Conservation of cofitness between PP_5128 and PP_4678 in Pseudomonas putida KT2440

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5128 Dihydroxy-acid dehydratase 1.0 PP_4678 Ketol-acid reductoisomerase 0.96 1
Pseudomonas fluorescens FW300-N2E3 0.97 AO353_08345 dihydroxy-acid dehydratase 0.95 AO353_14505 ketol-acid reductoisomerase 0.99 1
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_973 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.95 PfGW456L13_1540 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.89 9
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_13250 dihydroxy-acid dehydratase 0.95 AO356_16180 ketol-acid reductoisomerase 0.98 1
Pseudomonas simiae WCS417 0.96 PS417_26890 dihydroxy-acid dehydratase 0.94 PS417_23800 ketol-acid reductoisomerase 0.96 1
Pseudomonas sp. RS175 0.96 PFR28_04278 Dihydroxy-acid dehydratase 0.94 PFR28_03697 Ketol-acid reductoisomerase (NADP(+)) 0.93 1
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_4564 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.94 Pf6N2E2_5177 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.97 1
Pseudomonas fluorescens SBW25-INTG 0.96 PFLU_RS28535 dihydroxy-acid dehydratase 0.94 PFLU_RS25640 ketol-acid reductoisomerase 0.97 1
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_2303 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.95 Pf1N1B4_2880 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.98 1
Pseudomonas fluorescens SBW25 0.96 PFLU_RS28535 dihydroxy-acid dehydratase 0.94 PFLU_RS25640 ketol-acid reductoisomerase 0.93 1
Pseudomonas syringae pv. syringae B728a 0.94 Psyr_0469 dihydroxyacid dehydratase 0.94 Psyr_0848 ketol-acid reductoisomerase 0.97 2
Pseudomonas syringae pv. syringae B728a ΔmexB 0.94 Psyr_0469 dihydroxyacid dehydratase 0.94 Psyr_0848 ketol-acid reductoisomerase 0.94 8
Pseudomonas stutzeri RCH2 0.94 Psest_0234 dihydroxy-acid dehydratase 0.92 Psest_1038 ketol-acid reductoisomerase — —
Pseudomonas sp. S08-1 0.93 OH686_14100 dihydroxy-acid dehydratase 0.96 OH686_08115 ketol-acid reductoisomerase 0.87 11
Xanthomonas campestris pv. campestris strain 8004 0.87 Xcc-8004.451.1 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.52 Xcc-8004.1060.1 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.94 1
Ralstonia sp. UNC404CL21Col 0.81 ABZR87_RS00240 dihydroxy-acid dehydratase 0.72 ABZR87_RS14945 ketol-acid reductoisomerase — —
Acidovorax sp. GW101-3H11 0.80 Ac3H11_955 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.76 Ac3H11_527 Ketol-acid reductoisomerase (EC 1.1.1.86) — —
Paraburkholderia graminis OAS925 0.80 ABIE53_006513 dihydroxy-acid dehydratase 0.69 ABIE53_001576 ketol-acid reductoisomerase — —
Paraburkholderia sabiae LMG 24235 0.80 QEN71_RS21095 dihydroxy-acid dehydratase 0.69 QEN71_RS24215 ketol-acid reductoisomerase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.80 H281DRAFT_05312 dihydroxyacid dehydratase 0.69 H281DRAFT_04553 ketol-acid reductoisomerase low > 103
