Conservation of cofitness between HER17_RS17265 and HER17_RS05455 in Pectobacterium carotovorum WPP14

80 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS17265 oxygen-dependent coproporphyrinogen oxidase 1.0 HER17_RS05455 hydroxyacylglutathione hydrolase 0.91 12
Dickeya dadantii 3937 0.81 DDA3937_RS04365 oxygen-dependent coproporphyrinogen oxidase 0.68 DDA3937_RS16060 hydroxyacylglutathione hydrolase
Rahnella sp. WP5 0.80 EX31_RS20260 oxygen-dependent coproporphyrinogen oxidase 0.57 EX31_RS21200 hydroxyacylglutathione hydrolase low > 89
Dickeya dianthicola 67-19 0.80 HGI48_RS04355 oxygen-dependent coproporphyrinogen oxidase 0.64 HGI48_RS16180 hydroxyacylglutathione hydrolase low > 71
Dickeya dianthicola ME23 0.79 DZA65_RS04275 oxygen-dependent coproporphyrinogen oxidase 0.64 DZA65_RS17265 hydroxyacylglutathione hydrolase
Serratia liquefaciens MT49 0.78 IAI46_18545 oxygen-dependent coproporphyrinogen oxidase 0.59 IAI46_04135 hydroxyacylglutathione hydrolase low > 86
Pantoea sp. MT58 0.76 IAI47_05360 oxygen-dependent coproporphyrinogen oxidase 0.58 IAI47_15340 hydroxyacylglutathione hydrolase
Erwinia tracheiphila SCR3 0.75 LU632_RS06720 hemF oxygen-dependent coproporphyrinogen oxidase 0.59 LU632_RS01080 gloB hydroxyacylglutathione hydrolase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF2066 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.58 GFF4044 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) low > 78
Escherichia coli ECRC62 0.73 BNILDI_12640 hemF oxygen-dependent coproporphyrinogen oxidase 0.54 BNILDI_09345 gloB hydroxyacylglutathione hydrolase low > 75
Escherichia coli ECOR27 0.73 NOLOHH_13775 hemF oxygen-dependent coproporphyrinogen oxidase 0.54 NOLOHH_02325 gloB hydroxyacylglutathione hydrolase low > 75
Escherichia coli Nissle 1917 0.73 ECOLIN_RS13965 oxygen-dependent coproporphyrinogen oxidase 0.54 ECOLIN_RS01160 hydroxyacylglutathione hydrolase low > 55
Escherichia coli BL21 0.73 ECD_02336 coproporphyrinogen III oxidase 0.54 ECD_00205 hydroxyacylglutathione hydrolase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_01286 Oxygen-dependent coproporphyrinogen-III oxidase 0.54 OHPLBJKB_03449 Hydroxyacylglutathione hydrolase GloB low > 73
Escherichia coli BW25113 0.73 b2436 hemF coproporphyrinogen III oxidase (NCBI) 0.54 b0212 gloB predicted hydroxyacylglutathione hydrolase (NCBI) low > 76
Escherichia coli ECOR38 0.73 HEPCGN_21270 hemF oxygen-dependent coproporphyrinogen oxidase 0.54 HEPCGN_07920 gloB hydroxyacylglutathione hydrolase low > 87
Enterobacter sp. TBS_079 0.72 MPMX20_03323 Oxygen-dependent coproporphyrinogen-III oxidase 0.60 MPMX20_00897 Hydroxyacylglutathione hydrolase GloB low > 85
Shewanella loihica PV-4 0.72 Shew_3729 coproporphyrinogen III oxidase (RefSeq) 0.40 Shew_2114 hydroxyacylglutathione hydrolase (RefSeq) low > 60
Enterobacter asburiae PDN3 0.72 EX28DRAFT_0199 coproporphyrinogen oxidase (EC 1.3.3.3) 0.60 EX28DRAFT_2682 hydroxyacylglutathione hydrolase low > 76
