| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens SBW25 | 1.0 | PFLU_RS03610 | | redox-regulated ATPase YchF | 1.0 | PFLU_RS25720 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.80 | 12 |
| Pseudomonas fluorescens SBW25-INTG | 1.00 | PFLU_RS03610 | | redox-regulated ATPase YchF | 1.00 | PFLU_RS25720 | | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 109 |
| Pseudomonas simiae WCS417 | 0.97 | PS417_03560 | | GTP-binding protein | 0.94 | PS417_23880 | | glutamyl-Q tRNA(Asp) ligase | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.96 | AO356_16450 | | GTP-binding protein | 0.84 | AO356_16090 | | glutamyl-Q tRNA(Asp) ligase | low | > 104 |
| Pseudomonas fluorescens GW456-L13 | 0.96 | PfGW456L13_1574 | | GTP-binding and nucleic acid-binding protein YchF | 0.84 | PfGW456L13_1527 | | glutamyl-Q-tRNA synthetase | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.96 | AO353_14740 | | GTP-binding protein | 0.84 | AO353_14415 | | glutamyl-Q tRNA(Asp) ligase | low | > 101 |
| Pseudomonas syringae pv. syringae B728a | 0.96 | Psyr_0941 | | Conserved hypothetical protein 92 | 0.73 | Psyr_0834 | | Glutamyl-tRNA synthetase, class Ic | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.96 | Psyr_0941 | | Conserved hypothetical protein 92 | 0.73 | Psyr_0834 | | Glutamyl-tRNA synthetase, class Ic | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.95 | Pf1N1B4_2912 | | GTP-binding and nucleic acid-binding protein YchF | 0.81 | Pf1N1B4_2861 | | glutamyl-Q-tRNA synthetase | low | > 87 |
| Pseudomonas sp. RS175 | 0.94 | PFR28_03664 | | Ribosome-binding ATPase YchF | 0.82 | PFR28_03715 | | Glutamyl-Q tRNA(Asp) synthetase | low | > 88 |
| Pseudomonas putida KT2440 | 0.92 | PP_0719 | | ribosome-associated potassium-dependent informational ATP/GTPase | 0.72 | PP_4694 | | Glutamyl-Q tRNA(Asp) synthetase | low | > 96 |
| Pseudomonas sp. S08-1 | 0.90 | OH686_07965 | | GTP-binding and nucleic acid-binding protein YchF | 0.79 | OH686_17275 | | glutamyl-queuosine tRNA(Asp) synthetase | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.89 | Psest_1103 | | GTP-binding protein YchF | 0.73 | Psest_1002 | | glutamyl-queuosine tRNA(Asp) synthetase | low | > 67 |
| Marinobacter adhaerens HP15 | 0.75 | HP15_704 | | translation-associated GTPase | 0.39 | HP15_331 | | glutamyl-Q tRNA(Asp) synthetase | low | > 73 |
| Acinetobacter radioresistens SK82 | 0.75 | MPMX26_01861 | | Ribosome-binding ATPase YchF | 0.42 | MPMX26_00176 | | Glutamyl-Q tRNA(Asp) synthetase | low | > 36 |
| Shewanella amazonensis SB2B | 0.71 | Sama_2571 | | GTP-dependent nucleic acid-binding protein EngD (RefSeq) | 0.41 | Sama_0779 | | glutamyl-tRNA synthetase domain-containing protein (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.71 | Shewana3_1012 | | GTP-dependent nucleic acid-binding protein EngD (RefSeq) | 0.40 | Shewana3_3405 | | glutamyl-tRNA synthetase, class Ic (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.71 | SO1185 | | conserved hypothetical protein TIGR00092 (NCBI ptt file) | 0.40 | SO0873 | | glutamyl-tRNA synthetase domain protein (NCBI ptt file) | low | > 76 |
| Escherichia coli ECRC62 | 0.70 | BNILDI_18805 | ychF | redox-regulated ATPase YchF | 0.46 | BNILDI_08975 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 75 |
