Conservation of cofitness between PS417_08155 and PS417_04420 in Pseudomonas simiae WCS417

83 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_08155 integration host factor subunit beta 1.0 PS417_04420 histidinol dehydrogenase 0.34 4
Pseudomonas fluorescens SBW25 1.00 PFLU_RS08125 integration host factor subunit beta 0.99 PFLU_RS04470 histidinol dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS08125 integration host factor subunit beta 0.99 PFLU_RS04470 histidinol dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2E3 1.00 AO353_02040 integration host factor subunit beta 0.94 AO353_05110 histidinol dehydrogenase 0.36 13
Pseudomonas syringae pv. syringae B728a ΔmexB 0.99 Psyr_3641 Integration host factor, beta subunit 0.92 Psyr_4133 histidinol dehydrogenase
Pseudomonas syringae pv. syringae B728a 0.99 Psyr_3641 Integration host factor, beta subunit 0.92 Psyr_4133 histidinol dehydrogenase
Pseudomonas fluorescens GW456-L13 0.99 PfGW456L13_2181 Integration host factor beta subunit 0.95 PfGW456L13_5000 Histidinol dehydrogenase (EC 1.1.1.23)
Pseudomonas fluorescens FW300-N1B4 0.99 Pf1N1B4_345 Integration host factor beta subunit 0.95 Pf1N1B4_1066 Histidinol dehydrogenase (EC 1.1.1.23)
Pseudomonas sp. RS175 0.97 PFR28_00913 Integration host factor subunit beta 0.94 PFR28_00187 Histidinol dehydrogenase low > 88
Pseudomonas putida KT2440 0.97 PP_1773 Integration host factor subunit beta 0.91 PP_0966 Histidinol dehydrogenase
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_2515 Integration host factor beta subunit 0.94 Pf6N2E2_3252 Histidinol dehydrogenase (EC 1.1.1.23)
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_03435 integration host factor subunit beta 0.94 AO356_06965 histidinol dehydrogenase 0.49 3
Pseudomonas sp. S08-1 0.93 OH686_20895 integration host factor, beta subunit 0.85 OH686_08470 Histidinol dehydrogenase low > 80
Pseudomonas stutzeri RCH2 0.92 Psest_1805 integration host factor, beta subunit 0.86 Psest_3298 histidinol dehydrogenase low > 67
Kangiella aquimarina DSM 16071 0.76 B158DRAFT_2328 integration host factor, beta subunit 0.27 B158DRAFT_2293 histidinol dehydrogenase
Shewanella sp. ANA-3 0.73 Shewana3_1978 ihfB integration host factor subunit beta (RefSeq) 0.32 Shewana3_1853 hisD histidinol dehydrogenase (RefSeq)
Shewanella loihica PV-4 0.73 Shew_1955 integration host factor, beta subunit (RefSeq) 0.32 Shew_2198 histidinol dehydrogenase (RefSeq)
Shewanella oneidensis MR-1 0.73 SO2401 ihfB integration host factor, beta subunit (NCBI ptt file) 0.32 SO2073 hisD histidinol dehydrogenase (NCBI ptt file)
Shewanella amazonensis SB2B 0.72 Sama_1737 ihfB integration host factor subunit beta (RefSeq) 0.33 Sama_1942 hisD histidinol dehydrogenase (RefSeq) low > 62
Dickeya dadantii 3937 0.72 DDA3937_RS09690 integration host factor subunit beta 0.33 DDA3937_RS09735 histidinol dehydrogenase
Alteromonas macleodii MIT1002 0.71 MIT1002_02188 Integration host factor subunit beta 0.32 MIT1002_02633 Histidinol dehydrogenase low > 70
Dickeya dianthicola 67-19 0.71 HGI48_RS09700 integration host factor subunit beta 0.33 HGI48_RS09745 histidinol dehydrogenase
Dickeya dianthicola ME23 0.71 DZA65_RS10010 integration host factor subunit beta 0.33 DZA65_RS10055 histidinol dehydrogenase
Pectobacterium carotovorum WPP14 0.71 HER17_RS12270 integration host factor subunit beta 0.33 HER17_RS12230 histidinol dehydrogenase
Escherichia coli ECRC98 0.70 JDDGAC_09075 ihfB integration host factor subunit beta 0.33 JDDGAC_28625 hisD Histidinol dehydrogenase
Serratia liquefaciens MT49 0.70 IAI46_08655 integration host factor subunit beta 0.32 IAI46_08210 histidinol dehydrogenase
Rhodanobacter denitrificans FW104-10B01 0.70 LRK54_RS18040 integration host factor subunit beta 0.31 LRK54_RS01605 histidinol dehydrogenase
