PfGW456L13_5106 DNA repair protein RecN 0.83 PfGW456L13_4190 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) — —
Pseudomonas fluorescens FW300-N2E2 0.88 Pf6N2E2_3370 DNA repair protein RecN 0.83 Pf6N2E2_5798 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) — —
Pseudomonas fluorescens FW300-N2E3 0.88 AO353_05660 DNA repair protein RecN 0.78 AO353_02365 lipid A biosynthesis lauroyl acyltransferase — —
Pseudomonas fluorescens SBW25 0.88 PFLU_RS25910 DNA repair protein RecN 0.82 PFLU_RS21425 lipid A biosynthesis lauroyl acyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS25910 DNA repair protein RecN 0.82 PFLU_RS21425 lipid A biosynthesis lauroyl acyltransferase low > 109
Pseudomonas simiae WCS417 0.88 PS417_24070 recombination and repair protein 0.81 PS417_19455 lipid A biosynthesis lauroyl acyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_07510 DNA repair protein RecN 0.83 AO356_19425 lipid A biosynthesis lauroyl acyltransferase low > 104
Pseudomonas sp. RS175 0.85 PFR28_00071 DNA repair protein RecN 0.81 PFR28_03150 Lipid A biosynthesis lauroyltransferase — —
Pseudomonas sp. S08-1 0.81 OH686_17050 DNA repair protein RecN 0.79 OH686_19780 Lipid A biosynthesis lauroyl acyltransferase — —
Pseudomonas putida KT2440 0.80 PP_4729 factor used in recombination and DNA repair 0.77 PP_1735 Lipid A biosynthesis lauroyl acyltransferase — —
Pseudomonas stutzeri RCH2 0.77 Psest_0962 DNA repair protein RecN 0.72 Psest_2944 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase low > 67
Marinobacter adhaerens HP15 0.50 HP15_3084 DNA repair protein RecN 0.39 HP15_449 lipid A biosynthesis lauroyl acyltransferase — —
Shewanella amazonensis SB2B 0.44 Sama_1026 recombination and repair protein (RefSeq) 0.41 Sama_0730 lipid A biosynthesis lauroyl acyltransferase (RefSeq) — —
Shewanella oneidensis MR-1 0.43 SO3462 recN DNA repair protein RecN (NCBI ptt file) 0.39 SO3746 htrB lipid A biosynthesis lauroyl acyltransferase (NCBI ptt file) — —
Serratia liquefaciens MT49 0.43 IAI46_19635 DNA repair protein RecN 0.42 IAI46_09675 LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee — —
Shewanella sp. ANA-3 0.43 Shewana3_1104 recombination and repair protein (RefSeq) 0.36 Shewana3_0848 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.43 CSW01_04395 DNA repair protein RecN 0.31 CSW01_01130 lipid A biosynthesis lauroyl acyltransferase — —
Shewanella loihica PV-4 0.43 Shew_1196 recombination and repair protein (RefSeq) 0.41 Shew_0658 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase (RefSeq) — —
Dickeya dadantii 3937 0.42 DDA3937_RS04325 DNA repair protein RecN 0.41 DDA3937_RS03455 kdo(2)-lipid IV(A) palmitoleoyltransferase low > 74
Pantoea sp. MT58 0.41 IAI47_04810 DNA repair protein RecN 0.42 IAI47_00555 kdo(2)-lipid IV(A) palmitoleoyltransferase 0.37 31
Rahnella sp. WP5 0.41 EX31_RS21760 DNA repair protein RecN 0.44 EX31_RS24325 LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee low > 89
Klebsiella michiganensis M5al 0.41 BWI76_RS21560 DNA repair protein RecN 0.46 BWI76_RS10960 lipid A biosynthesis lauroyl acyltransferase — —
Dickeya dianthicola ME23 0.41 DZA65_RS04235 DNA repair protein RecN 0.45 DZA65_RS13745 LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee low > 75
Dickeya dianthicola 67-19 0.40 HGI48_RS04320 DNA repair protein RecN 0.44 HGI48_RS13270 LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee low > 71
Escherichia coli ECRC99 0.40 KEDOAH_07075 recN DNA repair protein RecN 0.46 KEDOAH_23985 lpxL kdo(2)-lipid IV(A) lauroyltransferase — —
Escherichia coli ECRC101 0.40 MCAODC_11670 recN DNA repair protein RecN 0.46 MCAODC_23130 lpxL kdo(2)-lipid IV(A) lauroyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF4162 DNA repair protein RecN 0.46 GFF3333 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) — —
