| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens FW300-N2E2 | 1.0 | Pf6N2E2_2583 | | Flagellar motor switch protein FliM | 1.0 | Pf6N2E2_2573 | | RNA polymerase sigma factor for flagellar operon | 0.91 | 17 |
| Pseudomonas fluorescens FW300-N2C3 | 1.00 | AO356_03785 | | flagellar motor switch protein FliM | 1.00 | AO356_03730 | | flagellar biosynthesis sigma factor | 0.96 | 9 |
| Pseudomonas fluorescens FW300-N1B4 | 0.99 | Pf1N1B4_3615 | | Flagellar motor switch protein FliM | 0.97 | Pf1N1B4_3626 | | RNA polymerase sigma factor for flagellar operon | low | > 87 |
| Pseudomonas sp. DMC3 | 0.99 | GFF2460 | | Flagellar motor switch protein FliM | 0.97 | GFF2472 | | RNA polymerase sigma factor FliA | 0.81 | 8 |
| Pseudomonas sp. RS175 | 0.99 | PFR28_00842 | | Flagellar motor switch protein FliM | 0.99 | PFR28_00852 | | RNA polymerase sigma factor FliA | 0.95 | 9 |
| Pseudomonas fluorescens GW456-L13 | 0.99 | PfGW456L13_4342 | | Flagellar motor switch protein FliM | 0.96 | PfGW456L13_4331 | | RNA polymerase sigma factor for flagellar operon | 0.26 | 40 |
| Pseudomonas fluorescens FW300-N2E3 | 0.99 | AO353_18730 | | flagellar motor switch protein FliM | 0.97 | AO353_18785 | | flagellar biosynthesis sigma factor | 0.81 | 4 |
| Pseudomonas simiae WCS417 | 0.97 | PS417_19755 | | flagellar motor switch protein FliM | 0.95 | PS417_19695 | | flagellar biosynthesis sigma factor | 0.87 | 11 |
| Pseudomonas fluorescens SBW25 | 0.97 | PFLU_RS21725 | | flagellar motor switch protein FliM | 0.96 | PFLU_RS21660 | | RNA polymerase sigma factor FliA | 0.78 | 19 |
| Pseudomonas lactucae CFBP13502 | 0.97 | GEMAOFIL_04149 | | Flagellar motor switch protein FliM | 0.95 | GEMAOFIL_04138 | | RNA polymerase sigma factor FliA | low | > 96 |
| Pseudomonas fluorescens SBW25-INTG | 0.97 | PFLU_RS21725 | | flagellar motor switch protein FliM | 0.96 | PFLU_RS21660 | | RNA polymerase sigma factor FliA | 0.89 | 14 |
| Pseudomonas sp. SVBP6 | 0.95 | COO64_RS21230 | fliM | flagellar motor switch protein FliM | 0.95 | COO64_RS25625 | fliA | RNA polymerase sigma factor FliA | 0.92 | 18 |
| Pseudomonas putida KT2440 | 0.94 | PP_4358 | | flagellar synthesis, switching and energizing component | 0.91 | PP_4341 | | RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons | 0.83 | 12 |
| Pseudomonas sp. BP01 | 0.94 | JOY50_RS00635 | fliM | flagellar motor switch protein FliM | 0.92 | JOY50_RS00585 | fliA | RNA polymerase sigma factor FliA | 0.82 | 12 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.93 | Psyr_3447 | | Flagellar motor switch protein FliM | 0.94 | Psyr_3437 | | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.93 | Psyr_3447 | | Flagellar motor switch protein FliM | 0.94 | Psyr_3437 | | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG | 0.87 | 3 |
| Pseudomonas aeruginosa PA14 | 0.90 | IKLFDK_06860 | | flagellar motor switch protein FliM | 0.80 | IKLFDK_06920 | | flagellar biosynthesis sigma factor FliA | 0.76 | 13 |
| Pseudomonas aeruginosa PUPa3 | 0.90 | DQ20_RS47095 | fliM;go_component=bacterial-type | flagellar motor switch protein FliM | 0.81 | DQ20_RS47155 | fliA;inference=COORDINATES | RNA polymerase sigma factor FliA | 0.76 | 14 |
| Pseudomonas aeruginosa MRSN321 | 0.90 | DY961_RS05695 | fliM;go_component=bacterial-type | flagellar motor switch protein FliM | 0.81 | DY961_RS05635 | fliA;inference=COORDINATES | RNA polymerase sigma factor FliA | 0.49 | 33 |
| Pseudomonas sp. S08-1 | 0.90 | OH686_02785 | | flagellar motor switch protein FliM | 0.84 | OH686_02730 | | RNA polymerase sigma factor for flagellar operon | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.89 | Psest_1729 | | flagellar motor switch protein FliM | 0.83 | Psest_1740 | | RNA polymerase sigma factor, FliA/WhiG family | 0.93 | 4 |
