Conservation of cofitness between OKFHMN_21800 and OKFHMN_22825 in Escherichia coli ECRC100

80 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC100 1.0 OKFHMN_21800 ppk1 polyphosphate kinase 1 1.0 OKFHMN_22825 alaA alanine transaminase AlaA 0.71 16
Escherichia coli ECRC102 1.00 NIAGMN_19570 ppk1 polyphosphate kinase 1 1.00 NIAGMN_20595 alaA alanine transaminase AlaA — —
Escherichia coli ECRC99 1.00 KEDOAH_06420 ppk1 polyphosphate kinase 1 1.00 KEDOAH_05370 alaA alanine transaminase AlaA — —
Escherichia coli ECRC101 1.00 MCAODC_12330 ppk1 polyphosphate kinase 1 1.00 MCAODC_13865 alaA alanine transaminase AlaA low > 87
Escherichia coli BW25113 1.00 b2501 ppk polyphosphate kinase (NCBI) 0.99 b2290 yfbQ aspartate aminotransferase (NCBI) low > 76
Escherichia coli ECOR38 1.00 HEPCGN_20965 ppk1 polyphosphate kinase 1 0.99 HEPCGN_22030 alaA alanine transaminase AlaA low > 87
Escherichia coli ECRC98 1.00 JDDGAC_25745 ppk1 polyphosphate kinase 1 1.00 JDDGAC_26790 alaA alanine transaminase AlaA low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01225 Polyphosphate kinase 0.99 OHPLBJKB_01415 Glutamate-pyruvate aminotransferase AlaA low > 73
Escherichia coli BL21 1.00 ECD_02393 polyphosphate kinase, component of RNA degradosome 0.99 ECD_02215 glutamate-pyruvate aminotransferase; glutamic-pyruvic transaminase (GPT); alanine transaminase low > 61
Escherichia coli ECRC62 1.00 BNILDI_12260 ppk1 polyphosphate kinase 1 0.99 BNILDI_13365 alaA alanine transaminase AlaA low > 75
Escherichia coli ECOR27 1.00 NOLOHH_13450 ppk1 polyphosphate kinase 1 0.99 NOLOHH_14445 alaA alanine transaminase AlaA low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS14200 polyphosphate kinase 1 0.99 ECOLIN_RS13295 alanine transaminase AlaA low > 55
Escherichia fergusonii Becca 1.00 EFB2_01397 Polyphosphate kinase 0.99 EFB2_01568 Glutamate-pyruvate aminotransferase AlaA low > 86
Enterobacter sp. TBS_079 0.95 MPMX20_03356 Polyphosphate kinase 0.96 MPMX20_03220 Glutamate-pyruvate aminotransferase AlaA low > 85
Enterobacter asburiae PDN3 0.95 EX28DRAFT_0166 polyphosphate kinase 1 0.96 EX28DRAFT_0319 Aspartate/tyrosine/aromatic aminotransferase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF2167 Polyphosphate kinase (EC 2.7.4.1) 0.97 GFF1894 Aspartate aminotransferase (EC 2.6.1.1) low > 78
Klebsiella michiganensis M5al 0.92 BWI76_RS20995 RNA degradosome polyphosphate kinase 0.97 BWI76_RS20205 aminotransferase AlaT low > 92
Erwinia tracheiphila SCR3 0.87 LU632_RS08260 ppk1 polyphosphate kinase 1 0.91 LU632_RS07955 pyridoxal phosphate-dependent aminotransferase 0.58 32
Serratia liquefaciens MT49 0.86 IAI46_18915 polyphosphate kinase 1 0.91 IAI46_17720 pyridoxal phosphate-dependent aminotransferase low > 86
Rahnella sp. WP5 0.85 EX31_RS22680 polyphosphate kinase 1 0.87 EX31_RS19445 pyridoxal phosphate-dependent aminotransferase low > 89
Pantoea sp. MT58 0.84 IAI47_05155 polyphosphate kinase 1 0.93 IAI47_06350 pyridoxal phosphate-dependent aminotransferase low > 76
Dickeya dadantii 3937 0.83 DDA3937_RS15150 polyphosphate kinase 1 0.93 DDA3937_RS14345 pyridoxal phosphate-dependent aminotransferase low > 74
Pectobacterium carotovorum WPP14 0.83 HER17_RS06425 polyphosphate kinase 1 0.91 HER17_RS07115 pyridoxal phosphate-dependent aminotransferase low > 75
Dickeya dianthicola ME23 0.83 DZA65_RS16045 polyphosphate kinase 1 0.92 DZA65_RS14995 pyridoxal phosphate-dependent aminotransferase low > 75
Dickeya dianthicola 67-19 0.82 HGI48_RS15225 polyphosphate kinase 1 0.92 HGI48_RS14320 pyridoxal phosphate-dependent aminotransferase low > 71
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_03780 polyphosphate kinase 1 0.80 CSW01_09870 pyridoxal phosphate-dependent aminotransferase low > 62
Shewanella sp. ANA-3 0.55 Shewana3_2417 polyphosphate kinase (RefSeq) 0.72 Shewana3_2145 aminotransferase AlaT (RefSeq) low > 73
