Conservation of cofitness between HEPCGN_20895 and HEPCGN_14700 in Escherichia coli ECOR38

77 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_20895 xseA exodeoxyribonuclease VII large subunit 1.0 HEPCGN_14700 aldB aldehyde dehydrogenase AldB 0.50 6
Escherichia coli Nissle 1917 0.95 ECOLIN_RS14245 exodeoxyribonuclease VII large subunit 1.00 ECOLIN_RS26555 aldehyde dehydrogenase AldB — —
Escherichia fergusonii Becca 0.94 EFB2_01384 Exodeoxyribonuclease 7 large subunit 1.00 EFB2_00222 Aldehyde dehydrogenase B low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.93 OHPLBJKB_01200 Exodeoxyribonuclease 7 large subunit 1.00 OHPLBJKB_00115 Aldehyde dehydrogenase B low > 73
Escherichia coli ECRC62 0.93 BNILDI_12205 xseA exodeoxyribonuclease VII large subunit 1.00 BNILDI_03775 aldB aldehyde dehydrogenase AldB low > 75
Escherichia coli ECOR27 0.92 NOLOHH_13405 xseA exodeoxyribonuclease VII large subunit 1.00 NOLOHH_07755 aldB aldehyde dehydrogenase AldB low > 75
Escherichia coli BW25113 0.92 b2509 xseA exodeoxyribonuclease VII large subunit (NCBI) 0.99 b3588 aldB aldehyde dehydrogenase B (lactaldehyde dehydrogenase) (VIMSS) low > 76
Escherichia coli BL21 0.92 ECD_02401 exonuclease VII, large subunit 0.99 ECD_03443 aldehyde dehydrogenase B low > 61
Escherichia coli ECRC98 0.91 JDDGAC_25430 xseA exodeoxyribonuclease VII large subunit 0.99 JDDGAC_19495 aldB aldehyde dehydrogenase AldB low > 86
Escherichia coli ECRC100 0.91 OKFHMN_21755 xseA exodeoxyribonuclease VII large subunit 0.99 OKFHMN_15865 aldB aldehyde dehydrogenase AldB low > 80
Escherichia coli ECRC102 0.91 NIAGMN_19525 xseA exodeoxyribonuclease VII large subunit 0.99 NIAGMN_13625 aldB aldehyde dehydrogenase AldB — —
Escherichia coli ECRC99 0.91 KEDOAH_06465 xseA exodeoxyribonuclease VII large subunit 0.99 KEDOAH_12285 aldB aldehyde dehydrogenase AldB — —
Escherichia coli ECRC101 0.91 MCAODC_12285 xseA exodeoxyribonuclease VII large subunit 0.99 MCAODC_06380 aldB aldehyde dehydrogenase AldB low > 87
Enterobacter asburiae PDN3 0.89 EX28DRAFT_0138 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) 0.96 EX28DRAFT_3843 NAD-dependent aldehyde dehydrogenases low > 76
Enterobacter sp. TBS_079 0.88 MPMX20_03383 Exodeoxyribonuclease 7 large subunit 0.95 MPMX20_00142 Aldehyde dehydrogenase B low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF2159 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) 0.97 GFF423 Aldehyde dehydrogenase B (EC 1.2.1.22) — —
Klebsiella michiganensis M5al 0.86 BWI76_RS21035 exodeoxyribonuclease VII large subunit 0.66 BWI76_RS21985 acetaldehyde dehydrogenase (EC 1.2.1.3) (from data) low > 92
Dickeya dadantii 3937 0.73 DDA3937_RS15425 exodeoxyribonuclease VII large subunit 0.83 DDA3937_RS20950 aldehyde dehydrogenase low > 74
Dickeya dianthicola 67-19 0.73 HGI48_RS15540 exodeoxyribonuclease VII large subunit 0.84 HGI48_RS00300 aldehyde dehydrogenase low > 71
Dickeya dianthicola ME23 0.73 DZA65_RS16615 exodeoxyribonuclease VII large subunit 0.84 DZA65_RS00295 aldehyde dehydrogenase low > 75
Rahnella sp. WP5 0.72 EX31_RS20455 exodeoxyribonuclease VII large subunit 0.85 EX31_RS05750 aldehyde dehydrogenase low > 89
Serratia liquefaciens MT49 0.72 IAI46_19215 exodeoxyribonuclease VII large subunit 0.64 IAI46_12315 aldehyde dehydrogenase low > 86
Pectobacterium carotovorum WPP14 0.70 HER17_RS06150 exodeoxyribonuclease VII large subunit 0.84 HER17_RS21100 aldehyde dehydrogenase low > 75
Pantoea sp. MT58 0.69 IAI47_05100 exodeoxyribonuclease VII large subunit 0.62 IAI47_11705 aldehyde dehydrogenase low > 76
Vibrio cholerae E7946 ATCC 55056 0.54 CSW01_03975 exodeoxyribonuclease VII large subunit 0.67 CSW01_09120 aldehyde dehydrogenase low > 62
Shewanella loihica PV-4 0.49 Shew_1296 xseA exodeoxyribonuclease VII large subunit (RefSeq) 0.68 Shew_3574 aldehyde dehydrogenase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.48 MIT1002_02780 Exodeoxyribonuclease 7 large subunit 0.66 MIT1002_03321 Aldehyde dehydrogenase B low > 70
