| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens SBW25 | 1.0 | PFLU_RS02430 | | phosphomethylpyrimidine synthase ThiC | 1.0 | PFLU_RS18970 | | methylcrotonoyl-CoA carboxylase | 0.84 | 8 |
| Pseudomonas fluorescens SBW25-INTG | 1.00 | PFLU_RS02430 | | phosphomethylpyrimidine synthase ThiC | 1.00 | PFLU_RS18970 | | methylcrotonoyl-CoA carboxylase | low | > 109 |
| Pseudomonas simiae WCS417 | 0.98 | PS417_02355 | | thiamine biosynthesis protein ThiC | 0.98 | PS417_17020 | | methylcrotonoyl-CoA carboxylase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.95 | Psyr_0544 | | hydroxymethylpyrimidine synthase | 0.89 | Psyr_2469 | | Propionyl-CoA carboxylase | low | > 86 |
| Pseudomonas fluorescens FW300-N2E3 | 0.95 | AO353_13010 | | thiamine biosynthesis protein ThiC | 0.94 | AO353_20345 | | methylcrotonoyl-CoA carboxylase | low | > 101 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.95 | Psyr_0544 | | hydroxymethylpyrimidine synthase | 0.89 | Psyr_2469 | | Propionyl-CoA carboxylase | low | > 86 |
| Pseudomonas fluorescens FW300-N2E2 | 0.95 | Pf6N2E2_3644 | | Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) | 0.93 | Pf6N2E2_2192 | | 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.94 | AO356_08810 | | thiamine biosynthesis protein ThiC | 0.93 | AO356_01585 | | 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) | 0.25 | 44 |
| Pseudomonas fluorescens FW300-N1B4 | 0.94 | Pf1N1B4_1447 | | Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) | 0.95 | Pf1N1B4_3986 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) | low | > 87 |
| Pseudomonas sp. RS175 | 0.94 | PFR28_05091 | | Phosphomethylpyrimidine synthase | 0.91 | PFR28_01259 | | Methylmalonyl-CoA carboxyltransferase 12S subunit | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.94 | PfGW456L13_187 | | Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) | 0.95 | PfGW456L13_2590 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) | low | > 87 |
| Pseudomonas putida KT2440 | 0.91 | PP_4922 | | Phosphomethylpyrimidine synthase | 0.91 | PP_4065 | | methylcrotonyl-CoA carboxylase biotin-containing subunit beta | low | > 96 |
| Pseudomonas sp. S08-1 | 0.89 | OH686_15885 | | phosphomethylpyrimidine synthase | 0.89 | OH686_00850 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.89 | Psest_0477 | | thiamine biosynthesis protein ThiC | 0.87 | Psest_1083 | | 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) | low | > 67 |
| Marinobacter adhaerens HP15 | 0.80 | HP15_453 | | thiamine biosynthesis protein thiC | 0.78 | HP15_1004 | | 3-methylcrotonyl CoA carboxylase, beta subunit | low | > 73 |
| Herbaspirillum seropedicae SmR1 | 0.76 | HSERO_RS02120 | | phosphomethylpyrimidine synthase ThiC | 0.73 | HSERO_RS23455 | | methylcrotonoyl-CoA carboxylase | low | > 78 |
| Dyella japonica UNC79MFTsu3.2 | 0.75 | ABZR86_RS17230 | | phosphomethylpyrimidine synthase ThiC | 0.73 | ABZR86_RS20580 | | carboxyl transferase domain-containing protein | low | > 74 |
| Dechlorosoma suillum PS | 0.75 | Dsui_0422 | | thiamine biosynthesis protein ThiC | 0.75 | Dsui_0980 | | acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.75 | QEN71_RS05480 | | phosphomethylpyrimidine synthase ThiC | 0.73 | QEN71_RS12865 | | carboxyl transferase domain-containing protein | low | > 153 |
| Castellaniella sp019104865 MT123 | 0.75 | ABCV34_RS10825 | | phosphomethylpyrimidine synthase ThiC | 0.69 | ABCV34_RS12355 | | carboxyl transferase domain-containing protein | low | > 48 |
| Burkholderia phytofirmans PsJN | 0.75 | BPHYT_RS13220 | | phosphomethylpyrimidine synthase | 0.73 | BPHYT_RS23265 | | methylcrotonoyl-CoA carboxylase | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.75 | ABIE53_002857 | | phosphomethylpyrimidine synthase | 0.73 | ABIE53_005466 | | 3-methylcrotonyl-CoA carboxylase beta subunit | low | > 113 |
| Lysobacter sp. OAE881 | 0.74 | ABIE51_RS17515 | | phosphomethylpyrimidine synthase ThiC | 0.68 | ABIE51_RS13160 | | carboxyl transferase domain-containing protein | low | > 62 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.74 | H281DRAFT_00395 | | hydroxymethylpyrimidine synthase | 0.72 | H281DRAFT_01345 | | 3-methylcrotonyl-CoA carboxylase beta subunit | low | > 103 |
