Conservation of cofitness between PP_0293 and PP_4678 in Pseudomonas putida KT2440

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0293 Imidazole glycerol phosphate synthase subunit HisF 1.0 PP_4678 Ketol-acid reductoisomerase 0.83 5
Pseudomonas sp. RS175 0.98 PFR28_04933 Imidazole glycerol phosphate synthase subunit HisF 0.94 PFR28_03697 Ketol-acid reductoisomerase (NADP(+)) 0.57 6
Pseudomonas fluorescens FW300-N2C3 0.98 AO356_09795 imidazole glycerol phosphate synthase subunit HisF 0.95 AO356_16180 ketol-acid reductoisomerase 0.69 19
Pseudomonas fluorescens FW300-N2E2 0.98 Pf6N2E2_3838 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.94 Pf6N2E2_5177 Ketol-acid reductoisomerase (EC 1.1.1.86)
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_1623 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.95 Pf1N1B4_2880 Ketol-acid reductoisomerase (EC 1.1.1.86)
Pseudomonas fluorescens SBW25 0.98 PFLU_RS01625 imidazole glycerol phosphate synthase subunit HisF 0.94 PFLU_RS25640 ketol-acid reductoisomerase low > 109
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS01625 imidazole glycerol phosphate synthase subunit HisF 0.94 PFLU_RS25640 ketol-acid reductoisomerase 0.54 21
Pseudomonas simiae WCS417 0.97 PS417_01580 imidazole glycerol phosphate synthase 0.94 PS417_23800 ketol-acid reductoisomerase 0.78 9
Pseudomonas fluorescens FW300-N2E3 0.97 AO353_12090 imidazole glycerol phosphate synthase subunit HisF 0.95 AO353_14505 ketol-acid reductoisomerase 0.84 9
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_358 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.95 PfGW456L13_1540 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.90 10
Pseudomonas syringae pv. syringae B728a 0.97 Psyr_4893 imidazole glycerol phosphate synthase subunit hisF 0.94 Psyr_0848 ketol-acid reductoisomerase 0.81 8
Pseudomonas syringae pv. syringae B728a ΔmexB 0.97 Psyr_4893 imidazole glycerol phosphate synthase subunit hisF 0.94 Psyr_0848 ketol-acid reductoisomerase
Pseudomonas stutzeri RCH2 0.92 Psest_0156 imidazoleglycerol phosphate synthase, cyclase subunit 0.92 Psest_1038 ketol-acid reductoisomerase
Pseudomonas sp. S08-1 0.92 OH686_14595 Imidazole glycerol phosphate synthase cyclase subunit 0.96 OH686_08115 ketol-acid reductoisomerase 0.68 24
Marinobacter adhaerens HP15 0.82 HP15_3009 protein containing histidine biosynthesis, HisF domain 0.83 HP15_533 ketol-acid reductoisomerase
Paraburkholderia bryophila 376MFSha3.1 0.77 H281DRAFT_05659 imidazole glycerol phosphate synthase subunit hisF 0.69 H281DRAFT_04553 ketol-acid reductoisomerase
Paraburkholderia graminis OAS925 0.77 ABIE53_003695 cyclase 0.69 ABIE53_001576 ketol-acid reductoisomerase
Burkholderia phytofirmans PsJN 0.77 BPHYT_RS17680 imidazole glycerol phosphate synthase subunit HisF 0.70 BPHYT_RS06555 ketol-acid reductoisomerase 0.90 9
Paraburkholderia sabiae LMG 24235 0.76 QEN71_RS27835 imidazole glycerol phosphate synthase subunit HisF 0.69 QEN71_RS24215 ketol-acid reductoisomerase 0.93 17
Ralstonia solanacearum IBSBF1503 0.76 RALBFv3_RS06815 imidazole glycerol phosphate synthase subunit HisF 0.71 RALBFv3_RS03040 ketol-acid reductoisomerase
Ralstonia solanacearum UW163 0.76 UW163_RS06800 imidazole glycerol phosphate synthase subunit HisF 0.71 UW163_RS10685 ketol-acid reductoisomerase