Escherichia fergusonii Becca 0.72 EFB2_01443 Oxygen-dependent coproporphyrinogen-III oxidase 0.55 EFB2_03831 Hydroxyacylglutathione hydrolase GloB low > 86
Escherichia coli ECRC100 0.71 OKFHMN_22095 hemF oxygen-dependent coproporphyrinogen oxidase 0.54 OKFHMN_09980 gloB hydroxyacylglutathione hydrolase low > 80
Escherichia coli ECRC98 0.71 JDDGAC_26045 hemF oxygen-dependent coproporphyrinogen oxidase 0.54 JDDGAC_13575 gloB hydroxyacylglutathione hydrolase low > 86
Escherichia coli ECRC102 0.71 NIAGMN_19865 hemF oxygen-dependent coproporphyrinogen oxidase 0.54 NIAGMN_07830 gloB hydroxyacylglutathione hydrolase
Escherichia coli ECRC101 0.71 MCAODC_12625 hemF oxygen-dependent coproporphyrinogen oxidase 0.54 MCAODC_00495 gloB hydroxyacylglutathione hydrolase low > 87
Escherichia coli ECRC99 0.71 KEDOAH_06125 hemF oxygen-dependent coproporphyrinogen oxidase 0.54 KEDOAH_18175 gloB hydroxyacylglutathione hydrolase
Shewanella sp. ANA-3 0.71 Shewana3_0041 coproporphyrinogen III oxidase (RefSeq) 0.40 Shewana3_2369 beta-lactamase domain-containing protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.71 SO0038 hemF coproporphyrinogen III oxidase, aerobic (NCBI ptt file) 0.40 SO2563 metallo-beta-lactamase family protein (NCBI ptt file) low > 76
Klebsiella michiganensis M5al 0.70 BWI76_RS20740 coproporphyrinogen III oxidase 0.56 BWI76_RS05440 hydroxyacylglutathione hydrolase low > 92
Shewanella amazonensis SB2B 0.69 Sama_0050 coproporphyrinogen III oxidase (RefSeq) 0.39 Sama_1884 hydroxyacylglutathione hydrolase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.69 MIT1002_00026 Coproporphyrinogen-III oxidase, aerobic 0.43 MIT1002_02494 Hydroxyacylglutathione hydrolase
Pseudomonas stutzeri RCH2 0.67 Psest_0028 Coproporphyrinogen III oxidase 0.39 Psest_2071 hydroxyacylglutathione hydrolase low > 67
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_1907 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.41 Pf1N1B4_4596 Hydroxyacylglutathione hydrolase (EC 3.1.2.6)
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_645 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.39 PfGW456L13_3340 Hydroxyacylglutathione hydrolase (EC 3.1.2.6)
Pseudomonas sp. RS175 0.66 PFR28_04656 Oxygen-dependent coproporphyrinogen-III oxidase 0.40 PFR28_01552 Hydroxyacylglutathione hydrolase GloB
Pseudomonas putida KT2440 0.66 PP_0073 Coproporphyrinogen-III oxidase, aerobic 0.43 PP_4144 Hydroxyacylglutathione hydrolase
Pseudomonas fluorescens FW300-N2E3 0.66 AO353_10665 coproporphyrinogen III oxidase 0.43 AO353_23490 hydroxyacylglutathione hydrolase
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_0024 coproporphyrinogen oxidase 0.44 Psyr_1761 Hydroxyacylglutathione hydrolase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_0024 coproporphyrinogen oxidase 0.44 Psyr_1761 Hydroxyacylglutathione hydrolase
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_00275 coproporphyrinogen III oxidase 0.47 CSW01_11395 hydroxyacylglutathione hydrolase
Pseudomonas fluorescens FW300-N2E2 0.66 Pf6N2E2_4129 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.40 Pf6N2E2_587 Hydroxyacylglutathione hydrolase (EC 3.1.2.6)