Pectobacterium carotovorum WPP14 0.40 HER17_RS17420 DNA repair protein RecN 0.43 HER17_RS08560 LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee — —
Escherichia coli ECRC102 0.40 NIAGMN_18915 recN DNA repair protein RecN 0.46 NIAGMN_24060 lpxL kdo(2)-lipid IV(A) lauroyltransferase — —
Escherichia coli ECRC100 0.40 OKFHMN_21145 recN DNA repair protein RecN 0.46 OKFHMN_03770 lpxL kdo(2)-lipid IV(A) lauroyltransferase — —
Escherichia coli BL21 0.40 ECD_02504 recombination and repair protein 0.46 ECD_01050 lauryl-acyl carrier protein (ACP)-dependent acyltransferase — —
Escherichia coli ECOR27 0.40 NOLOHH_12815 recN DNA repair protein RecN 0.46 NOLOHH_21300 lpxL kdo(2)-lipid IV(A) lauroyltransferase — —
Alteromonas macleodii MIT1002 0.40 MIT1002_01443 Recombination protein N 0.37 MIT1002_02881 Lipid A biosynthesis lauroyl acyltransferase — —
Escherichia coli ECRC98 0.40 JDDGAC_24810 recN DNA repair protein RecN 0.46 JDDGAC_07430 lpxL kdo(2)-lipid IV(A) lauroyltransferase — —
Escherichia coli BW25113 0.40 b2616 recN recombination and repair protein (NCBI) 0.46 b1054 lpxL lipid A biosynthesis lauroyl acyltransferase (NCBI) — —
Escherichia fergusonii Becca 0.40 EFB2_01277 DNA repair protein RecN 0.46 EFB2_02920 Lipid A biosynthesis lauroyltransferase — —
Escherichia coli ECRC62 0.40 BNILDI_11620 recN DNA repair protein RecN 0.46 BNILDI_19460 lpxL kdo(2)-lipid IV(A) lauroyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_01091 DNA repair protein RecN 0.46 OHPLBJKB_02611 Lipid A biosynthesis lauroyltransferase — —
Escherichia coli ECOR38 0.40 HEPCGN_20265 recN DNA repair protein RecN 0.46 HEPCGN_23720 lpxL kdo(2)-lipid IV(A) lauroyltransferase — —
Escherichia coli Nissle 1917 0.40 ECOLIN_RS14775 DNA repair protein RecN 0.46 ECOLIN_RS06120 kdo(2)-lipid IV(A) lauroyltransferase — —
Enterobacter asburiae PDN3 0.39 EX28DRAFT_2719 DNA repair protein RecN 0.44 EX28DRAFT_1877 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 0.52 17
Enterobacter sp. TBS_079 0.39 MPMX20_03486 DNA repair protein RecN 0.44 MPMX20_01734 Lipid A biosynthesis lauroyltransferase low > 85
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.3431.1 DNA repair protein RecN 0.37 Xcc-8004.1040.1 hypothetical protein — —
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_07340 recN DNA repair protein RecN 0.43 OKGIIK_16940 lpxP Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis) — —
Erwinia tracheiphila SCR3 0.38 LU632_RS16985 recN DNA repair protein RecN 0.40 LU632_RS10295 LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee low > 74
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS03060 DNA repair protein 0.26 HSERO_RS21450 lipid A biosynthesis acyltransferase low > 78
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS05665 DNA repair protein RecN 0.42 ABZR86_RS17200 LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.37 LRK54_RS17960 DNA repair protein RecN 0.43 LRK54_RS06695 LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase — —
Rhodanobacter denitrificans MT42 0.37 LRK55_RS17815 DNA repair protein RecN 0.43 LRK55_RS06440 LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase — —
Lysobacter sp. OAE881 0.37 ABIE51_RS11655 DNA repair protein RecN 0.40 ABIE51_RS17630 LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase low > 62
Dechlorosoma suillum PS 0.35 Dsui_3072 DNA repair protein RecN 0.32 Dsui_0647 Lauroyl/myristoyl acyltransferase — —
Ralstonia solanacearum PSI07 0.35 RPSI07_RS11890 DNA repair protein RecN 0.28 RPSI07_RS23310 lauroyl acyltransferase low > 81