| Pseudomonas segetis P6 | 0.88 | ACVTMO_RS15540 | fliM | flagellar motor switch protein FliM | 0.83 | ACVTMO_RS15490 | fliA | RNA polymerase sigma factor FliA | 0.90 | 19 |
| Marinobacter adhaerens HP15 | 0.72 | HP15_2315 | | flagellar motor switch protein FliM-like protein | 0.58 | HP15_2302 | | flagellar biosynthesis sigma factor FliA | low | > 73 |
| Shewanella loihica PV-4 | 0.65 | Shew_1373 | fliM | flagellar motor switch protein FliM (RefSeq) | 0.52 | Shew_1383 | fliA | flagellar biosynthesis sigma factor (RefSeq) | 0.91 | 7 |
| Shewanella oneidensis MR-1 | 0.64 | SO3221 | fliM | flagellar motor switch protein FliM (NCBI ptt file) | 0.52 | SO3210 | fliA | RNA polymerase sigma-27 factor (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.64 | Sama_2290 | fliM | flagellar motor switch protein FliM (RefSeq) | 0.53 | Sama_2280 | fliA | flagellar biosynthesis sigma factor (RefSeq) | 0.90 | 29 |
| Shewanella sp. ANA-3 | 0.64 | Shewana3_1349 | fliM | flagellar motor switch protein FliM (RefSeq) | 0.52 | Shewana3_1359 | fliA | flagellar biosynthesis sigma factor (RefSeq) | 0.87 | 22 |
| Alteromonas macleodii MIT1002 | 0.63 | MIT1002_01092 | | Flagellar motor switch protein FliM | 0.55 | MIT1002_01103 | | Sigma-F factor | low | > 70 |
| Vibrio cholerae E7946 ATCC 55056 | 0.61 | CSW01_10610 | | flagellar motor switch protein FliM | 0.51 | CSW01_10335 | | RNA polymerase sigma factor FliA | 0.74 | 57 |
| Lysobacter sp. OAE881 | 0.60 | ABIE51_RS16815 | | flagellar motor switch protein FliM | 0.49 | ABIE51_RS16865 | | RNA polymerase sigma factor FliA | 0.71 | 13 |
| Dyella japonica UNC79MFTsu3.2 | 0.56 | ABZR86_RS20215 | | flagellar motor switch protein FliM | 0.48 | ABZR86_RS20265 | | RNA polymerase sigma factor FliA | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.56 | LRK54_RS13530 | | flagellar motor switch protein FliM | 0.51 | LRK54_RS13580 | | RNA polymerase sigma factor FliA | 0.56 | 12 |
| Rhodanobacter denitrificans MT42 | 0.56 | LRK55_RS13270 | | flagellar motor switch protein FliM | 0.51 | LRK55_RS13320 | | RNA polymerase sigma factor FliA | 0.86 | 6 |
| Rhodanobacter sp000427505 FW510-R12 | 0.56 | LRK53_RS15045 | | flagellar motor switch protein FliM | 0.51 | LRK53_RS14995 | | RNA polymerase sigma factor FliA | low | > 59 |
| Rhodanobacter sp. FW510-T8 | 0.54 | OKGIIK_02780 | fliM | flagellar motor switch protein FliM | 0.51 | OKGIIK_02830 | fliA | RNA polymerase sigma factor FliA | 0.66 | 2 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.52 | Xcc-8004.2816.1 | | Flagellar motor switch protein FliM | 0.44 | Xcc-8004.2832.1 | | RNA polymerase sigma factor for flagellar operon | low | > 74 |
| Dechlorosoma suillum PS | 0.48 | Dsui_1749 | | flagellar motor switch protein FliM | 0.47 | Dsui_1726 | | RNA polymerase sigma factor, FliA/WhiG family | 0.79 | 13 |
| Ralstonia sp. UNC404CL21Col | 0.47 | ABZR87_RS22195 | | flagellar motor switch protein FliM | 0.41 | ABZR87_RS18040 | | RNA polymerase sigma factor FliA | 0.95 | 18 |
| Ralstonia solanacearum UW163 | 0.46 | UW163_RS17535 | | flagellar motor switch protein FliM | 0.41 | UW163_RS21665 | | RNA polymerase sigma factor FliA | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.46 | RALBFv3_RS21650 | | flagellar motor switch protein FliM | 0.41 | RALBFv3_RS17485 | | RNA polymerase sigma factor FliA | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.46 | RPSI07_RS01475 | | flagellar motor switch protein FliM | 0.41 | RPSI07_RS06165 | | RNA polymerase sigma factor FliA | low | > 81 |
