Conservation of cofitness between PP_5128 and PP_1995 in Pseudomonas putida KT2440

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5128 Dihydroxy-acid dehydratase 1.0 PP_1995 N-(5'-phosphoribosyl)anthranilate isomerase 0.91 11
Pseudomonas fluorescens FW300-N2E3 0.97 AO353_08345 dihydroxy-acid dehydratase 0.83 AO353_20665 N-(5'-phosphoribosyl)anthranilate isomerase 0.94 10
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_973 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.77 PfGW456L13_3940 Phosphoribosylanthranilate isomerase (EC 5.3.1.24) 0.80 46
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_13250 dihydroxy-acid dehydratase 0.74 AO356_21440 N-(5'-phosphoribosyl)anthranilate isomerase 0.96 9
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_4564 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.75 Pf6N2E2_71 Phosphoribosylanthranilate isomerase (EC 5.3.1.24) 0.94 10
Pseudomonas simiae WCS417 0.96 PS417_26890 dihydroxy-acid dehydratase 0.78 PS417_18560 N-(5'-phosphoribosyl)anthranilate isomerase 0.90 12
Pseudomonas sp. RS175 0.96 PFR28_04278 Dihydroxy-acid dehydratase 0.78 PFR28_02816 'N-(5'-phosphoribosyl)anthranilate isomerase' transl_table=11 — —
Pseudomonas fluorescens SBW25 0.96 PFLU_RS28535 dihydroxy-acid dehydratase 0.80 PFLU_RS20540 phosphoribosylanthranilate isomerase 0.77 7
Pseudomonas fluorescens SBW25-INTG 0.96 PFLU_RS28535 dihydroxy-acid dehydratase 0.80 PFLU_RS20540 phosphoribosylanthranilate isomerase 0.75 13
Pseudomonas syringae pv. syringae B728a ΔmexB 0.94 Psyr_0469 dihydroxyacid dehydratase 0.71 Psyr_1663 phosphoribosylanthranilate isomerase 0.70 56
Pseudomonas syringae pv. syringae B728a 0.94 Psyr_0469 dihydroxyacid dehydratase 0.71 Psyr_1663 phosphoribosylanthranilate isomerase 0.70 43
Pseudomonas stutzeri RCH2 0.94 Psest_0234 dihydroxy-acid dehydratase 0.69 Psest_2584 Phosphoribosylanthranilate isomerase — —
Pseudomonas sp. S08-1 0.93 OH686_14100 dihydroxy-acid dehydratase 0.66 OH686_04445 Phosphoribosylanthranilate isomerase 0.72 30
Xanthomonas campestris pv. campestris strain 8004 0.87 Xcc-8004.451.1 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.39 Xcc-8004.1962.1 Phosphoribosylanthranilate isomerase (EC 5.3.1.24) 0.74 40
Ralstonia sp. UNC404CL21Col 0.81 ABZR87_RS00240 dihydroxy-acid dehydratase 0.45 ABZR87_RS14505 phosphoribosylanthranilate isomerase low > 80
Acidovorax sp. GW101-3H11 0.80 Ac3H11_955 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.35 Ac3H11_1533 Phosphoribosylanthranilate isomerase (EC 5.3.1.24) 0.74 20
Paraburkholderia graminis OAS925 0.80 ABIE53_006513 dihydroxy-acid dehydratase 0.46 ABIE53_004808 phosphoribosylanthranilate isomerase — —
Paraburkholderia bryophila 376MFSha3.1 0.80 H281DRAFT_05312 dihydroxyacid dehydratase 0.44 H281DRAFT_06068 phosphoribosylanthranilate isomerase low > 103
Paraburkholderia sabiae LMG 24235 0.80 QEN71_RS21095 dihydroxy-acid dehydratase 0.46 QEN71_RS17640 phosphoribosylanthranilate isomerase low > 153
Marinobacter adhaerens HP15 0.78 HP15_595 dihydroxy-acid dehydratase 0.53 HP15_1828 phosphoribosylanthranilate isomerase low > 73
Sinorhizobium meliloti 1021 0.77 SMc04045 dihydroxy-acid dehydratase 0.28 SMc02767 N-(5'-phosphoribosyl)anthranilate isomerase 0.73 82
Agrobacterium fabrum C58 0.76 Atu1918 dihydroxy-acid dehydratase 0.27 Atu0017 N-(5-phosphoribosyl) anthranilate isomerase — —