Ralstonia solanacearum GMI1000 0.35 RS_RS13275 DNA repair protein RecN 0.27 RS_RS00670 lauroyl acyltransferase — —
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS05415 DNA repair protein RecN 0.28 RALBFv3_RS10060 lauroyl acyltransferase — —
Ralstonia solanacearum UW163 0.35 UW163_RS08210 DNA repair protein RecN 0.28 UW163_RS03520 lauroyl acyltransferase — —
Acidovorax sp. GW101-3H11 0.35 Ac3H11_3460 DNA repair protein RecN 0.24 Ac3H11_2970 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) low > 79
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS01065 DNA repair protein RecN 0.26 ABZR87_RS05575 lipid A biosynthesis lauroyl acyltransferase — —
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS26535 DNA repair protein RecN 0.29 QEN71_RS00370 lipid A biosynthesis lauroyl acyltransferase — —
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS05910 DNA repair protein 0.30 RR42_RS03620 lipid A biosynthesis lauroyl acyltransferase low > 128
Castellaniella sp019104865 MT123 0.33 ABCV34_RS07470 DNA repair protein RecN 0.28 ABCV34_RS13470 lysophospholipid acyltransferase family protein — —
Variovorax sp. SCN45 0.33 GFF2357 DNA repair protein RecN 0.28 GFF5307 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241) low > 127
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_04692 DNA replication and repair protein RecN 0.31 H281DRAFT_05195 KDO2-lipid IV(A) lauroyltransferase low > 103
Paraburkholderia graminis OAS925 0.32 ABIE53_000856 DNA repair protein RecN (Recombination protein N) 0.30 ABIE53_001464 KDO2-lipid IV(A) lauroyltransferase low > 113
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF829 DNA repair protein RecN 0.22 GFF1354 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) low > 90
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS03560 DNA repair protein 0.31 BPHYT_RS11385 lipid A biosynthesis lauroyl acyltransferase low > 109
Acinetobacter radioresistens SK82 0.31 MPMX26_00239 DNA repair protein RecN 0.35 MPMX26_00359 Lipid A biosynthesis lauroyltransferase low > 36
Bacteroides thetaiotaomicron VPI-5482 0.29 BT1361 DNA repair protein recN (Recombination protein N) (NCBI ptt file) 0.10 BT2152 putative acetyltransferase (NCBI ptt file) — —
Bacteroides stercoris CC31F 0.29 HMPREF1181_RS10900 DNA repair protein RecN 0.09 HMPREF1181_RS08705 lysophospholipid acyltransferase family protein — —
Magnetospirillum magneticum AMB-1 0.29 AMB_RS19520 DNA repair protein RecN 0.13 AMB_RS20705 lauroyl acyltransferase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.27 Echvi_2067 DNA repair protein RecN 0.09 Echvi_0288 Lauroyl/myristoyl acyltransferase low > 79
Pontibacter actiniarum KMM 6156, DSM 19842 0.27 CA264_13235 DNA repair protein RecN 0.10 CA264_02110 lauroyl acyltransferase — —
Pedobacter sp. GW460-11-11-14-LB5 0.26 CA265_RS14855 DNA repair protein RecN 0.11 CA265_RS23760 lauroyl acyltransferase low > 88
Dinoroseobacter shibae DFL-12 0.25 Dshi_2413 DNA repair protein RecN (RefSeq) 0.09 Dshi_0079 lipid A biosynthesis acyltransferase (RefSeq) — —
Caulobacter crescentus NA1000 0.23 CCNA_02062 DNA repair protein recN 0.13 CCNA_02333 lipid A biosynthesis lauroyl acyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.23 CCNA_02062 DNA repair protein recN 0.13 CCNA_02333 lipid A biosynthesis lauroyl acyltransferase low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.22 A4249_RS02620 DNA repair protein RecN 0.12 A4249_RS02240 lipid A biosynthesis acyltransferase — —
Desulfovibrio vulgaris Miyazaki F 0.17 DvMF_0923 SMC domain protein (RefSeq) 0.12 DvMF_0365 lipid A biosynthesis acyltransferase (RefSeq) — —

Not shown: 20 genomes with orthologs for Psyr_4197 only; 1 genomes with orthologs for Psyr_1614 only