Marinobacter adhaerens HP15 0.78 HP15_595 dihydroxy-acid dehydratase 0.83 HP15_533 ketol-acid reductoisomerase — —
Sinorhizobium meliloti 1021 0.77 SMc04045 dihydroxy-acid dehydratase 0.65 SMc04346 ketol-acid reductoisomerase 0.95 23
Agrobacterium fabrum C58 0.76 Atu1918 dihydroxy-acid dehydratase 0.62 Atu2019 ketol-acid reductoisomerase — —
Rhizobium sp. OAE497 0.76 ABIE40_RS08005 dihydroxy-acid dehydratase 0.63 ABIE40_RS11360 ketol-acid reductoisomerase — —
Azospirillum brasilense Sp245 0.75 AZOBR_RS15015 dihydroxy-acid dehydratase 0.66 AZOBR_RS06570 ketol-acid reductoisomerase — —
Dechlorosoma suillum PS 0.75 Dsui_1122 dihydroxy-acid dehydratase 0.78 Dsui_3527 ketol-acid reductoisomerase — —
Rhodopseudomonas palustris CGA009 0.74 TX73_007515 dihydroxy-acid dehydratase 0.66 TX73_010485 ketol-acid reductoisomerase — —
Synechococcus elongatus PCC 7942 0.74 Synpcc7942_0626 ilvD dihydroxy-acid dehydratase 0.61 Synpcc7942_1552 ilvC ketol-acid reductoisomerase — —
Azospirillum sp. SherDot2 0.73 MPMX19_05356 Dihydroxy-acid dehydratase 0.67 MPMX19_01774 Ketol-acid reductoisomerase (NADP(+)) — —
Phaeobacter inhibens DSM 17395 0.73 PGA1_c29490 dihydroxy-acid dehydratase LivD 0.63 PGA1_c06580 ketol-acid reductoisomerase IlvC — —
Herbaspirillum seropedicae SmR1 0.72 HSERO_RS02650 dihydroxy-acid dehydratase 0.74 HSERO_RS19010 ketol-acid reductoisomerase low > 78
Caulobacter crescentus NA1000 Δfur 0.72 CCNA_03139 dihydroxy-acid dehydratase 0.66 CCNA_02204 ketol-acid reductoisomerase/2-dehydropantoate 2-reductase — —
Caulobacter crescentus NA1000 0.72 CCNA_03139 dihydroxy-acid dehydratase 0.66 CCNA_02204 ketol-acid reductoisomerase/2-dehydropantoate 2-reductase — —
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS10100 dihydroxy-acid dehydratase 0.70 BPHYT_RS06555 ketol-acid reductoisomerase 0.81 12
Rhodospirillum rubrum S1H 0.70 Rru_A1786 Dihydroxy-acid dehydratase (NCBI) 0.67 Rru_A0469 Ketol-acid reductoisomerase (NCBI) 0.96 5
Magnetospirillum magneticum AMB-1 0.70 AMB_RS12770 dihydroxy-acid dehydratase 0.66 AMB_RS17750 ketol-acid reductoisomerase — —
Castellaniella sp019104865 MT123 0.70 ABCV34_RS14810 dihydroxy-acid dehydratase 0.73 ABCV34_RS01220 ketol-acid reductoisomerase low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.65 GFF2073 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.78 GFF4278 Ketol-acid reductoisomerase (EC 1.1.1.86) — —
Bifidobacterium breve UCC2003 0.56 BBR_RS17635 dihydroxy-acid dehydratase 0.51 BBR_RS10830 ketol-acid reductoisomerase 0.91 1
Desulfovibrio vulgaris Miyazaki F 0.37 DvMF_2034 dihydroxy-acid dehydratase (RefSeq) 0.58 DvMF_0155 ketol-acid reductoisomerase (RefSeq) 0.78 36
Desulfovibrio vulgaris Hildenborough JW710 0.37 DVU3373 ilvD dihydroxy-acid dehydratase (TIGR) 0.57 DVU1378 ilvC ketol-acid reductoisomerase (TIGR) 0.99 1
Methanococcus maripaludis JJ 0.33 MMJJ_RS03675 dihydroxy-acid dehydratase 0.50 MMJJ_RS01620 ketol-acid reductoisomerase — —