| Escherichia coli Nissle 1917 | 0.70 | ECOLIN_RS07280 | | redox-regulated ATPase YchF | 0.45 | ECOLIN_RS00795 | | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 55 |
| Escherichia coli ECOR38 | 0.70 | HEPCGN_24875 | ychF | redox-regulated ATPase YchF | 0.46 | HEPCGN_08300 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 87 |
| Escherichia coli ECRC102 | 0.70 | NIAGMN_27825 | ychF | redox-regulated ATPase YchF | 0.45 | NIAGMN_08200 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.70 | OHPLBJKB_02484 | | Ribosome-binding ATPase YchF | 0.46 | OHPLBJKB_03518 | | Glutamyl-Q tRNA(Asp) synthetase | low | > 73 |
| Escherichia coli ECRC101 | 0.70 | MCAODC_21850 | ychF | redox-regulated ATPase YchF | 0.45 | MCAODC_00865 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 87 |
| Escherichia coli ECRC100 | 0.70 | OKFHMN_28410 | ychF | redox-regulated ATPase YchF | 0.45 | OKFHMN_10350 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | — | — |
| Escherichia coli ECRC99 | 0.70 | KEDOAH_25405 | ychF | redox-regulated ATPase YchF | 0.45 | KEDOAH_17805 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | — | — |
| Escherichia coli ECRC98 | 0.70 | JDDGAC_06165 | ychF | redox-regulated ATPase YchF | 0.45 | JDDGAC_13945 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 86 |
| Escherichia fergusonii Becca | 0.70 | EFB2_02724 | | Ribosome-binding ATPase YchF | 0.46 | EFB2_03900 | | Glutamyl-Q tRNA(Asp) synthetase | low | > 86 |
| Escherichia coli ECOR27 | 0.70 | NOLOHH_20650 | ychF | redox-regulated ATPase YchF | 0.46 | NOLOHH_02695 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | — | — |
| Escherichia coli BW25113 | 0.70 | b1203 | ychF | translation-associated GTPase (NCBI) | 0.46 | b0144 | yadB | glutamyl-Q tRNA(Asp) synthetase (RefSeq) | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.70 | GFF2784 | | GTP-binding and nucleic acid-binding protein YchF | 0.46 | GFF88 | | glutamyl-Q-tRNA synthetase | low | > 78 |
| Erwinia tracheiphila SCR3 | 0.70 | LU632_RS13950 | ychF | redox-regulated ATPase YchF | 0.42 | LU632_RS20085 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 74 |
| Escherichia coli BL21 | 0.70 | ECD_01178 | | catalase inhibitor protein; ATPase, K+-dependent, ribosome-associated | 0.46 | ECD_00143 | | glutamyl-Q tRNA(Asp) synthetase | — | — |
| Dickeya dianthicola ME23 | 0.69 | DZA65_RS11435 | | redox-regulated ATPase YchF | 0.44 | DZA65_RS17140 | | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 75 |
| Pantoea sp. MT58 | 0.69 | IAI47_11310 | | redox-regulated ATPase YchF | 0.43 | IAI47_15640 | | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 76 |
| Dickeya dianthicola 67-19 | 0.69 | HGI48_RS10975 | | redox-regulated ATPase YchF | 0.44 | HGI48_RS16055 | | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 71 |
| Dickeya dadantii 3937 | 0.69 | DDA3937_RS11035 | | redox-regulated ATPase YchF | 0.42 | DDA3937_RS15940 | | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 74 |
| Kangiella aquimarina DSM 16071 | 0.69 | B158DRAFT_2052 | | GTP-binding protein YchF | 0.42 | B158DRAFT_0057 | | glutamyl-queuosine tRNA(Asp) synthetase | low | > 40 |
| Pectobacterium carotovorum WPP14 | 0.69 | HER17_RS10445 | | redox-regulated ATPase YchF | 0.44 | HER17_RS05575 | | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 75 |