Rhizobium sp. OAE497 0.76 ABIE40_RS08005 dihydroxy-acid dehydratase 0.28 ABIE40_RS19330 phosphoribosylanthranilate isomerase low > 107
Azospirillum brasilense Sp245 0.75 AZOBR_RS15015 dihydroxy-acid dehydratase 0.28 AZOBR_RS03140 N-(5'-phosphoribosyl)anthranilate isomerase — —
Dechlorosoma suillum PS 0.75 Dsui_1122 dihydroxy-acid dehydratase 0.49 Dsui_3193 phosphoribosylanthranilate isomerase — —
Rhodopseudomonas palustris CGA009 0.74 TX73_007515 dihydroxy-acid dehydratase 0.29 TX73_000355 phosphoribosylanthranilate isomerase — —
Synechococcus elongatus PCC 7942 0.74 Synpcc7942_0626 ilvD dihydroxy-acid dehydratase 0.31 Synpcc7942_0408 trpF N-(5'-phosphoribosyl)anthranilate isomerase — —
Azospirillum sp. SherDot2 0.73 MPMX19_05356 Dihydroxy-acid dehydratase 0.32 MPMX19_02207 N-(5'-phosphoribosyl)anthranilate isomerase — —
Phaeobacter inhibens DSM 17395 0.73 PGA1_c29490 dihydroxy-acid dehydratase LivD 0.32 PGA1_c04860 N-(5'-phosphoribosyl)anthranilate isomerase TrpF — —
Caulobacter crescentus NA1000 0.72 CCNA_03139 dihydroxy-acid dehydratase 0.26 CCNA_03659 N-(5'-phosphoribosyl)anthranilate isomerase 0.93 33
Caulobacter crescentus NA1000 Δfur 0.72 CCNA_03139 dihydroxy-acid dehydratase 0.26 CCNA_03659 N-(5'-phosphoribosyl)anthranilate isomerase low > 67
Herbaspirillum seropedicae SmR1 0.72 HSERO_RS02650 dihydroxy-acid dehydratase 0.47 HSERO_RS16480 N-(5'-phosphoribosyl)anthranilate isomerase 0.82 30
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS10100 dihydroxy-acid dehydratase 0.46 BPHYT_RS33880 N-(5'-phosphoribosyl)anthranilate isomerase 0.81 9
Rhodospirillum rubrum S1H 0.70 Rru_A1786 Dihydroxy-acid dehydratase (NCBI) 0.33 Rru_A3425 Phosphoribosylanthranilate isomerase (NCBI) 0.88 19
Magnetospirillum magneticum AMB-1 0.70 AMB_RS12770 dihydroxy-acid dehydratase 0.34 AMB_RS20250 N-(5'-phosphoribosyl)anthranilate isomerase — —
Castellaniella sp019104865 MT123 0.70 ABCV34_RS14810 dihydroxy-acid dehydratase 0.39 ABCV34_RS04250 phosphoribosylanthranilate isomerase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.65 GFF2073 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.43 GFF3356 Phosphoribosylanthranilate isomerase (EC 5.3.1.24) low > 90
Parabacteroides merdae CL09T00C40 0.63 HMPREF1078_RS16695 dihydroxy-acid dehydratase 0.26 HMPREF1078_RS00125 phosphoribosylanthranilate isomerase low > 61
Phocaeicola vulgatus CL09T03C04 0.62 HMPREF1058_RS16815 dihydroxy-acid dehydratase 0.23 HMPREF1058_RS07195 phosphoribosylanthranilate isomerase 0.76 41
Phocaeicola dorei CL03T12C01 0.62 ABI39_RS12715 dihydroxy-acid dehydratase 0.23 ABI39_RS21070 phosphoribosylanthranilate isomerase — —
Bacteroides stercoris CC31F 0.62 HMPREF1181_RS08335 dihydroxy-acid dehydratase 0.23 HMPREF1181_RS15345 phosphoribosylanthranilate isomerase 0.87 28
Bacteroides thetaiotaomicron VPI-5482 0.61 BT2078 dihydroxy-acid dehydratase (NCBI ptt file) 0.20 BT0528 phosphoribosylanthranilate isomerase (EC 5.3.1.24) (from data) 0.90 20
Bacteroides ovatus ATCC 8483 0.60 BACOVA_03302 dihydroxy-acid dehydratase 0.22 BACOVA_03784 N-(5'phosphoribosyl)anthranilate isomerase 0.91 48
Bifidobacterium breve UCC2003 0.56 BBR_RS17635 dihydroxy-acid dehydratase 0.16 BBR_RS17825 phosphoribosylanthranilate isomerase low > 34
Desulfovibrio vulgaris Miyazaki F 0.37 DvMF_2034 dihydroxy-acid dehydratase (RefSeq) 0.22 DvMF_1742 Phosphoribosylanthranilate isomerase (RefSeq) 0.79 33