Rhodanobacter denitrificans MT42 0.70 LRK55_RS17895 integration host factor subunit beta 0.31 LRK55_RS01385 histidinol dehydrogenase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF3669 Integration host factor beta subunit 0.32 GFF3912 Histidinol dehydrogenase (EC 1.1.1.23) low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_02756 Integration host factor subunit beta 0.33 OHPLBJKB_01680 Histidinol dehydrogenase
Escherichia coli ECRC101 0.70 OKFHMN_05465 ihfB integration host factor subunit beta 0.33 OKFHMN_24515 hisD Histidinol dehydrogenase
Escherichia coli ECRC62 0.70 BNILDI_20280 ihfB integration host factor subunit beta 0.32 BNILDI_14740 hisD Histidinol dehydrogenase
Escherichia coli ECOR27 0.70 NOLOHH_22025 ihfB integration host factor subunit beta 0.33 NOLOHH_15830 hisD Histidinol dehydrogenase
Escherichia coli ECRC102 0.70 NIAGMN_03185 ihfB integration host factor subunit beta 0.33 NIAGMN_22460 hisD Histidinol dehydrogenase
Escherichia coli Nissle 1917 0.70 ECOLIN_RS04830 integration host factor subunit beta 0.33 ECOLIN_RS11945 histidinol dehydrogenase
Escherichia coli ECOR38 0.70 HEPCGN_23060 ihfB integration host factor subunit beta 0.33 HEPCGN_03220 hisD Histidinol dehydrogenase
Escherichia coli ECRC101 0.70 MCAODC_24855 ihfB integration host factor subunit beta 0.33 MCAODC_20425 hisD Histidinol dehydrogenase
Escherichia coli ECRC99 0.70 KEDOAH_22270 ihfB integration host factor subunit beta 0.33 KEDOAH_03635 hisD Histidinol dehydrogenase
Escherichia coli BL21 0.70 ECD_00916 integration host factor (IHF), DNA-binding protein, beta subunit 0.33 ECD_01922 bifunctional histidinal dehydrogenase/ histidinol dehydrogenase
Escherichia coli BW25113 0.70 b0912 ihfB integration host factor subunit beta (NCBI) 0.33 b2020 hisD histidinol dehydrogenase (NCBI) 0.43 33
Escherichia fergusonii Becca 0.70 EFB2_03152 Integration host factor subunit beta 0.33 EFB2_01836 Histidinol dehydrogenase
Klebsiella michiganensis M5al 0.70 BWI76_RS09785 integration host factor subunit beta 0.32 BWI76_RS18925 histidinol dehydrogenase
Enterobacter asburiae PDN3 0.69 EX28DRAFT_2024 integration host factor, beta subunit 0.32 EX28DRAFT_0539 histidinol dehydrogenase
Rahnella sp. WP5 0.69 EX31_RS18235 integration host factor subunit beta 0.33 EX31_RS11440 histidinol dehydrogenase
Enterobacter sp. TBS_079 0.69 MPMX20_01570 Integration host factor subunit beta 0.32 MPMX20_03002 Histidinol dehydrogenase low > 85
Marinobacter adhaerens HP15 0.69 HP15_1367 integration host factor, beta subunit 0.70 HP15_2428 histidinol dehydrogenase
Rhodanobacter sp. FW510-T8 0.69 OKGIIK_07260 ihfB integration host factor subunit beta 0.31 OKGIIK_04950 hisD histidinol dehydrogenase
Vibrio cholerae E7946 ATCC 55056 0.68 CSW01_09575 integration host factor subunit beta 0.34 CSW01_05750 histidinol dehydrogenase
Xanthomonas campestris pv. campestris strain 8004 0.68 Xcc-8004.2382.1 Integration host factor beta subunit 0.34 Xcc-8004.2948.1 Histidinol dehydrogenase (EC 1.1.1.23)
Dyella japonica UNC79MFTsu3.2 0.67 ABZR86_RS05560 integration host factor subunit beta 0.31 ABZR86_RS06730 histidinol dehydrogenase
Erwinia tracheiphila SCR3 0.67 LU632_RS09810 ihfB integration host factor subunit beta 0.32 LU632_RS08945 hisD histidinol dehydrogenase
Pantoea sp. MT58 0.67 IAI47_12845 integration host factor subunit beta 0.32 IAI47_07090 histidinol dehydrogenase
Lysobacter sp. OAE881 0.66 ABIE51_RS09350 integration host factor subunit beta 0.32 ABIE51_RS13325 histidinol dehydrogenase
Acinetobacter radioresistens SK82 0.59 MPMX26_01237 Integration host factor subunit beta 0.58 MPMX26_02587 Histidinol dehydrogenase low > 36
Dechlorosoma suillum PS 0.59 Dsui_1944 integration host factor, beta subunit 0.63 Dsui_1411 histidinol dehydrogenase
Castellaniella sp019104865 MT123 0.58 ABCV34_RS07085 integration host factor subunit beta 0.57 ABCV34_RS11230 histidinol dehydrogenase