| Dyella japonica UNC79MFTsu3.2 | 0.68 | ABZR86_RS22010 | | redox-regulated ATPase YchF | 0.42 | ABZR86_RS00575 | | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 74 |
| Lysobacter sp. OAE881 | 0.68 | ABIE51_RS05745 | | redox-regulated ATPase YchF | 0.40 | ABIE51_RS13520 | | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 62 |
| Klebsiella michiganensis M5al | 0.68 | BWI76_RS17485 | | GTP-binding protein YchF | 0.42 | BWI76_RS05010 | | tRNA glutamyl-Q synthetase | — | — |
| Alteromonas macleodii MIT1002 | 0.68 | MIT1002_01504 | | Ribosome-binding ATPase YchF | 0.38 | MIT1002_03691 | | Glutamyl-Q tRNA(Asp) synthetase | low | > 70 |
| Enterobacter sp. TBS_079 | 0.68 | MPMX20_02645 | | Ribosome-binding ATPase YchF | 0.44 | MPMX20_00830 | | Glutamyl-Q tRNA(Asp) synthetase | low | > 85 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.68 | Xcc-8004.4168.1 | | GTP-binding and nucleic acid-binding protein YchF | 0.43 | Xcc-8004.2261.1 | | glutamyl-Q-tRNA synthetase | low | > 74 |
| Rahnella sp. WP5 | 0.68 | EX31_RS07380 | | redox-regulated ATPase YchF | 0.43 | EX31_RS03255 | | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 89 |
| Shewanella loihica PV-4 | 0.68 | Shew_2919 | | translation-associated GTPase (RefSeq) | 0.41 | Shew_3130 | | glutamate--tRNA ligase (RefSeq) | low | > 60 |
| Enterobacter asburiae PDN3 | 0.67 | EX28DRAFT_0821 | | GTP-binding protein YchF | 0.43 | EX28DRAFT_3733 | | glutamyl-queuosine tRNA(Asp) synthetase | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.67 | CSW01_10875 | | redox-regulated ATPase YchF | 0.42 | CSW01_03150 | | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 62 |
| Serratia liquefaciens MT49 | 0.67 | IAI46_10240 | | redox-regulated ATPase YchF | 0.44 | IAI46_21215 | | tRNA glutamyl-Q(34) synthetase GluQRS | — | — |
| Burkholderia phytofirmans PsJN | 0.66 | BPHYT_RS17445 | | GTP-binding protein YchF | 0.38 | BPHYT_RS06160 | | glutamyl-Q tRNA(Asp) ligase | low | > 109 |
| Castellaniella sp019104865 MT123 | 0.66 | ABCV34_RS09215 | | redox-regulated ATPase YchF | 0.37 | ABCV34_RS12295 | | glutamyl-Q tRNA(Asp) synthetase | — | — |
| Paraburkholderia graminis OAS925 | 0.66 | ABIE53_003650 | | GTP-binding protein YchF | 0.38 | ABIE53_001439 | | glutamyl-Q tRNA(Asp) synthetase | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.66 | H281DRAFT_05705 | | hypothetical protein | 0.38 | H281DRAFT_00309 | | glutamyl-Q tRNA(Asp) synthetase | low | > 103 |
| Rhodanobacter sp. FW510-T8 | 0.66 | OKGIIK_10565 | | Ribosome-binding ATPase YchF | 0.39 | OKGIIK_03640 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 52 |
| Rhodanobacter denitrificans FW104-10B01 | 0.66 | LRK54_RS03675 | | redox-regulated ATPase YchF | 0.38 | LRK54_RS14820 | | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.66 | LRK55_RS03425 | | redox-regulated ATPase YchF | 0.38 | LRK55_RS14535 | | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 63 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.65 | GFF630 | | GTP-binding and nucleic acid-binding protein YchF | 0.34 | GFF5183 | | glutamyl-Q-tRNA synthetase | low | > 90 |
| Paraburkholderia sabiae LMG 24235 | 0.65 | QEN71_RS27600 | | redox-regulated ATPase YchF | 0.39 | QEN71_RS24480 | | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 153 |