| Herbaspirillum seropedicae SmR1 | 0.46 | HSERO_RS10275 | | flagellar motor switch protein FliM | 0.45 | HSERO_RS10160 | | flagellar biosynthesis sigma factor | 0.89 | 33 |
| Ralstonia solanacearum GMI1000 | 0.45 | RS_RS18975 | | flagellar motor switch protein FliM | 0.41 | RS_RS23830 | | RNA polymerase sigma factor FliA | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.45 | RR42_RS23375 | | flagellar motor switch protein FliM | 0.41 | RR42_RS35750 | | DNA-directed RNA polymerase sigma-70 factor | low | > 128 |
| Paraburkholderia sabiae LMG 24235 | 0.45 | QEN71_RS28830 | | flagellar motor switch protein FliM | 0.45 | QEN71_RS28940 | | RNA polymerase sigma factor FliA | low | > 153 |
| Paraburkholderia graminis OAS925 | 0.45 | ABIE53_000081 | | flagellar motor switch protein FliM | 0.45 | ABIE53_000108 | | RNA polymerase sigma factor for flagellar operon FliA | 0.93 | 22 |
| Burkholderia phytofirmans PsJN | 0.45 | BPHYT_RS18810 | | flagellar motor switch protein FliM | 0.45 | BPHYT_RS18925 | | RNA polymerase sigma70 | 0.92 | 14 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.45 | H281DRAFT_05779 | | flagellar motor switch protein FliM | 0.45 | H281DRAFT_05756 | | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG | 0.73 | 18 |
| Methylophilus sp. DMC18 | 0.43 | GFF547 | | Flagellar motor switch protein FliM | 0.42 | GFF1338 | | RNA polymerase sigma factor FliA | low | > 43 |
| Acidovorax sp. GW101-3H11 | 0.42 | Ac3H11_1411 | | Flagellar motor switch protein FliM | 0.41 | Ac3H11_1381 | | RNA polymerase sigma factor for flagellar operon | low | > 79 |
| Variovorax sp. SCN45 | 0.42 | GFF5743 | | Flagellar motor switch protein FliM | 0.38 | GFF5774 | | RNA polymerase sigma factor for flagellar operon | low | > 127 |
| Castellaniella sp019104865 MT123 | 0.41 | ABCV34_RS05680 | | flagellar motor switch protein FliM | 0.36 | ABCV34_RS05605 | | RNA polymerase sigma factor FliA | low | > 48 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.40 | GFF1458 | | Flagellar motor switch protein FliM | 0.39 | GFF1428 | | RNA polymerase sigma factor for flagellar operon | 0.39 | 28 |
| Dickeya dadantii 3937 | 0.40 | DDA3937_RS13400 | | flagellar motor switch protein FliM | 0.43 | DDA3937_RS13300 | | RNA polymerase sigma factor FliA | 0.98 | 19 |
| Pectobacterium carotovorum WPP14 | 0.40 | HER17_RS08245 | | flagellar motor switch protein FliM | 0.41 | HER17_RS08355 | | RNA polymerase sigma factor FliA | 0.88 | 19 |
| Dickeya dianthicola ME23 | 0.39 | DZA65_RS13930 | | flagellar motor switch protein FliM | 0.43 | DZA65_RS13835 | | RNA polymerase sigma factor FliA | 0.98 | 23 |
| Dickeya dianthicola 67-19 | 0.39 | HGI48_RS13445 | | flagellar motor switch protein FliM | 0.43 | HGI48_RS13350 | | RNA polymerase sigma factor FliA | 0.84 | 28 |
| Serratia liquefaciens MT49 | 0.39 | IAI46_15875 | | flagellar motor switch protein FliM | 0.41 | IAI46_15785 | | RNA polymerase sigma factor FliA | low | > 87 |
| Pantoea agglomerans CFBP13505 P0401 | 0.39 | PagCFBP13505_RS01905 | | flagellar motor switch protein FliM | 0.42 | PagCFBP13505_RS02055 | | RNA polymerase sigma factor FliA | 0.90 | 31 |
| Pantoea sp. MT58 | 0.39 | IAI47_07995 | | flagellar motor switch protein FliM | 0.42 | IAI47_08160 | | RNA polymerase sigma factor FliA | 0.87 | 26 |
| Erwinia amylovora T8 | 0.38 | OLJFJH_15390 | | flagellar motor switch protein FliM | 0.43 | OLJFJH_12555 | | RNA polymerase sigma factor FliA | low | > 58 |
| Erwinia tracheiphila SCR3 | 0.38 | LU632_RS10540 | fliM | flagellar motor switch protein FliM | 0.43 | LU632_RS13785 | | RNA polymerase sigma factor FliA | low | > 73 |
| Erwinia tracheiphila HP pepo 2.2 | 0.38 | IJEDHG_21200 | fliM | flagellar motor switch protein FliM | 0.44 | IJEDHG_21960 | fliA | RNA polymerase sigma factor FliA | low | > 61 |