Desulfovibrio vulgaris Hildenborough JW710 0.37 DVU3373 ilvD dihydroxy-acid dehydratase (TIGR) 0.19 DVU0469 trpF-1 N-(5-phosphoribosyl)anthranilate isomerase (TIGR) 0.79 40
Variovorax sp. OAS795 0.31 ABID97_RS17500 dihydroxy-acid dehydratase 0.36 ABID97_RS08435 phosphoribosylanthranilate isomerase — —
Variovorax sp. SCN45 0.31 GFF471 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.33 GFF3884 Phosphoribosylanthranilate isomerase (EC 5.3.1.24) — —
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS16210 dihydroxy-acid dehydratase 0.46 RR42_RS14365 N-(5'-phosphoribosyl)anthranilate isomerase — —
Ralstonia solanacearum GMI1000 0.30 RS_RS12105 dihydroxy-acid dehydratase 0.46 RS_RS09970 phosphoribosylanthranilate isomerase — —
Bosea sp. OAE506 0.30 ABIE41_RS15690 dihydroxy-acid dehydratase 0.27 ABIE41_RS04265 phosphoribosylanthranilate isomerase — —
Ralstonia solanacearum PSI07 0.30 RPSI07_RS12840 dihydroxy-acid dehydratase 0.45 RPSI07_RS14725 phosphoribosylanthranilate isomerase — —
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS04535 dihydroxy-acid dehydratase 0.46 RALBFv3_RS02590 phosphoribosylanthranilate isomerase — —
Ralstonia solanacearum UW163 0.29 UW163_RS09135 dihydroxy-acid dehydratase 0.46 UW163_RS11135 phosphoribosylanthranilate isomerase — —
Dinoroseobacter shibae DFL-12 0.29 Dshi_0129 dihydroxy-acid dehydratase (RefSeq) 0.28 Dshi_1029 Phosphoribosylanthranilate isomerase (RefSeq) — —
Acinetobacter radioresistens SK82 0.28 MPMX26_03019 Dihydroxy-acid dehydratase 0.50 MPMX26_02618 N-(5'-phosphoribosyl)anthranilate isomerase 0.85 16
Sphingomonas koreensis DSMZ 15582 0.28 Ga0059261_4216 Dihydroxyacid dehydratase/phosphogluconate dehydratase 0.25 Ga0059261_0237 phosphoribosylanthranilate isomerase (EC 5.3.1.24) 0.94 41
Echinicola vietnamensis KMM 6221, DSM 17526 0.28 Echvi_2055 dihydroxy-acid dehydratase 0.19 Echvi_2509 Phosphoribosylanthranilate isomerase — —
Lysobacter sp. OAE881 0.27 ABIE51_RS17540 dihydroxy-acid dehydratase 0.33 ABIE51_RS08250 phosphoribosylanthranilate isomerase low > 62
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS15945 dihydroxy-acid dehydratase 0.47 ABZR86_RS08010 phosphoribosylanthranilate isomerase 0.89 55
Pontibacter actiniarum KMM 6156, DSM 19842 0.27 CA264_06935 dihydroxy-acid dehydratase 0.25 CA264_05075 hypothetical protein low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.27 CA265_RS15795 dihydroxy-acid dehydratase 0.24 CA265_RS05015 N-(5'-phosphoribosyl)anthranilate isomerase — —
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_13600 ilvD dihydroxy-acid dehydratase 0.45 OKGIIK_04835 phosphoribosylanthranilate isomerase low > 52
Mucilaginibacter yixingensis YX-36 DSM 26809 0.27 ABZR88_RS11575 dihydroxy-acid dehydratase 0.21 ABZR88_RS10670 phosphoribosylanthranilate isomerase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.25 A4249_RS10030 dihydroxy-acid dehydratase 0.27 A4249_RS11335 phosphoribosylanthranilate isomerase — —
Rhodanobacter denitrificans MT42 0.25 LRK55_RS09960 dihydroxy-acid dehydratase 0.45 LRK55_RS01475 phosphoribosylanthranilate isomerase — —
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS10320 dihydroxy-acid dehydratase 0.45 LRK54_RS01695 phosphoribosylanthranilate isomerase — —

Not shown: 35 genomes with orthologs for PP_5128 only; 0 genomes with orthologs for PP_1995 only