Herbaspirillum seropedicae SmR1 0.57 HSERO_RS18405 integration host factor subunit beta 0.63 HSERO_RS20345 histidinol dehydrogenase
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_03919 integration host factor subunit beta 0.61 H281DRAFT_05652 histidinol dehydrogenase
Paraburkholderia graminis OAS925 0.56 ABIE53_003151 integration host factor subunit beta 0.61 ABIE53_003701 histidinol dehydrogenase
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS14880 integration host factor subunit beta 0.61 BPHYT_RS17710 histidinol dehydrogenase
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS04100 integration host factor subunit beta 0.62 QEN71_RS27865 histidinol dehydrogenase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.54 GFF5347 Integration host factor beta subunit 0.62 GFF1314 Histidinol dehydrogenase (EC 1.1.1.23)
Variovorax sp. SCN45 0.54 GFF6178 Integration host factor beta subunit 0.63 GFF5345 Histidinol dehydrogenase (EC 1.1.1.23)
Magnetospirillum magneticum AMB-1 0.53 AMB_RS20265 integration host factor subunit beta 0.46 AMB_RS16905 histidinol dehydrogenase
Variovorax sp. OAS795 0.53 ABID97_RS09495 integration host factor subunit beta 0.63 ABID97_RS23160 histidinol dehydrogenase
Acidovorax sp. GW101-3H11 0.53 Ac3H11_2578 Integration host factor beta subunit 0.63 Ac3H11_4724 Histidinol dehydrogenase (EC 1.1.1.23)
Rhodopseudomonas palustris CGA009 0.51 TX73_000345 integration host factor subunit beta 0.43 TX73_023540 histidinol dehydrogenase
Rhodospirillum rubrum S1H 0.50 Rru_A0292 Integration host factor, beta subunit (NCBI) 0.47 Rru_A2771 Histidinol dehydrogenase (NCBI)
Bosea sp. OAE506 0.50 ABIE41_RS00295 integration host factor subunit beta 0.46 ABIE41_RS24015 histidinol dehydrogenase
Azospirillum sp. SherDot2 0.49 MPMX19_02383 Integration host factor subunit beta 0.45 MPMX19_05543 Histidinol dehydrogenase
Phaeobacter inhibens DSM 17395 0.49 PGA1_c04840 integration host factor subunit beta 0.46 PGA1_c31190 histidinol dehydrogenase HisD
Dinoroseobacter shibae DFL-12 0.48 Dshi_1027 integration host factor, beta subunit (RefSeq) 0.45 Dshi_0979 Histidinol dehydrogenase (RefSeq)
Caulobacter crescentus NA1000 0.47 CCNA_03701 integration host factor beta-subunit 0.39 CCNA_02431 histidinol dehydrogenase low > 66
Caulobacter crescentus NA1000 Δfur 0.47 CCNA_03701 integration host factor beta-subunit 0.39 CCNA_02431 histidinol dehydrogenase low > 67
Agrobacterium fabrum C58 0.47 Atu0338 integration host factor, beta subunit 0.46 Atu0537 histidinol dehydrogenase
Sinorhizobium meliloti 1021 0.47 SMc01134 integration host factor subunit beta 0.48 SMc02307 histidinol dehydrogenase
Rhizobium sp. OAE497 0.47 ABIE40_RS01835 integration host factor subunit beta 0.46 ABIE40_RS02725 histidinol dehydrogenase
Brevundimonas sp. GW460-12-10-14-LB2 0.46 A4249_RS10895 integration host factor subunit beta 0.28 A4249_RS10695 histidinol dehydrogenase
Sphingomonas koreensis DSMZ 15582 0.45 Ga0059261_3896 integration host factor, beta subunit 0.44 Ga0059261_1281 histidinol dehydrogenase low > 68
Desulfovibrio vulgaris Miyazaki F 0.38 DvMF_2799 histone family protein DNA-binding protein (RefSeq) 0.38 DvMF_2814 hisD histidinol dehydrogenase (RefSeq) low > 51
Pontibacter actiniarum KMM 6156, DSM 19842 0.32 CA264_14990 integration host factor subunit beta 0.29 CA264_05030 histidinol dehydrogenase
Echinicola vietnamensis KMM 6221, DSM 17526 0.31 Echvi_1249 Bacterial nucleoid DNA-binding protein 0.29 Echvi_2459 histidinol dehydrogenase
Pedobacter sp. GW460-11-11-14-LB5 0.30 CA265_RS22675 integration host factor subunit beta 0.34 CA265_RS03635 histidinol dehydrogenase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.30 ABZR88_RS20435 HU family DNA-binding protein 0.32 ABZR88_RS06880 histidinol dehydrogenase

Not shown: 1 genomes with orthologs for PS417_08155 only; 18 genomes with orthologs for PS417_04420 only