| Escherichia coli ECRC62 | 0.38 | BNILDI_15100 | fliM | flagellar motor switch protein FliM | 0.42 | BNILDI_15190 | fliA | RNA polymerase sigma factor FliA | low | > 75 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.38 | GFF4011 | | Flagellar motor switch protein FliM | 0.42 | GFF1690 | | RNA polymerase sigma factor for flagellar operon | 0.79 | 24 |
| Enterobacter sp. TBS_079 | 0.38 | MPMX20_02942 | | Flagellar motor switch protein FliM | 0.41 | MPMX20_02847 | | RNA polymerase sigma factor FliA | 0.86 | 11 |
| Escherichia coli ECRC99 | 0.38 | KEDOAH_02415 | fliM | flagellar motor switch protein FliM | 0.42 | KEDOAH_02310 | fliA | RNA polymerase sigma factor FliA | — | — |
| Escherichia coli ECRC101 | 0.38 | MCAODC_19715 | fliM | flagellar motor switch protein FliM | 0.42 | MCAODC_19610 | fliA | RNA polymerase sigma factor FliA | 0.26 | 40 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.38 | OHPLBJKB_01784 | | Flagellar motor switch protein FliM | 0.42 | OHPLBJKB_01807 | | RNA polymerase sigma factor FliA | low | > 74 |
| Escherichia coli ECRC98 | 0.38 | JDDGAC_00265 | fliM | flagellar motor switch protein FliM | 0.42 | JDDGAC_00370 | fliA | RNA polymerase sigma factor FliA | low | > 87 |
| Escherichia coli ECRC100 | 0.38 | OKFHMN_25680 | fliM | flagellar motor switch protein FliM | 0.42 | OKFHMN_25780 | fliA | RNA polymerase sigma factor FliA | 0.68 | 19 |
| Escherichia coli BW25113 | 0.38 | b1945 | fliM | flagellar motor switch protein M (NCBI) | 0.42 | b1922 | fliA | flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons (VIMSS) | 0.41 | 33 |
| Escherichia coli ECRC102 | 0.38 | NIAGMN_02375 | fliM | flagellar motor switch protein FliM | 0.42 | NIAGMN_02270 | fliA | RNA polymerase sigma factor FliA | — | — |
| Escherichia coli Nissle 1917 | 0.38 | ECOLIN_RS11095 | | flagellar motor switch protein FliM | 0.42 | ECOLIN_RS10975 | | RNA polymerase sigma factor FliA | 0.38 | 17 |
| Escherichia fergusonii Becca | 0.38 | EFB2_02001 | | Flagellar motor switch protein FliM | 0.42 | EFB2_02023 | | RNA polymerase sigma factor FliA | low | > 86 |
| Enterobacter asburiae PDN3 | 0.38 | EX28DRAFT_0609 | | flagellar motor switch protein FliM | 0.41 | EX28DRAFT_0625 | | RNA polymerase sigma factor, FliA/WhiG family | 0.78 | 18 |
| Escherichia coli ECOR38 | 0.38 | HEPCGN_04040 | fliM | flagellar motor switch protein FliM | 0.42 | HEPCGN_04135 | fliA | RNA polymerase sigma factor FliA | low | > 88 |
| Escherichia coli ECOR27 | 0.38 | NOLOHH_16310 | fliM | flagellar motor switch protein FliM | 0.42 | NOLOHH_16400 | fliA | RNA polymerase sigma factor FliA | 0.70 | 32 |
| Rahnella sp. WP5 | 0.38 | EX31_RS09575 | | flagellar motor switch protein FliM | 0.41 | EX31_RS09450 | | RNA polymerase sigma factor FliA | 0.67 | 9 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.37 | DVU0910 | fliM | flagellar motor switch protein FliM (TIGR) | 0.29 | DVU3229 | fliA | RNA polymerase sigma factor for flagellar operon FliA (TIGR) | 0.87 | 27 |
| Desulfovibrio vulgaris Miyazaki F | 0.36 | DvMF_1396 | | flagellar motor switch protein FliM (RefSeq) | 0.30 | DvMF_2011 | | RNA polymerase, sigma 28 subunit, FliA/WhiG (RefSeq) | 0.82 | 17 |
| Sphingomonas koreensis DSMZ 15582 | 0.21 | Ga0059261_1141 | | flagellar motor switch protein FliM | 0.25 | Ga0059261_2081 | | RNA polymerase sigma factor, FliA/WhiG family | 0.44 | 8 |
| Sphingobium sp. HT1-2 | 0.14 | GFF3735 | | Flagellar motor switch protein FliM | 0.28 | GFF3722 | | RNA polymerase sigma factor for flagellar operon | low | > 95 |
Not shown: 8 genomes with orthologs for Pf6N2E2_2583 only; 1 genomes with orthologs for Pf6N2E2_2573 only