| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 1.0 | GFF2221 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | 1.0 | GFF55 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | 0.94 | 5 |
| Klebsiella michiganensis M5al | 0.94 | BWI76_RS00390 | | two-component system sensor histidine kinase NtrB | 0.89 | BWI76_RS05200 | | bifunctional uridylyltransferase/uridylyl-removing protein | 0.59 | 19 |
| Escherichia coli BL21 | 0.94 | ECD_03754 | | sensory histidine kinase in two-component regulatory system with GlnG | 0.94 | ECD_00165 | | uridylyltransferase | 0.42 | 9 |
| Escherichia coli ECRC100 | 0.94 | OKFHMN_14105 | glnL | nitrogen regulation protein NR(II) | 0.94 | OKFHMN_10235 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia coli BW25113 | 0.94 | b3869 | glnL | sensory histidine kinase in two-component regulatory system with GlnG (NCBI) | 0.94 | b0167 | glnD | PII uridylyl-transferase (NCBI) | 0.31 | 9 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.94 | OHPLBJKB_04183 | | Sensory histidine kinase/phosphatase NtrB | 0.94 | OHPLBJKB_03497 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | low | > 73 |
| Escherichia coli ECRC102 | 0.94 | NIAGMN_11860 | glnL | nitrogen regulation protein NR(II) | 0.94 | NIAGMN_08085 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia coli ECRC98 | 0.94 | JDDGAC_17730 | glnL | nitrogen regulation protein NR(II) | 0.93 | JDDGAC_13830 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia coli ECRC101 | 0.94 | MCAODC_04605 | glnL | nitrogen regulation protein NR(II) | 0.94 | MCAODC_00750 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia coli ECRC99 | 0.94 | KEDOAH_14045 | glnL | nitrogen regulation protein NR(II) | 0.94 | KEDOAH_17920 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia coli ECRC62 | 0.94 | BNILDI_05295 | glnL | nitrogen regulation protein NR(II) | 0.94 | BNILDI_09090 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 75 |
| Escherichia coli Nissle 1917 | 0.93 | ECOLIN_RS22300 | | nitrogen regulation protein NR(II) | 0.93 | ECOLIN_RS00915 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia coli ECOR38 | 0.93 | HEPCGN_12735 | glnL | nitrogen regulation protein NR(II) | 0.94 | HEPCGN_08185 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia fergusonii Becca | 0.93 | EFB2_04747 | | Sensory histidine kinase/phosphatase NtrB | 0.93 | EFB2_03878 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | — | — |
| Escherichia coli ECOR27 | 0.93 | NOLOHH_06235 | glnL | nitrogen regulation protein NR(II) | 0.94 | NOLOHH_02580 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Enterobacter sp. TBS_079 | 0.92 | MPMX20_04596 | | Sensory histidine kinase/phosphatase NtrB | 0.93 | MPMX20_00851 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | — | — |
| Enterobacter asburiae PDN3 | 0.92 | EX28DRAFT_4351 | | Signal transduction histidine kinase, nitrogen specific | 0.93 | EX28DRAFT_3754 | | UTP--GlnB (protein PII) uridylyltransferase, GlnD | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.90 | LU632_RS22140 | glnL | nitrogen regulation protein NR(II) | 0.76 | LU632_RS19980 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 74 |
| Serratia liquefaciens MT49 | 0.88 | IAI46_24955 | | nitrogen regulation protein NR(II) | 0.79 | IAI46_20270 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 86 |
| Pantoea sp. MT58 | 0.88 | IAI47_00455 | | nitrogen regulation protein NR(II) | 0.78 | IAI47_15540 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 76 |
