Conservation of cofitness between PP_0363 and PP_1079 in Pseudomonas putida KT2440

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0363 8-amino-7-oxononanoate synthase 1.0 PP_1079 Ornithine carbamoyltransferase 0.51 12
Pseudomonas syringae pv. syringae B728a ΔmexB 0.84 Psyr_4686 8-amino-7-oxononanoate synthase 0.82 Psyr_3901 ornithine carbamoyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.84 Psyr_4686 8-amino-7-oxononanoate synthase 0.82 Psyr_3901 ornithine carbamoyltransferase — —
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_1148 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.86 PfGW456L13_1739 Ornithine carbamoyltransferase (EC 2.1.3.3) 0.78 16
Pseudomonas sp. RS175 0.84 PFR28_04102 8-amino-7-oxononanoate synthase 0.86 PFR28_03363 Ornithine carbamoyltransferase 1, anabolic 0.37 22
Pseudomonas fluorescens FW300-N2E3 0.83 AO353_07520 8-amino-7-oxononanoate synthase 0.86 AO353_04155 ornithine carbamoyltransferase 0.59 43
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_4761 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.85 Pf6N2E2_5579 Ornithine carbamoyltransferase (EC 2.1.3.3) 0.53 28
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_2488 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.86 Pf1N1B4_762 Ornithine carbamoyltransferase (EC 2.1.3.3) 0.51 47
Pseudomonas fluorescens SBW25-INTG 0.82 PFLU_RS27645 8-amino-7-oxononanoate synthase 0.84 PFLU_RS05680 ornithine carbamoyltransferase — —
Pseudomonas fluorescens SBW25 0.82 PFLU_RS27645 8-amino-7-oxononanoate synthase 0.84 PFLU_RS05680 ornithine carbamoyltransferase — —
Pseudomonas simiae WCS417 0.82 PS417_26000 8-amino-7-oxononanoate synthase 0.86 PS417_05595 ornithine carbamoyltransferase 0.26 41
Pseudomonas stutzeri RCH2 0.82 Psest_0412 8-amino-7-oxononanoate synthase 0.82 Psest_1291 ornithine carbamoyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_14140 8-amino-7-oxononanoate synthase 0.86 AO356_18275 ornithine carbamoyltransferase 0.40 44
Pseudomonas sp. S08-1 0.81 OH686_10350 8-amino-7-oxononanoate synthase 0.79 OH686_20405 ornithine carbamoyltransferase low > 80
Marinobacter adhaerens HP15 0.56 HP15_2485 8-amino-7-oxononanoate synthase 0.66 HP15_750 ornithine carbamoyltransferase — —
Dechlorosoma suillum PS 0.49 Dsui_2881 8-amino-7-oxononanoate synthase 0.52 Dsui_3249 ornithine carbamoyltransferase — —
Kangiella aquimarina DSM 16071 0.48 B158DRAFT_0865 8-amino-7-oxononanoate synthase 0.20 B158DRAFT_1975 Ornithine carbamoyltransferase — —
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS15835 8-amino-7-oxononanoate synthase 0.19 ABZR86_RS08730 N-acetylornithine carbamoyltransferase 0.44 64
Rhodanobacter denitrificans MT42 0.46 LRK55_RS09895 8-amino-7-oxononanoate synthase 0.20 LRK55_RS02170 N-acetylornithine carbamoyltransferase low > 63
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS10255 8-amino-7-oxononanoate synthase 0.20 LRK54_RS02415 N-acetylornithine carbamoyltransferase low > 59
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_13655 bioF 8-amino-7-oxononanoate synthase 0.19 OKGIIK_09480 argF N-acetylornithine carbamoyltransferase low > 52
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS12245 8-amino-7-oxononanoate synthase 0.51 HSERO_RS07185 Ornithine carbamoyltransferase (EC 2.1.3.3) (from data) — —
Paraburkholderia graminis OAS925 0.37 ABIE53_000579 8-amino-7-oxononanoate synthase 0.52 ABIE53_003354 ornithine carbamoyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_02095 8-amino-7-oxononanoate synthase 0.52 H281DRAFT_04119 ornithine carbamoyltransferase low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF3995 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.50 GFF3419 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS01095 8-amino-7-oxononanoate synthase 0.51 QEN71_RS02785 ornithine carbamoyltransferase — —
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS02160 8-amino-7-oxononanoate synthase 0.51 BPHYT_RS15915 ornithine carbamoyltransferase low > 109
Acidovorax sp. GW101-3H11 0.36 Ac3H11_3830 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.51 Ac3H11_1333 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS00820 8-amino-7-oxononanoate synthase 0.50 RALBFv3_RS05185 ornithine carbamoyltransferase — —
Ralstonia solanacearum UW163 0.35 UW163_RS14155 8-amino-7-oxononanoate synthase 0.50 UW163_RS08440 ornithine carbamoyltransferase — —
Ralstonia solanacearum GMI1000 0.35 RS_RS07435 8-amino-7-oxononanoate synthase 0.50 RS_RS12805 ornithine carbamoyltransferase — —
Shewanella oneidensis MR-1 0.35 SO2739 bioF 8-amino-7-oxononanoate synthase (NCBI ptt file) 0.31 SO0277 argF ornithine carbamoyltransferase (NCBI ptt file) low > 76
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS00930 8-amino-7-oxononanoate synthase 0.50 RR42_RS17175 ornithine carbamoyltransferase — —