Ralstonia solanacearum PSI07 0.76 RPSI07_RS10420 imidazole glycerol phosphate synthase subunit HisF 0.71 RPSI07_RS14265 ketol-acid reductoisomerase
Ralstonia solanacearum GMI1000 0.76 RS_RS14760 imidazole glycerol phosphate synthase subunit HisF 0.71 RS_RS10410 ketol-acid reductoisomerase
Ralstonia sp. UNC404CL21Col 0.75 ABZR87_RS02470 imidazole glycerol phosphate synthase subunit HisF 0.72 ABZR87_RS14945 ketol-acid reductoisomerase
Cupriavidus basilensis FW507-4G11 0.75 RR42_RS18885 imidazole glycerol phosphate synthase 0.72 RR42_RS05445 ketol-acid reductoisomerase
Acinetobacter radioresistens SK82 0.75 MPMX26_02854 Imidazole glycerol phosphate synthase subunit HisF 0.85 MPMX26_00474 Ketol-acid reductoisomerase (NADP(+)) 0.88 23
Castellaniella sp019104865 MT123 0.73 ABCV34_RS11250 imidazole glycerol phosphate synthase subunit HisF 0.73 ABCV34_RS01220 ketol-acid reductoisomerase low > 48
Dechlorosoma suillum PS 0.72 Dsui_1418 imidazoleglycerol phosphate synthase, cyclase subunit 0.78 Dsui_3527 ketol-acid reductoisomerase
Herbaspirillum seropedicae SmR1 0.72 HSERO_RS20315 imidazole glycerol phosphate synthase 0.74 HSERO_RS19010 ketol-acid reductoisomerase low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.69 GFF1309 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.78 GFF4278 Ketol-acid reductoisomerase (EC 1.1.1.86)
Azospirillum brasilense Sp245 0.69 AZOBR_RS01685 imidazole glycerol phosphate synthase 0.66 AZOBR_RS06570 ketol-acid reductoisomerase
Variovorax sp. OAS795 0.69 ABID97_RS23105 imidazole glycerol phosphate synthase subunit HisF 0.73 ABID97_RS14895 ketol-acid reductoisomerase
Variovorax sp. SCN45 0.68 GFF5357 Imidazole glycerol phosphate synthase cyclase subunit 0.73 GFF1161 Ketol-acid reductoisomerase (NADP(+)) (EC 1.1.1.86)
Azospirillum sp. SherDot2 0.68 MPMX19_02542 Imidazole glycerol phosphate synthase subunit HisF 0.67 MPMX19_01774 Ketol-acid reductoisomerase (NADP(+))
Sinorhizobium meliloti 1021 0.67 SMc02569 imidazole glycerol phosphate synthase subunit HisF 0.65 SMc04346 ketol-acid reductoisomerase 0.89 14
Magnetospirillum magneticum AMB-1 0.66 AMB_RS22925 imidazole glycerol phosphate synthase cyclase subunit 0.66 AMB_RS17750 ketol-acid reductoisomerase
Rhodospirillum rubrum S1H 0.65 Rru_A3594 Histidine biosynthesis protein HisF (NCBI) 0.67 Rru_A0469 Ketol-acid reductoisomerase (NCBI) 0.86 4
Agrobacterium fabrum C58 0.64 Atu0039 imidazoleglycerol-phosphate synthase cyclase 0.62 Atu2019 ketol-acid reductoisomerase
Dinoroseobacter shibae DFL-12 0.64 Dshi_2576 imidazoleglycerol phosphate synthase, cyclase subunit (RefSeq) 0.62 Dshi_2396 ketol-acid reductoisomerase (RefSeq)
Acidovorax sp. GW101-3H11 0.63 Ac3H11_4733 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.76 Ac3H11_527 Ketol-acid reductoisomerase (EC 1.1.1.86)
Rhizobium sp. OAE497 0.63 ABIE40_RS19440 imidazole glycerol phosphate synthase subunit HisF 0.63 ABIE40_RS11360 ketol-acid reductoisomerase
Rhodopseudomonas palustris CGA009 0.62 TX73_001625 imidazole glycerol phosphate synthase subunit HisF 0.66 TX73_010485 ketol-acid reductoisomerase
Phaeobacter inhibens DSM 17395 0.61 PGA1_c09240 imidazole glycerol phosphate synthase subunit HisF 0.63 PGA1_c06580 ketol-acid reductoisomerase IlvC