| Rahnella sp. WP5 | 0.87 | EX31_RS15875 | | nitrogen regulation protein NR(II) | 0.77 | EX31_RS13045 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 89 |
| Dickeya dadantii 3937 | 0.84 | DDA3937_RS00130 | | nitrogen regulation protein NR(II) | 0.76 | DDA3937_RS05105 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.84 | HER17_RS21435 | | nitrogen regulation protein NR(II) | 0.77 | HER17_RS16345 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 75 |
| Dickeya dianthicola ME23 | 0.84 | DZA65_RS22205 | | nitrogen regulation protein NR(II) | 0.76 | DZA65_RS05445 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 75 |
| Dickeya dianthicola 67-19 | 0.84 | HGI48_RS21230 | | nitrogen regulation protein NR(II) | 0.76 | HGI48_RS05105 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 71 |
| Vibrio cholerae E7946 ATCC 55056 | 0.56 | CSW01_13860 | | nitrogen regulation protein NR(II) | 0.51 | CSW01_11520 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 62 |
| Shewanella sp. ANA-3 | 0.48 | Shewana3_0259 | | signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) | 0.43 | Shewana3_2817 | | PII uridylyl-transferase (RefSeq) | 0.96 | 2 |
| Shewanella oneidensis MR-1 | 0.47 | SO4471 | ntrB | nitrogen regulation protein (NCBI ptt file) | 0.43 | SO1626 | glnD | protein-P-II uridylyltransferase (NCBI ptt file) | 0.93 | 2 |
| Shewanella loihica PV-4 | 0.46 | Shew_3560 | | signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) | 0.43 | Shew_2637 | | PII uridylyl-transferase (RefSeq) | 0.79 | 7 |
| Shewanella amazonensis SB2B | 0.46 | Sama_3426 | | nitrogen regulation protein (RefSeq) | 0.45 | Sama_1137 | | PII uridylyl-transferase (RefSeq) | 0.83 | 2 |
| Pseudomonas putida KT2440 | 0.43 | PP_5047 | | two-component system sensory histidine kinase/phosphatase GlnL/GlnG | 0.36 | PP_1589 | | uridylyltransferase | 0.80 | 2 |
| Alteromonas macleodii MIT1002 | 0.43 | MIT1002_03185 | | Nitrogen regulation protein NR(II) | 0.39 | MIT1002_01001 | | PII uridylyl-transferase | 0.80 | 15 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.42 | Psyr_4821 | | PAS/PAC sensor signal transduction histidine kinase | 0.36 | Psyr_1341 | | Protein-P-II uridylyltransferase | 0.64 | 2 |
| Pseudomonas sp. RS175 | 0.42 | PFR28_04945 | | Sensory histidine kinase/phosphatase NtrB | 0.35 | PFR28_00394 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | 0.33 | 39 |
| Pseudomonas syringae pv. syringae B728a | 0.42 | Psyr_4821 | | PAS/PAC sensor signal transduction histidine kinase | 0.36 | Psyr_1341 | | Protein-P-II uridylyltransferase | 0.73 | 1 |
| Pseudomonas fluorescens FW300-N2E2 | 0.42 | Pf6N2E2_3825 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | 0.37 | Pf6N2E2_3072 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | 0.84 | 2 |
| Pseudomonas sp. S08-1 | 0.42 | OH686_10635 | | Nitrogen regulation protein NtrB | 0.36 | OH686_06495 | | protein-P-II uridylyltransferase | low | > 80 |
| Pseudomonas simiae WCS417 | 0.42 | PS417_01640 | | histidine kinase | 0.37 | PS417_06200 | | protein-PII uridylyltransferase | 0.79 | 2 |
| Pseudomonas fluorescens FW300-N2C3 | 0.42 | AO356_09725 | | histidine kinase | 0.37 | AO356_06050 | | protein-PII uridylyltransferase | 0.90 | 2 |
| Pseudomonas fluorescens GW456-L13 | 0.42 | PfGW456L13_346 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | 0.36 | PfGW456L13_4711 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | 0.86 | 2 |