Shewanella sp. ANA-3 0.48 Shewana3_1234 xseA exodeoxyribonuclease VII large subunit (RefSeq) 0.68 Shewana3_0250 aldehyde dehydrogenase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.48 SO3294 xseA exodeoxyribonuclease VII, large subunit (NCBI ptt file) 0.68 SO4480 aldA aldehyde dehydrogenase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.47 Sama_2360 xseA exodeoxyribonuclease VII large subunit (RefSeq) 0.68 Sama_3435 aldehyde dehydrogenase (RefSeq) low > 62
Marinobacter adhaerens HP15 0.45 HP15_2052 exodeoxyribonuclease VII large subunit 0.69 HP15_3144 Aldehyde dehydrogenase (EC 1.2.1.3) (from data) low > 73
Kangiella aquimarina DSM 16071 0.41 B158DRAFT_1157 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) 0.35 B158DRAFT_0025 NAD-dependent aldehyde dehydrogenases low > 40
Rhodanobacter denitrificans MT42 0.41 LRK55_RS17410 exodeoxyribonuclease VII large subunit 0.30 LRK55_RS02330 aldehyde dehydrogenase low > 63
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS24755 exodeoxyribonuclease VII large subunit 0.65 PFLU_RS26745 aldehyde dehydrogenase 0.18 68
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_06540 exodeoxyribonuclease 0.66 AO356_28025 aldehyde dehydrogenase low > 104
Pseudomonas fluorescens SBW25 0.40 PFLU_RS24755 exodeoxyribonuclease VII large subunit 0.65 PFLU_RS26745 aldehyde dehydrogenase low > 109
Rhodanobacter denitrificans FW104-10B01 0.40 LRK54_RS17185 exodeoxyribonuclease VII large subunit 0.30 LRK54_RS02575 aldehyde dehydrogenase low > 59
Rhodanobacter sp. FW510-T8 0.40 OKGIIK_07700 xseA exodeoxyribonuclease VII large subunit 0.30 OKGIIK_09630 2-hydroxymuconic semialdehyde dehydrogenase low > 52
Pseudomonas simiae WCS417 0.40 PS417_23095 exodeoxyribonuclease 0.66 PS417_24810 aldehyde dehydrogenase low > 88
Pseudomonas sp. RS175 0.40 PFR28_00307 Exodeoxyribonuclease 7 large subunit 0.66 PFR28_01819 Aldehyde dehydrogenase low > 88
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_3168 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) 0.66 Pf6N2E2_1381 Aldehyde dehydrogenase (EC 1.2.1.3) low > 103
Pseudomonas stutzeri RCH2 0.39 Psest_1284 exodeoxyribonuclease VII, large subunit 0.66 Psest_2276 Aldehyde dehydrogenase (EC 1.2.1.3) (from data) low > 67
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_1259 Exodeoxyribonuclease VII large subunit 0.65 Psyr_0629 Aldehyde dehydrogenase (NAD+) low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_1259 Exodeoxyribonuclease VII large subunit 0.65 Psyr_0629 Aldehyde dehydrogenase (NAD+) low > 86
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_15935 exodeoxyribonuclease 0.65 AO353_22390 aldehyde dehydrogenase low > 101
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_844 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) 0.65 Pf1N1B4_4502 Aldehyde dehydrogenase (EC 1.2.1.3) — —
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_4851 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) 0.65 PfGW456L13_3517 Aldehyde dehydrogenase (EC 1.2.1.3) low > 87
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.2251.1 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) 0.71 Xcc-8004.135.1 Aldehyde dehydrogenase (EC 1.2.1.3) low > 74
Pseudomonas putida KT2440 0.38 PP_1027 Exodeoxyribonuclease 7 large subunit 0.66 PP_0545 aldehyde dehydrogenase low > 96
Dechlorosoma suillum PS 0.37 Dsui_3268 exodeoxyribonuclease VII, large subunit 0.65 Dsui_1464 NAD-dependent aldehyde dehydrogenase 0.47 27
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS00710 exodeoxyribonuclease VII large subunit 0.65 ABZR87_RS15990 aldehyde dehydrogenase family protein low > 80
Herbaspirillum seropedicae SmR1 0.36 HSERO_RS05850 exodeoxyribonuclease VII large subunit 0.69 HSERO_RS09465 aldehyde dehydrogenase low > 78