| Rhodanobacter sp. FW510-T8 | 0.74 | OKGIIK_16965 | thiC | phosphomethylpyrimidine synthase ThiC | 0.73 | OKGIIK_04015 | | Methylcrotonoyl-CoA carboxylase | low | > 52 |
| Acinetobacter radioresistens SK82 | 0.74 | MPMX26_00180 | | Phosphomethylpyrimidine synthase | 0.74 | MPMX26_00631 | | Propionyl-CoA carboxylase beta chain | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.74 | CA264_20435 | | phosphomethylpyrimidine synthase ThiC | 0.46 | CA264_20625 | | methylcrotonoyl-CoA carboxylase | low | > 74 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.73 | CA265_RS20165 | | phosphomethylpyrimidine synthase ThiC | 0.47 | CA265_RS10640 | | methylcrotonoyl-CoA carboxylase | low | > 88 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.73 | Xcc-8004.1066.1 | | hypothetical protein | 0.70 | Xcc-8004.319.1 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) | low | > 74 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.73 | ABZR88_RS08840 | | phosphomethylpyrimidine synthase ThiC | 0.47 | ABZR88_RS10315 | | acyl-CoA carboxylase subunit beta | low | > 71 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.72 | Echvi_3567 | | thiamine biosynthesis protein ThiC | 0.45 | Echvi_0113 | | Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) | low | > 79 |
| Ralstonia sp. UNC404CL21Col | 0.72 | ABZR87_RS04785 | | phosphomethylpyrimidine synthase ThiC | 0.73 | ABZR87_RS06280 | | carboxyl transferase domain-containing protein | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.72 | RPSI07_RS23420 | | phosphomethylpyrimidine synthase ThiC | 0.73 | RPSI07_RS22835 | | methylcrotonoyl-CoA carboxylase | low | > 81 |
| Shewanella loihica PV-4 | 0.71 | Shew_2096 | | thiamine biosynthesis protein ThiC (RefSeq) | 0.74 | Shew_2571 | | propionyl-CoA carboxylase (RefSeq) | low | > 60 |
| Ralstonia solanacearum IBSBF1503 | 0.71 | RALBFv3_RS09940 | | phosphomethylpyrimidine synthase ThiC | 0.72 | RALBFv3_RS10480 | | methylcrotonoyl-CoA carboxylase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.71 | UW163_RS03640 | | phosphomethylpyrimidine synthase ThiC | 0.72 | UW163_RS03100 | | methylcrotonoyl-CoA carboxylase | — | — |
| Kangiella aquimarina DSM 16071 | 0.71 | B158DRAFT_0295 | | hydroxymethylpyrimidine synthase | 0.76 | B158DRAFT_2509 | | Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.71 | RR42_RS01290 | | thiamine biosynthesis protein ThiC | 0.72 | RR42_RS26905 | | methylcrotonoyl-CoA carboxylase | low | > 128 |
| Ralstonia solanacearum GMI1000 | 0.71 | RS_RS00555 | | phosphomethylpyrimidine synthase | 0.73 | RS_RS01320 | | methylcrotonoyl-CoA carboxylase | low | > 80 |
| Shewanella amazonensis SB2B | 0.71 | Sama_1860 | | thiamine biosynthesis protein ThiC (RefSeq) | 0.74 | Sama_1361 | | 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.69 | SO2445 | thiC | thiamin biosynthesis protein ThiC (NCBI ptt file) | 0.73 | SO1896 | pccB-1 | 3-methylcrotonyl CoA carboxylase, beta subunit (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.69 | Shewana3_1936 | | thiamine biosynthesis protein ThiC (RefSeq) | 0.73 | Shewana3_1671 | | carboxyl transferase (RefSeq) | low | > 73 |
| Alteromonas macleodii MIT1002 | 0.68 | MIT1002_00097 | | Phosphomethylpyrimidine synthase | 0.74 | MIT1002_01668 | | Methylmalonyl-CoA carboxyltransferase 12S subunit | low | > 70 |
| Variovorax sp. SCN45 | 0.67 | GFF2000 | | Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) | 0.73 | GFF2008 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) | low | > 127 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.67 | GFF4626 | | Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) | 0.72 | GFF1715 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) | low | > 90 |
| Acidovorax sp. GW101-3H11 | 0.66 | Ac3H11_2027 | | Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) | 0.73 | Ac3H11_3010 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) | — | — |