| Pseudomonas fluorescens SBW25-INTG | 0.42 | PFLU_RS01690 | | nitrogen regulation protein NR(II) | 0.36 | PFLU_RS06265 | | [protein-PII] uridylyltransferase | 0.85 | 2 |
| Pseudomonas fluorescens SBW25 | 0.42 | PFLU_RS01690 | | nitrogen regulation protein NR(II) | 0.36 | PFLU_RS06265 | | [protein-PII] uridylyltransferase | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.42 | Pf1N1B4_1610 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | 0.37 | Pf1N1B4_3081 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | 0.67 | 2 |
| Pseudomonas fluorescens FW300-N2E3 | 0.41 | AO353_12150 | | histidine kinase | 0.36 | AO353_16450 | | protein-PII uridylyltransferase | 0.87 | 1 |
| Pseudomonas stutzeri RCH2 | 0.40 | Psest_3931 | | Signal transduction histidine kinase, nitrogen specific | 0.37 | Psest_2845 | | [Protein-PII] uridylyltransferase | 0.89 | 2 |
| Marinobacter adhaerens HP15 | 0.40 | HP15_426 | | signal transduction histidine kinase, nitrogen specific, NtrB | 0.36 | HP15_1163 | | [protein-PII] uridylyltransferase | low | > 73 |
| Dechlorosoma suillum PS | 0.38 | Dsui_1050 | | signal transduction histidine kinase, nitrogen specific | 0.29 | Dsui_2696 | | (protein-PII) uridylyltransferase | 0.47 | 24 |
| Ralstonia solanacearum GMI1000 | 0.37 | RS_RS06315 | | PAS domain-containing sensor histidine kinase | 0.28 | RS_RS07035 | | bifunctional uridylyltransferase/uridylyl-removing protein | — | — |
| Herbaspirillum seropedicae SmR1 | 0.36 | HSERO_RS15685 | | histidine kinase | 0.28 | HSERO_RS10865 | | PII uridylyl-transferase | 0.88 | 2 |
| Ralstonia solanacearum IBSBF1503 | 0.36 | RALBFv3_RS15535 | | PAS domain-containing sensor histidine kinase | 0.27 | RALBFv3_RS00365 | | [protein-PII] uridylyltransferase | — | — |
| Ralstonia solanacearum UW163 | 0.36 | UW163_RS12995 | | PAS domain-containing sensor histidine kinase | 0.27 | UW163_RS13695 | | [protein-PII] uridylyltransferase | — | — |
| Ralstonia solanacearum PSI07 | 0.36 | RPSI07_RS17820 | | PAS domain-containing sensor histidine kinase | 0.28 | RPSI07_RS17110 | | [protein-PII] uridylyltransferase | low | > 81 |
| Acinetobacter radioresistens SK82 | 0.35 | MPMX26_01293 | | Sensory histidine kinase/phosphatase NtrB | 0.34 | MPMX26_01867 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | 0.78 | 5 |
| Acidovorax sp. GW101-3H11 | 0.34 | Ac3H11_4431 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | 0.26 | Ac3H11_537 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | 0.87 | 2 |
| Cupriavidus basilensis FW507-4G11 | 0.34 | RR42_RS12985 | | histidine kinase | 0.26 | RR42_RS11885 | | (protein-PII) uridylyltransferase | 0.94 | 2 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.33 | GFF5270 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | 0.27 | GFF4563 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | low | > 90 |
| Paraburkholderia graminis OAS925 | 0.33 | ABIE53_002805 | | two-component system nitrogen regulation sensor histidine kinase GlnL | 0.28 | ABIE53_002507 | | [protein-PII] uridylyltransferase | 0.50 | 5 |
| Burkholderia phytofirmans PsJN | 0.32 | BPHYT_RS12940 | | signal transduction histidine kinase | 0.28 | BPHYT_RS12150 | | PII uridylyl-transferase | 0.67 | 3 |
| Ralstonia sp. UNC404CL21Col | 0.32 | ABZR87_RS11065 | | nitrogen regulation protein NR(II) | 0.28 | ABZR87_RS11815 | | [protein-PII] uridylyltransferase | 0.85 | 2 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.32 | H281DRAFT_00453 | | two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL | 0.28 | H281DRAFT_00608 | | UTP--GlnB (protein PII) uridylyltransferase, GlnD | 0.48 | 4 |