Shewanella loihica PV-4 0.55 Shew_3079 polyphosphate kinase (RefSeq) 0.72 Shew_1914 aminotransferase AlaT (RefSeq) low > 60
Shewanella amazonensis SB2B 0.55 Sama_2011 polyphosphate kinase (RefSeq) 0.72 Sama_1697 aminotransferase AlaT (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.52 MIT1002_00872 Polyphosphate kinase 0.66 MIT1002_02306 Glutamate-pyruvate aminotransferase AlaA low > 70
Pontibacter actiniarum KMM 6156, DSM 19842 0.38 CA264_15725 polyphosphate kinase 1 0.60 CA264_06065 aminotransferase low > 74
Pseudomonas sp. S08-1 0.29 OH686_13995 polyphosphate kinase 1 0.74 OH686_22575 Alanine transaminase low > 80
Pseudomonas stutzeri RCH2 0.29 Psest_3732 polyphosphate kinase 1 0.73 Psest_1772 Aspartate/tyrosine/aromatic aminotransferase low > 67
Pseudomonas putida KT2440 0.29 PP_5217 Polyphosphate kinase 0.75 PP_1872 glutamate-pyruvate aminotransferase low > 96
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_874 Polyphosphate kinase (EC 2.7.4.1) 0.75 PfGW456L13_2252 Aspartate aminotransferase (EC 2.6.1.1) low > 87
Rhodanobacter denitrificans MT42 0.29 LRK55_RS15755 polyphosphate kinase 1 0.39 LRK55_RS10860 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme low > 63
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS16000 polyphosphate kinase 1 0.38 LRK54_RS11155 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme low > 59
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS29095 polyphosphate kinase 1 0.74 PFLU_RS08510 pyridoxal phosphate-dependent aminotransferase low > 109
Pseudomonas fluorescens SBW25 0.29 PFLU_RS29095 polyphosphate kinase 1 0.74 PFLU_RS08510 pyridoxal phosphate-dependent aminotransferase low > 109
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_08885 polyphosphate kinase 0.74 AO353_19150 aminotransferase low > 101
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_2208 Polyphosphate kinase (EC 2.7.4.1) 0.74 Pf1N1B4_261 Aspartate aminotransferase (EC 2.6.1.1) low > 87
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_0293 Polyphosphate kinase 0.73 Psyr_3615 Aminotransferase, class I and II low > 86
Pseudomonas simiae WCS417 0.29 PS417_27435 polyphosphate kinase 0.74 PS417_08560 aminotransferase low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_0293 Polyphosphate kinase 0.73 Psyr_3615 Aminotransferase, class I and II low > 86
Dyella japonica UNC79MFTsu3.2 0.28 ABZR86_RS07490 polyphosphate kinase 1 0.38 ABZR86_RS12435 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme low > 74
Rhodanobacter sp. FW510-T8 0.28 OKGIIK_08995 ppk1 RNA degradosome polyphosphate kinase 0.39 OKGIIK_12720 aspB aminotransferase low > 52
Pseudomonas sp. RS175 0.28 PFR28_04345 Polyphosphate kinase 0.75 PFR28_00984 Glutamate-pyruvate aminotransferase AlaA low > 88
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_4453 Polyphosphate kinase (EC 2.7.4.1) 0.75 Pf6N2E2_2446 Aspartate aminotransferase (EC 2.6.1.1) low > 103
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_12895 polyphosphate kinase 0.74 AO356_03090 aminotransferase low > 104
Ralstonia sp. UNC404CL21Col 0.28 ABZR87_RS14065 polyphosphate kinase 1 0.67 ABZR87_RS11440 pyridoxal phosphate-dependent aminotransferase low > 80
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS06305 polyphosphate kinase 0.66 HSERO_RS10455 aminotransferase low > 78
Azospirillum brasilense Sp245 0.28 AZOBR_RS16235 polyphosphate kinase 0.18 AZOBR_RS12970 aspartate aminotransferase — —
Magnetospirillum magneticum AMB-1 0.28 AMB_RS14295 RNA degradosome polyphosphate kinase 0.16 AMB_RS02875 pyridoxal phosphate-dependent aminotransferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.28 A4249_RS08195 RNA degradosome polyphosphate kinase 0.20 A4249_RS04680 pyridoxal phosphate-dependent aminotransferase — —
Rhodopseudomonas palustris CGA009 0.27 TX73_015770 RNA degradosome polyphosphate kinase 0.19 TX73_022440 pyridoxal phosphate-dependent aminotransferase — —