| Variovorax sp. OAS795 | 0.66 | ABID97_RS25235 | | phosphomethylpyrimidine synthase ThiC | 0.71 | ABID97_RS25130 | | carboxyl transferase domain-containing protein | low | > 91 |
| Magnetospirillum magneticum AMB-1 | 0.66 | AMB_RS01125 | | phosphomethylpyrimidine synthase | 0.73 | AMB_RS03475 | | methylcrotonoyl-CoA carboxylase | — | — |
| Azospirillum brasilense Sp245 | 0.65 | AZOBR_RS07940 | | phosphomethylpyrimidine synthase | 0.77 | AZOBR_RS22295 | | methylcrotonoyl-CoA carboxylase | low | > 97 |
| Phaeobacter inhibens DSM 17395 | 0.64 | PGA1_c09110 | | thiamine biosynthesis protein ThiC | 0.66 | PGA1_c10320 | | methylcrotonoyl-CoA carboxylase beta chain | — | — |
| Caulobacter crescentus NA1000 | 0.64 | CCNA_02109 | | thiamine biosynthesis protein thiC | 0.68 | CCNA_02252 | | methylcrotonyl-CoA carboxylase carboxyl transferase subunit | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.64 | CCNA_02109 | | thiamine biosynthesis protein thiC | 0.68 | CCNA_02252 | | methylcrotonyl-CoA carboxylase carboxyl transferase subunit | low | > 67 |
| Agrobacterium fabrum C58 | 0.64 | Atu2569 | | thiamine biosynthesis protein | 0.75 | Atu3478 | | 3-methylcrotonoyl-CoA carboxylase beta subunit | low | > 89 |
| Rhodopseudomonas palustris CGA009 | 0.64 | TX73_018540 | | phosphomethylpyrimidine synthase ThiC | 0.70 | TX73_013115 | | carboxyl transferase domain-containing protein | low | > 86 |
| Sinorhizobium meliloti 1021 | 0.63 | SM_b20615 | | thiamine biosynthesis protein ThiC | 0.69 | SM_b21122 | | 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) | low | > 103 |
| Dinoroseobacter shibae DFL-12 | 0.63 | Dshi_4080 | | thiamine biosynthesis protein ThiC (RefSeq) | 0.63 | Dshi_1300 | | Propionyl-CoA carboxylase (RefSeq) | — | — |
| Bosea sp. OAE506 | 0.63 | ABIE41_RS02770 | | phosphomethylpyrimidine synthase ThiC | 0.67 | ABIE41_RS14815 | | carboxyl transferase domain-containing protein | low | > 77 |
| Azospirillum sp. SherDot2 | 0.63 | MPMX19_00336 | | Phosphomethylpyrimidine synthase | 0.76 | MPMX19_03938 | | Methylmalonyl-CoA carboxyltransferase 12S subunit | low | > 112 |
| Sphingomonas koreensis DSMZ 15582 | 0.63 | Ga0059261_2424 | | hydroxymethylpyrimidine synthase | 0.67 | Ga0059261_4055 | | Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) | low | > 68 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.62 | A4249_RS15715 | | phosphomethylpyrimidine synthase ThiC | 0.68 | A4249_RS03795 | | carboxyl transferase domain-containing protein | low | > 48 |
| Rhodospirillum rubrum S1H | 0.60 | Rru_A2008 | | Thiamine biosynthesis protein ThiC (NCBI) | 0.72 | Rru_A1943 | | Propionyl-CoA carboxylase (NCBI) | low | > 58 |
| Phocaeicola vulgatus CL09T03C04 | 0.57 | HMPREF1058_RS03280 | | phosphomethylpyrimidine synthase ThiC | 0.22 | HMPREF1058_RS16505 | | acyl-CoA carboxylase subunit beta | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.57 | ABI39_RS17760 | | phosphomethylpyrimidine synthase ThiC | 0.22 | ABI39_RS12425 | | acyl-CoA carboxylase subunit beta | low | > 72 |
| Parabacteroides merdae CL09T00C40 | 0.57 | HMPREF1078_RS03485 | | phosphomethylpyrimidine synthase ThiC | 0.25 | HMPREF1078_RS00210 | | acyl-CoA carboxylase subunit beta | low | > 61 |
| Bacteroides ovatus ATCC 8483 | 0.57 | BACOVA_02358 | | thiamine biosynthesis protein ThiC | 0.23 | BACOVA_01463 | | carboxyl transferase domain protein | low | > 94 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.56 | BT0650 | | thiamine biosynthesis protein ThiC (NCBI ptt file) | 0.23 | BT1917 | | propionyl-CoA carboxylase beta chain (NCBI ptt file) | low | > 81 |
| Bacteroides stercoris CC31F | 0.56 | HMPREF1181_RS14685 | | phosphomethylpyrimidine synthase ThiC | 0.22 | HMPREF1181_RS13215 | | acyl-CoA carboxylase subunit beta | — | — |
| Mycobacterium tuberculosis H37Rv | 0.52 | Rv0423c | | Probable thiamine biosynthesis protein ThiC | 0.64 | Rv2502c | | Probable acetyl-/propionyl-CoA carboxylase (beta subunit) AccD1 | — | — |
Not shown: 26 genomes with orthologs for PFLU_RS02430 only; 5 genomes with orthologs for PFLU_RS18970 only