Methanococcus maripaludis S2 0.33 MMP_RS01700 dihydroxy-acid dehydratase 0.50 MMP_RS03435 ketol-acid reductoisomerase 0.62 10
Mycobacterium tuberculosis H37Rv 0.32 Rv0189c Probable dihydroxy-acid dehydratase IlvD (dad) 0.55 Rv3001c Probable KETOL-acid reductoisomerase IlvC (acetohydroxy-acid isomeroreductase) (alpha-keto-beta-hydroxylacil reductoisomerase) — —
Variovorax sp. OAS795 0.31 ABID97_RS17500 dihydroxy-acid dehydratase 0.73 ABID97_RS14895 ketol-acid reductoisomerase — —
Variovorax sp. SCN45 0.31 GFF471 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.73 GFF1161 Ketol-acid reductoisomerase (NADP(+)) (EC 1.1.1.86) — —
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS16210 dihydroxy-acid dehydratase 0.72 RR42_RS05445 ketol-acid reductoisomerase — —
Ralstonia solanacearum GMI1000 0.30 RS_RS12105 dihydroxy-acid dehydratase 0.71 RS_RS10410 ketol-acid reductoisomerase — —
Ralstonia solanacearum PSI07 0.30 RPSI07_RS12840 dihydroxy-acid dehydratase 0.71 RPSI07_RS14265 ketol-acid reductoisomerase — —
Ralstonia solanacearum UW163 0.29 UW163_RS09135 dihydroxy-acid dehydratase 0.71 UW163_RS10685 ketol-acid reductoisomerase — —
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS04535 dihydroxy-acid dehydratase 0.71 RALBFv3_RS03040 ketol-acid reductoisomerase — —
Dinoroseobacter shibae DFL-12 0.29 Dshi_0129 dihydroxy-acid dehydratase (RefSeq) 0.62 Dshi_2396 ketol-acid reductoisomerase (RefSeq) — —
Sphingomonas koreensis DSMZ 15582 0.28 Ga0059261_4216 Dihydroxyacid dehydratase/phosphogluconate dehydratase 0.65 Ga0059261_0066 ketol-acid reductoisomerase (EC 1.1.1.86) — —
Acinetobacter radioresistens SK82 0.28 MPMX26_03019 Dihydroxy-acid dehydratase 0.85 MPMX26_00474 Ketol-acid reductoisomerase (NADP(+)) 0.94 2
Echinicola vietnamensis KMM 6221, DSM 17526 0.28 Echvi_2055 dihydroxy-acid dehydratase 0.22 Echvi_2058 ketol-acid reductoisomerase 0.97 8
Lysobacter sp. OAE881 0.27 ABIE51_RS17540 dihydroxy-acid dehydratase 0.52 ABIE51_RS17545 ketol-acid reductoisomerase 0.99 1
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS15945 dihydroxy-acid dehydratase 0.52 ABZR86_RS15940 ketol-acid reductoisomerase 0.96 3
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_13600 ilvD dihydroxy-acid dehydratase 0.52 OKGIIK_13605 ilvC ketol-acid reductoisomerase low > 52
Mucilaginibacter yixingensis YX-36 DSM 26809 0.27 ABZR88_RS11575 dihydroxy-acid dehydratase 0.21 ABZR88_RS11590 ketol-acid reductoisomerase 0.89 1
Brevundimonas sp. GW460-12-10-14-LB2 0.25 A4249_RS10030 dihydroxy-acid dehydratase 0.48 A4249_RS10025 ketol-acid reductoisomerase 0.99 25
Rhodanobacter denitrificans MT42 0.25 LRK55_RS09960 dihydroxy-acid dehydratase 0.53 LRK55_RS09955 ketol-acid reductoisomerase low > 63
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS10320 dihydroxy-acid dehydratase 0.53 LRK54_RS10315 ketol-acid reductoisomerase 0.93 1

Not shown: 40 genomes with orthologs for PP_5128 only; 0 genomes with orthologs for PP_4678 only