Variovorax sp. OAS795 0.35 ABID97_RS16260 8-amino-7-oxononanoate synthase 0.55 ABID97_RS08630 ornithine carbamoyltransferase — —
Ralstonia solanacearum PSI07 0.35 RPSI07_RS16700 8-amino-7-oxononanoate synthase 0.50 RPSI07_RS12115 ornithine carbamoyltransferase — —
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS12340 8-amino-7-oxononanoate synthase 0.51 ABZR87_RS00840 ornithine carbamoyltransferase — —
Shewanella loihica PV-4 0.35 Shew_1720 8-amino-7-oxononanoate synthase (RefSeq) 0.31 Shew_0204 ornithine carbamoyltransferase (RefSeq) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.34 CA264_07040 8-amino-7-oxononanoate synthase 0.16 CA264_06240 acetylornithine carbamoyltransferase low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.34 ABZR88_RS03035 pyridoxal phosphate-dependent aminotransferase family protein 0.14 ABZR88_RS15495 acetylornithine carbamoyltransferase — —
Pedobacter sp. GW460-11-11-14-LB5 0.34 CA265_RS13580 8-amino-7-oxononanoate synthase 0.13 CA265_RS18520 acetylornithine carbamoyltransferase low > 88
Variovorax sp. SCN45 0.32 GFF144 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.53 GFF3926 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Rhizobium sp. OAE497 0.32 ABIE40_RS12730 glycine C-acetyltransferase 0.46 ABIE40_RS02325 ornithine carbamoyltransferase low > 107
Sinorhizobium meliloti 1021 0.32 SMc01565 2-amino-3-ketobutyrate CoA ligase 0.48 SMc02137 ornithine carbamoyltransferase low > 103
Parabacteroides merdae CL09T00C40 0.32 HMPREF1078_RS16170 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.15 HMPREF1078_RS10660 acetylornithine carbamoyltransferase — —
Castellaniella sp019104865 MT123 0.31 ABCV34_RS15295 8-amino-7-oxononanoate synthase 0.51 ABCV34_RS05380 ornithine carbamoyltransferase low > 48
Methanococcus maripaludis S2 0.31 MMP_RS08100 8-amino-7-oxononanoate synthase 0.33 MMP_RS02925 ornithine carbamoyltransferase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.30 Echvi_0145 2-amino-3-ketobutyrate coenzyme A ligase 0.17 Echvi_3849 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) low > 79
Phaeobacter inhibens DSM 17395 0.30 PGA1_c34330 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) (from data) 0.44 PGA1_c24220 ornithine carbamoyltransferase ArgF low > 62
Methanococcus maripaludis JJ 0.30 MMJJ_RS06265 8-amino-7-oxononanoate synthase 0.33 MMJJ_RS02150 ornithine carbamoyltransferase — —
Synechococcus elongatus PCC 7942 0.30 Synpcc7942_0027 bioF 8-amino-7-oxononanoate synthase 0.44 Synpcc7942_2514 argF ornithine carbamoyltransferase — —
Azospirillum brasilense Sp245 0.30 AZOBR_RS31105 8-amino-7-oxononanoate synthase 0.45 AZOBR_RS19030 ornithine carbamoyltransferase — —
Caulobacter crescentus NA1000 0.28 CCNA_01647 8-amino-7-oxononanoate synthase 0.46 CCNA_02325 ornithine carbamoyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.28 CCNA_01647 8-amino-7-oxononanoate synthase 0.46 CCNA_02325 ornithine carbamoyltransferase low > 67
Magnetospirillum magneticum AMB-1 0.28 AMB_RS13875 8-amino-7-oxononanoate synthase 0.47 AMB_RS01610 ornithine carbamoyltransferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.28 A4249_RS02505 glycine C-acetyltransferase 0.51 A4249_RS11920 ornithine carbamoyltransferase low > 48
Rhodopseudomonas palustris CGA009 0.28 TX73_007985 5-aminolevulinate synthase 0.46 TX73_024805 ornithine carbamoyltransferase — —
Dinoroseobacter shibae DFL-12 0.27 Dshi_3546 5-aminolevulinic acid synthase (RefSeq) 0.44 Dshi_0796 ornithine carbamoyltransferase (RefSeq) low > 64
Sphingomonas koreensis DSMZ 15582 0.27 Ga0059261_3508 7-keto-8-aminopelargonate synthetase and related enzymes 0.45 Ga0059261_3206 ornithine carbamoyltransferase — —
Azospirillum sp. SherDot2 0.27 MPMX19_02203 5-aminolevulinate synthase 0.45 MPMX19_02178 Ornithine carbamoyltransferase, anabolic — —
Bosea sp. OAE506 0.27 ABIE41_RS04425 5-aminolevulinate synthase 0.41 ABIE41_RS04335 ornithine carbamoyltransferase — —
Rhodospirillum rubrum S1H 0.26 Rru_A1146 5-aminolevulinic acid synthase (NCBI) 0.50 Rru_A3276 Ornithine carbamoyltransferase (NCBI) low > 58
Acinetobacter radioresistens SK82 0.26 MPMX26_02453 8-amino-7-oxononanoate synthase 2 0.62 MPMX26_01287 Ornithine carbamoyltransferase 1, anabolic low > 36
Agrobacterium fabrum C58 0.25 Atu2613 5-aminolevulinate synthase 0.47 Atu0429 ornithine carbamoyltransferase — —
Desulfovibrio vulgaris Hildenborough JW710 0.20 DVU2564 bioF 8-amino-7-oxononanoate synthase (Dmitry Rodionov) 0.45 DVU1096 argF ornithine carbamoyltransferase (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.18 DvMF_1008 aminotransferase class I and II (RefSeq) 0.45 DvMF_0046 ornithine carbamoyltransferase (RefSeq) low > 51

Not shown: 37 genomes with orthologs for PP_0363 only; 2 genomes with orthologs for PP_1079 only