Sphingomonas koreensis DSMZ 15582 0.60 Ga0059261_1048 imidazoleglycerol phosphate synthase, cyclase subunit 0.65 Ga0059261_0066 ketol-acid reductoisomerase (EC 1.1.1.86)
Caulobacter crescentus NA1000 0.58 CCNA_03853 imidazole glycerol phosphate synthase, cyclase subunit 0.66 CCNA_02204 ketol-acid reductoisomerase/2-dehydropantoate 2-reductase
Caulobacter crescentus NA1000 Δfur 0.58 CCNA_03853 imidazole glycerol phosphate synthase, cyclase subunit 0.66 CCNA_02204 ketol-acid reductoisomerase/2-dehydropantoate 2-reductase
Methanococcus maripaludis JJ 0.57 MMJJ_RS05490 imidazole glycerol phosphate synthase subunit HisF 0.50 MMJJ_RS01620 ketol-acid reductoisomerase
Methanococcus maripaludis S2 0.56 MMP_RS08865 imidazole glycerol phosphate synthase subunit HisF 0.50 MMP_RS03435 ketol-acid reductoisomerase
Mycobacterium tuberculosis H37Rv 0.56 Rv1605 Probable cyclase HisF 0.55 Rv3001c Probable KETOL-acid reductoisomerase IlvC (acetohydroxy-acid isomeroreductase) (alpha-keto-beta-hydroxylacil reductoisomerase)
Desulfovibrio vulgaris Miyazaki F 0.55 DvMF_2304 imidazole glycerol phosphate synthase subunit HisF (RefSeq) 0.58 DvMF_0155 ketol-acid reductoisomerase (RefSeq) 0.76 40
Bifidobacterium breve UCC2003 0.55 BBR_RS16095 imidazole glycerol phosphate synthase subunit HisF 0.51 BBR_RS10830 ketol-acid reductoisomerase low > 34
Desulfovibrio vulgaris Hildenborough JW710 0.53 DVU0286 hisF imidazoleglycerol phosphate synthase, cyclase subunit (TIGR) 0.57 DVU1378 ilvC ketol-acid reductoisomerase (TIGR) 0.82 28
Synechococcus elongatus PCC 7942 0.53 Synpcc7942_2087 hisF imidazole glycerol phosphate synthase subunit HisF 0.61 Synpcc7942_1552 ilvC ketol-acid reductoisomerase
Echinicola vietnamensis KMM 6221, DSM 17526 0.52 Echvi_2516 imidazoleglycerol phosphate synthase, cyclase subunit 0.22 Echvi_2058 ketol-acid reductoisomerase 0.88 28
Mucilaginibacter yixingensis YX-36 DSM 26809 0.48 ABZR88_RS06855 imidazole glycerol phosphate synthase subunit HisF 0.21 ABZR88_RS11590 ketol-acid reductoisomerase 0.79 2
Lysobacter sp. OAE881 0.43 ABIE51_RS13300 imidazole glycerol phosphate synthase subunit HisF 0.52 ABIE51_RS17545 ketol-acid reductoisomerase 0.89 13
Xanthomonas campestris pv. campestris strain 8004 0.43 Xcc-8004.2943.1 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.52 Xcc-8004.1060.1 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.77 28
Brevundimonas sp. GW460-12-10-14-LB2 0.40 A4249_RS10715 imidazole glycerol phosphate synthase subunit HisF 0.48 A4249_RS10025 ketol-acid reductoisomerase 0.98 43
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS06705 imidazole glycerol phosphate synthase subunit HisF 0.52 ABZR86_RS15940 ketol-acid reductoisomerase 0.96 1
Rhodanobacter denitrificans FW104-10B01 0.39 LRK54_RS01580 imidazole glycerol phosphate synthase subunit HisF 0.53 LRK54_RS10315 ketol-acid reductoisomerase low > 59
Rhodanobacter denitrificans MT42 0.38 LRK55_RS01360 imidazole glycerol phosphate synthase subunit HisF 0.53 LRK55_RS09955 ketol-acid reductoisomerase low > 63
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_04975 hisF imidazole glycerol phosphate synthase subunit HisF 0.52 OKGIIK_13605 ilvC ketol-acid reductoisomerase low > 52

Not shown: 40 genomes with orthologs for PP_0293 only; 0 genomes with orthologs for PP_4678 only