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS02835 exodeoxyribonuclease VII large subunit 0.71 QEN71_RS00050 aldehyde dehydrogenase family protein low > 153
Ralstonia solanacearum UW163 0.36 UW163_RS08565 exodeoxyribonuclease VII large subunit 0.65 UW163_RS05810 aldehyde dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS05060 exodeoxyribonuclease VII large subunit 0.65 RALBFv3_RS07815 aldehyde dehydrogenase low > 76
Ralstonia solanacearum GMI1000 0.36 RS_RS12670 exodeoxyribonuclease VII large subunit 0.64 RS_RS15715 aldehyde dehydrogenase low > 80
Paraburkholderia graminis OAS925 0.35 ABIE53_003344 exodeoxyribonuclease VII large subunit 0.71 ABIE53_000363 aldehyde dehydrogenase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_04109 Exodeoxyribonuclease VII large subunit 0.71 H281DRAFT_02299 aldehyde dehydrogenase low > 103
Ralstonia solanacearum PSI07 0.35 RPSI07_RS12235 exodeoxyribonuclease VII large subunit 0.65 RPSI07_RS09465 aldehyde dehydrogenase low > 81
Burkholderia phytofirmans PsJN 0.35 BPHYT_RS15865 exodeoxyribonuclease VII large subunit 0.71 BPHYT_RS00120 aldehyde dehydrogenase low > 109
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS03475 exodeoxyribonuclease VII large subunit 0.71 RR42_RS34255 aldehyde dehydrogenase low > 128
Variovorax sp. OAS795 0.34 ABID97_RS16945 exodeoxyribonuclease VII large subunit 0.70 ABID97_RS15020 aldehyde dehydrogenase low > 91
Castellaniella sp019104865 MT123 0.34 ABCV34_RS05330 exodeoxyribonuclease VII large subunit 0.69 ABCV34_RS02705 aldehyde dehydrogenase family protein low > 48
Variovorax sp. SCN45 0.33 GFF349 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) 0.74 GFF6442 Aldehyde dehydrogenase (EC 1.2.1.3) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF4511 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) 0.68 GFF5395 Aldehyde dehydrogenase (EC 1.2.1.3) low > 90
Acidovorax sp. GW101-3H11 0.31 Ac3H11_2382 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) 0.66 Ac3H11_4393 Aldehyde dehydrogenase (EC 1.2.1.3) low > 79
Sinorhizobium meliloti 1021 0.27 SMc00378 exodeoxyribonuclease VII large subunit 0.73 SMc02689 aldehyde dehydrogenase low > 103
Rhizobium sp. OAE497 0.27 ABIE40_RS01205 exodeoxyribonuclease VII large subunit 0.71 ABIE40_RS25730 aldehyde dehydrogenase low > 107
Azospirillum sp. SherDot2 0.27 MPMX19_01631 Exodeoxyribonuclease 7 large subunit 0.71 MPMX19_05663 Aldehyde dehydrogenase low > 112
Caulobacter crescentus NA1000 0.26 CCNA_02329 exodeoxyribonuclease VII large subunit 0.70 CCNA_03695 aldehyde dehydrogenase low > 66
Caulobacter crescentus NA1000 Δfur 0.26 CCNA_02329 exodeoxyribonuclease VII large subunit 0.70 CCNA_03695 aldehyde dehydrogenase low > 67
Fusobacterium nucleatum SB010 0.26 HUW76_06820 exodeoxyribonuclease VII large subunit 0.47 HUW76_07885 aldehyde dehydrogenase family protein low > 35
Rhodopseudomonas palustris CGA009 0.26 TX73_005960 exodeoxyribonuclease VII large subunit 0.68 TX73_006195 aldehyde dehydrogenase low > 86
Dinoroseobacter shibae DFL-12 0.24 Dshi_2727 exodeoxyribonuclease VII, large subunit (RefSeq) 0.68 Dshi_1095 aldehyde dehydrogenase (RefSeq) — —
Rhodospirillum rubrum S1H 0.23 Rru_A0159 Exodeoxyribonuclease VII (NCBI) 0.67 Rru_A0931 Aldehyde dehydrogenase (NAD+) (NCBI) low > 58
Synechococcus elongatus PCC 7942 0.19 Synpcc7942_0368 xseA exodeoxyribonuclease VII large subunit 0.14 Synpcc7942_0489 aldA aldehyde dehydrogenase low > 38
Mycobacterium tuberculosis H37Rv 0.19 Rv1108c Probable exodeoxyribonuclease VII (large subunit) XseA (exonuclease VII large subunit) 0.66 Rv0458 Probable aldehyde dehydrogenase low > 58
Pontibacter actiniarum KMM 6156, DSM 19842 0.13 CA264_02365 exodeoxyribonuclease VII large subunit 0.62 CA264_05515 aldehyde dehydrogenase low > 74

Not shown: 19 genomes with orthologs for HEPCGN_20895 only; 5 genomes with orthologs for HEPCGN_14700 only