Pseudomonas sp. S08-1 0.66 OH686_12490 Coproporphyrinogen III oxidase, aerobic 0.42 OH686_03580 hydroxyacylglutathione hydrolase
Pseudomonas fluorescens FW300-N2C3 0.66 AO356_11310 coproporphyrinogen III oxidase 0.41 AO356_24480 hydroxyacylglutathione hydrolase
Dyella japonica UNC79MFTsu3.2 0.65 ABZR86_RS13525 oxygen-dependent coproporphyrinogen oxidase 0.47 ABZR86_RS07285 hydroxyacylglutathione hydrolase
Rhodanobacter sp. FW510-T8 0.65 OKGIIK_16050 hemF oxygen-dependent coproporphyrinogen oxidase 0.40 OKGIIK_08000 gloB hydroxyacylglutathione hydrolase
Rhodanobacter denitrificans MT42 0.65 LRK55_RS09455 oxygen-dependent coproporphyrinogen oxidase 0.42 LRK55_RS16490 hydroxyacylglutathione hydrolase low > 63
Pseudomonas fluorescens SBW25 0.65 PFLU_RS00115 oxygen-dependent coproporphyrinogen oxidase 0.41 PFLU_RS12910 hydroxyacylglutathione hydrolase
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS00115 oxygen-dependent coproporphyrinogen oxidase 0.41 PFLU_RS12910 hydroxyacylglutathione hydrolase
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS09795 oxygen-dependent coproporphyrinogen oxidase 0.42 LRK54_RS16765 hydroxyacylglutathione hydrolase
Pseudomonas simiae WCS417 0.64 PS417_00120 coproporphyrinogen III oxidase 0.41 PS417_12220 hydroxyacylglutathione hydrolase
Kangiella aquimarina DSM 16071 0.64 B158DRAFT_0404 coproporphyrinogen oxidase (EC 1.3.3.3) 0.36 B158DRAFT_1061 hydroxyacylglutathione hydrolase
Dechlorosoma suillum PS 0.63 Dsui_1597 coproporphyrinogen III oxidase 0.38 Dsui_2484 hydroxyacylglutathione hydrolase
Ralstonia solanacearum PSI07 0.62 RPSI07_RS13675 oxygen-dependent coproporphyrinogen oxidase 0.40 RPSI07_RS15230 hydroxyacylglutathione hydrolase
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS17765 coproporphyrinogen III oxidase 0.40 HSERO_RS17120 hydroxyacylglutathione hydrolase
Burkholderia phytofirmans PsJN 0.62 BPHYT_RS06400 oxygen-dependent coproporphyrinogen-III oxidase 0.40 BPHYT_RS14210 hydroxyacylglutathione hydrolase 0.38 95
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS24405 oxygen-dependent coproporphyrinogen oxidase 0.42 QEN71_RS04760 hydroxyacylglutathione hydrolase
Paraburkholderia graminis OAS925 0.62 ABIE53_001544 coproporphyrinogen III oxidase 0.41 ABIE53_003007 hydroxyacylglutathione hydrolase low > 113
Xanthomonas campestris pv. campestris strain 8004 0.62 Xcc-8004.5101.1 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.45 Xcc-8004.4036.1 Hydroxyacylglutathione hydrolase (EC 3.1.2.6)
Ralstonia solanacearum UW163 0.62 UW163_RS10120 coproporphyrinogen III oxidase 0.40 UW163_RS15525 hydroxyacylglutathione hydrolase
Ralstonia solanacearum IBSBF1503 0.62 RALBFv3_RS03550 coproporphyrinogen III oxidase 0.40 RALBFv3_RS02215 hydroxyacylglutathione hydrolase
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_04520 coproporphyrinogen oxidase 0.40 H281DRAFT_04399 hydroxyacylglutathione hydrolase
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS15415 oxygen-dependent coproporphyrinogen oxidase 0.39 ABZR87_RS14165 hydroxyacylglutathione hydrolase