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_01782 polyphosphate kinase 1 0.18 CCNA_01603 aspartate aminotransferase low > 67
Caulobacter crescentus NA1000 0.27 CCNA_01782 polyphosphate kinase 1 0.18 CCNA_01603 aspartate aminotransferase low > 66
Sphingomonas koreensis DSMZ 15582 0.27 Ga0059261_0225 polyphosphate kinase 1 0.17 Ga0059261_2226 Aspartate/tyrosine/aromatic aminotransferase low > 68
Dechlorosoma suillum PS 0.27 Dsui_2814 polyphosphate kinase 1 0.68 Dsui_2908 aspartate/tyrosine/aromatic aminotransferase low > 51
Azospirillum sp. SherDot2 0.27 MPMX19_01149 Polyphosphate kinase 0.19 MPMX19_02392 Aspartate/prephenate aminotransferase low > 112
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS13435 polyphosphate kinase 0.67 RR42_RS12545 aminotransferase low > 128
Rhizobium sp. OAE497 0.27 ABIE40_RS06575 RNA degradosome polyphosphate kinase 0.18 ABIE40_RS12925 pyridoxal phosphate-dependent aminotransferase low > 107
Acinetobacter radioresistens SK82 0.27 MPMX26_02335 Polyphosphate kinase 0.67 MPMX26_01871 Glutamate-pyruvate aminotransferase AlaA 0.70 28
Ralstonia solanacearum GMI1000 0.27 RS_RS07705 polyphosphate kinase 1 0.67 RS_RS06650 pyridoxal phosphate-dependent aminotransferase low > 80
Ralstonia solanacearum PSI07 0.27 RPSI07_RS15330 polyphosphate kinase 1 0.66 RPSI07_RS17495 pyridoxal phosphate-dependent aminotransferase low > 81
Ralstonia solanacearum IBSBF1503 0.26 RALBFv3_RS02115 polyphosphate kinase 1 0.66 RALBFv3_RS15870 pyridoxal phosphate-dependent aminotransferase low > 76
Paraburkholderia sabiae LMG 24235 0.26 QEN71_RS04860 polyphosphate kinase 1 0.65 QEN71_RS22410 pyridoxal phosphate-dependent aminotransferase low > 153
Ralstonia solanacearum UW163 0.26 UW163_RS15425 polyphosphate kinase 1 0.66 UW163_RS13315 pyridoxal phosphate-dependent aminotransferase — —
Burkholderia phytofirmans PsJN 0.26 BPHYT_RS14110 polyphosphate kinase 0.66 BPHYT_RS08950 aminotransferase low > 109
Paraburkholderia graminis OAS925 0.26 ABIE53_002988 polyphosphate kinase 0.64 ABIE53_002025 alanine-synthesizing transaminase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.26 H281DRAFT_04418 polyphosphate kinase 0.64 H281DRAFT_00809 alanine-synthesizing transaminase low > 103
Xanthomonas campestris pv. campestris strain 8004 0.26 Xcc-8004.4064.1 Polyphosphate kinase (EC 2.7.4.1) 0.39 Xcc-8004.1010.1 Aspartate aminotransferase (EC 2.6.1.1) low > 74
Lysobacter sp. OAE881 0.26 ABIE51_RS14230 polyphosphate kinase 1 0.43 ABIE51_RS18840 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme low > 62
Bifidobacterium breve UCC2003 0.26 BBR_RS19645 RNA degradosome polyphosphate kinase 0.62 BBR_RS15560 aminotransferase class V-fold PLP-dependent enzyme low > 34
Marinobacter adhaerens HP15 0.25 HP15_3334 polyphosphate kinase 0.68 HP15_2095 aspartate aminotransferase 0.73 11
Mycobacterium tuberculosis H37Rv 0.25 Rv2984 Polyphosphate kinase PPK (polyphosphoric acid kinase) (ATP-polyphosphate phosphotransferase) 0.63 Rv0337c Probable aspartate aminotransferase AspC (transaminase A) (ASPAT) — —
Acidovorax sp. GW101-3H11 0.25 Ac3H11_452 Polyphosphate kinase (EC 2.7.4.1) 0.66 Ac3H11_1508 Aspartate aminotransferase (EC 2.6.1.1) low > 79
Variovorax sp. SCN45 0.25 GFF1089 Polyphosphate kinase (EC 2.7.4.1) 0.64 GFF2803 Alanine transaminase (EC 2.6.1.2) low > 127
Variovorax sp. OAS795 0.24 ABID97_RS14575 polyphosphate kinase 1 0.66 ABID97_RS10885 pyridoxal phosphate-dependent aminotransferase low > 91
Dinoroseobacter shibae DFL-12 0.24 Dshi_0740 Polyphosphate kinase (RefSeq) 0.17 Dshi_0762 aminotransferase class I and II (RefSeq) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF4226 Polyphosphate kinase (EC 2.7.4.1) 0.65 GFF3934 Aspartate aminotransferase (EC 2.6.1.1) low > 90

Not shown: 16 genomes with orthologs for OKFHMN_21800 only; 2 genomes with orthologs for OKFHMN_22825 only