| Paraburkholderia sabiae LMG 24235 | 0.32 | QEN71_RS05670 | | nitrogen regulation protein NR(II) | 0.28 | QEN71_RS06410 | | [protein-PII] uridylyltransferase | low | > 153 |
| Castellaniella sp019104865 MT123 | 0.29 | ABCV34_RS03535 | | nitrogen regulation protein NR(II) | 0.25 | ABCV34_RS04120 | | [protein-PII] uridylyltransferase | 0.62 | 31 |
| Kangiella aquimarina DSM 16071 | 0.28 | B158DRAFT_0715 | | Signal transduction histidine kinase, nitrogen specific | 0.32 | B158DRAFT_1072 | | UTP--GlnB (protein PII) uridylyltransferase, GlnD | 0.91 | 2 |
| Dyella japonica UNC79MFTsu3.2 | 0.25 | ABZR86_RS15510 | | ATP-binding protein | 0.33 | ABZR86_RS21575 | | [protein-PII] uridylyltransferase | 0.62 | 12 |
| Rhodanobacter sp. FW510-T8 | 0.24 | OKGIIK_14470 | | PAS domain-containing sensor histidine kinase | 0.30 | OKGIIK_10125 | glnD | [protein-PII] uridylyltransferase | low | > 52 |
| Azospirillum sp. SherDot2 | 0.24 | MPMX19_01111 | | Sensory histidine kinase/phosphatase NtrB | 0.22 | MPMX19_00912 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | 0.50 | 4 |
| Magnetospirillum magneticum AMB-1 | 0.24 | AMB_RS11945 | | PAS domain-containing sensor histidine kinase | 0.22 | AMB_RS22650 | | [protein-PII] uridylyltransferase | — | — |
| Rhodospirillum rubrum S1H | 0.24 | Rru_A1677 | | Signal transduction histidine kinase, nitrogen specific, NtrB (NCBI) | 0.21 | Rru_A3539 | | GlnB (protein PII) uridylyltransferase, GlnD (NCBI) | low | > 58 |
| Azospirillum brasilense Sp245 | 0.23 | AZOBR_RS14425 | | ATPase | 0.20 | AZOBR_RS02110 | | protein-PII uridylyltransferase | 0.87 | 1 |
| Agrobacterium fabrum C58 | 0.22 | Atu1445 | | two component sensor kinase | 0.22 | Atu0346 | | uridylyltransferase/uridylyl-removing enzyme UTase | 0.57 | 4 |
| Rhizobium sp. OAE497 | 0.22 | ABIE40_RS09085 | | nitrogen regulation protein NR(II) | 0.21 | ABIE40_RS01765 | | [protein-PII] uridylyltransferase | low | > 107 |
| Bosea sp. OAE506 | 0.22 | ABIE41_RS16790 | | ATP-binding protein | 0.22 | ABIE41_RS00205 | | [protein-PII] uridylyltransferase | low | > 77 |
| Sinorhizobium meliloti 1021 | 0.22 | SMc01042 | | nitrogen regulation protein | 0.21 | SMc01124 | | PII uridylyl-transferase | 0.42 | 8 |
| Rhodanobacter denitrificans FW104-10B01 | 0.22 | LRK54_RS07985 | | ATP-binding protein | 0.31 | LRK54_RS03245 | | [protein-PII] uridylyltransferase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.22 | TX73_013415 | | nitrogen regulation protein NR(II) | 0.21 | TX73_003060 | | [protein-PII] uridylyltransferase | low | > 86 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.22 | Xcc-8004.251.1 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | 0.29 | Xcc-8004.3543.1 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | — | — |
| Rhodanobacter denitrificans MT42 | 0.21 | LRK55_RS07735 | | ATP-binding protein | 0.31 | LRK55_RS02995 | | [protein-PII] uridylyltransferase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.21 | Dshi_1575 | | signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) | 0.21 | Dshi_2833 | | UTP-GlnB uridylyltransferase, GlnD (RefSeq) | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.15 | Ga0059261_0139 | | Signal transduction histidine kinase, nitrogen specific | 0.22 | Ga0059261_2737 | | UTP--GlnB (protein PII) uridylyltransferase, GlnD | 0.75 | 5 |
Not shown: 1 genomes with orthologs for GFF2221 only; 9 genomes with orthologs for GFF55 only