Ralstonia solanacearum GMI1000 0.62 RS_RS11000 coproporphyrinogen III oxidase 0.40 RS_RS07605 hydroxyacylglutathione hydrolase
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS04725 coproporphyrinogen III oxidase 0.38 RR42_RS13570 hydroxyacylglutathione hydrolase
Lysobacter sp. OAE881 0.61 ABIE51_RS02020 oxygen-dependent coproporphyrinogen oxidase 0.42 ABIE51_RS14105 hydroxyacylglutathione hydrolase
Variovorax sp. OAS795 0.59 ABID97_RS16730 oxygen-dependent coproporphyrinogen oxidase 0.42 ABID97_RS14730 hydroxyacylglutathione hydrolase
Variovorax sp. SCN45 0.59 GFF301 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.42 GFF1118 Hydroxyacylglutathione hydrolase (EC 3.1.2.6)
Acidovorax sp. GW101-3H11 0.59 Ac3H11_2420 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.43 Ac3H11_478 Hydroxyacylglutathione hydrolase (EC 3.1.2.6)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.58 GFF4526 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.43 GFF4257 Hydroxyacylglutathione hydrolase (EC 3.1.2.6)
Acinetobacter radioresistens SK82 0.58 MPMX26_02746 Oxygen-dependent coproporphyrinogen-III oxidase 0.32 MPMX26_01139 Hydroxyacylglutathione hydrolase GloB
Castellaniella sp019104865 MT123 0.58 ABCV34_RS02545 oxygen-dependent coproporphyrinogen oxidase 0.41 ABCV34_RS10485 hydroxyacylglutathione hydrolase low > 48
Synechococcus elongatus PCC 7942 0.50 Synpcc7942_0674 hemF coproporphyrinogen III oxidase 0.42 Synpcc7942_1403 Hydroxyacylglutathione hydrolase
Azospirillum sp. SherDot2 0.34 MPMX19_05010 Oxygen-dependent coproporphyrinogen-III oxidase 0.39 MPMX19_06029 Hydroxyacylglutathione hydrolase GloB
Phaeobacter inhibens DSM 17395 0.33 PGA1_c29970 coproporphyrinogen 3 oxidase, aerobic 0.34 PGA1_c25140 hydroxyacylglutathione hydrolase GloB
Bosea sp. OAE506 0.33 ABIE41_RS11175 oxygen-dependent coproporphyrinogen oxidase 0.19 ABIE41_RS06025 hydroxyacylglutathione hydrolase
Caulobacter crescentus NA1000 Δfur 0.32 CCNA_00540 coproporphyrinogen III oxidase 0.28 CCNA_00553 hydroxyacylglutathione hydrolase
Caulobacter crescentus NA1000 0.32 CCNA_00540 coproporphyrinogen III oxidase 0.28 CCNA_00553 hydroxyacylglutathione hydrolase
Rhodopseudomonas palustris CGA009 0.32 TX73_007780 oxygen-dependent coproporphyrinogen oxidase 0.31 TX73_003155 hydroxyacylglutathione hydrolase low > 86
Sinorhizobium meliloti 1021 0.31 SMc00180 coproporphyrinogen III oxidase 0.32 SMc00708 hydroxyacylglutathione hydrolase (glyoxalase II) (GLX II) protein
Agrobacterium fabrum C58 0.30 Atu2247 coproporphyrinogen III oxidase 0.30 Atu3614 glyoxalase II
Rhizobium sp. OAE497 0.30 ABIE40_RS13225 oxygen-dependent coproporphyrinogen oxidase 0.29 ABIE40_RS17605 hydroxyacylglutathione hydrolase
Sphingomonas koreensis DSMZ 15582 0.29 Ga0059261_3217 coproporphyrinogen oxidase (EC 1.3.3.3) 0.35 Ga0059261_2759 hydroxyacylglutathione hydrolase

Not shown: 4 genomes with orthologs for HER17_RS17265 only; 6 genomes with orthologs for HER17_RS05455 only