| Ralstonia solanacearum GMI1000 | 0.65 | RS_RS14520 | | redox-regulated ATPase YchF | 0.35 | RS_RS11090 | | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.65 | ABZR87_RS02220 | | redox-regulated ATPase YchF | 0.37 | ABZR87_RS15535 | | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.64 | RPSI07_RS10660 | | redox-regulated ATPase YchF | 0.35 | RPSI07_RS13585 | | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 81 |
| Variovorax sp. SCN45 | 0.64 | GFF2141 | | GTP-binding and nucleic acid-binding protein YchF | 0.33 | GFF592 | | Glutamyl-Q tRNA(Asp) synthetase | low | > 127 |
| Ralstonia solanacearum UW163 | 0.63 | UW163_RS07055 | | redox-regulated ATPase YchF | 0.36 | UW163_RS10025 | | tRNA glutamyl-Q(34) synthetase GluQRS | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.63 | RALBFv3_RS06570 | | redox-regulated ATPase YchF | 0.36 | RALBFv3_RS03645 | | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 76 |
| Variovorax sp. OAS795 | 0.63 | ABID97_RS24750 | | redox-regulated ATPase YchF | 0.32 | ABID97_RS18025 | | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 91 |
| Dechlorosoma suillum PS | 0.62 | Dsui_1039 | | GTP-binding protein YchF | 0.44 | Dsui_1040 | | glutamyl-queuosine tRNA(Asp) synthetase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.62 | HSERO_RS20405 | | GTP-binding protein YchF | 0.36 | HSERO_RS17850 | | glutamyl-Q tRNA(Asp) ligase | low | > 78 |
| Rhodopseudomonas palustris CGA009 | 0.58 | TX73_022570 | | redox-regulated ATPase YchF | 0.21 | TX73_024705 | | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 86 |
| Dinoroseobacter shibae DFL-12 | 0.57 | Dshi_0954 | | GTP-binding protein YchF (RefSeq) | 0.24 | Dshi_1474 | | glutamyl-tRNA synthetase class Ic (RefSeq) | — | — |
| Phaeobacter inhibens DSM 17395 | 0.56 | PGA1_c04950 | | GTP-dependent nucleic acid-binding protein EngD | 0.23 | PGA1_c14410 | | putative glutamyl-tRNA synthetase | low | > 62 |
| Rhodospirillum rubrum S1H | 0.56 | Rru_A3748 | | hypothetical protein (NCBI) | 0.23 | Rru_A3734 | | Glutamyl-tRNA synthetase, class Ic (NCBI) | low | > 58 |
| Caulobacter crescentus NA1000 Δfur | 0.55 | CCNA_00512 | | GTP-binding protein, probable translation factor | 0.22 | CCNA_02288 | | tRNA synthetase class I, catalytic domain protein | low | > 67 |
| Caulobacter crescentus NA1000 | 0.55 | CCNA_00512 | | GTP-binding protein, probable translation factor | 0.22 | CCNA_02288 | | tRNA synthetase class I, catalytic domain protein | low | > 66 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.54 | A4249_RS09035 | | redox-regulated ATPase YchF | 0.21 | A4249_RS11885 | | tRNA glutamyl-Q(34) synthetase GluQRS | low | > 48 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.52 | DVU1429 | | GTP-binding protein (TIGR) | 0.29 | DVU1693 | gltX-1 | glutamyl-tRNA synthetase (TIGR) | low | > 55 |
| Synechococcus elongatus PCC 7942 | 0.51 | Synpcc7942_0554 | ychF | translation-associated GTPase | 0.38 | Synpcc7942_0922 | gltX | Glutamate--tRNA ligase | low | > 38 |
| Bifidobacterium breve UCC2003 | 0.45 | BBR_RS14650 | | redox-regulated ATPase YchF | 0.26 | BBR_RS19695 | | tRNA glutamyl-Q(34) synthetase GluQRS | — | — |
Not shown: 25 genomes with orthologs for PFLU_RS03610 only; 1 genomes with orthologs for PFLU_RS25720 only