Conservation of cofitness between PS417_18585 and PS417_23800 in Pseudomonas simiae WCS417

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_18585 3-isopropylmalate dehydrogenase 1.0 PS417_23800 ketol-acid reductoisomerase 0.95 2
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS20565 3-isopropylmalate dehydrogenase 1.00 PFLU_RS25640 ketol-acid reductoisomerase 0.85 10
Pseudomonas fluorescens SBW25 0.99 PFLU_RS20565 3-isopropylmalate dehydrogenase 1.00 PFLU_RS25640 ketol-acid reductoisomerase 0.81 9
Pseudomonas fluorescens FW300-N2E2 0.97 Pf6N2E2_66 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.94 Pf6N2E2_5177 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.96 1
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_21415 3-isopropylmalate dehydrogenase 1.00 AO356_16180 ketol-acid reductoisomerase 0.97 3
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_12 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 1.00 Pf1N1B4_2880 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.94 2
Pseudomonas sp. RS175 0.95 PFR28_02821 3-isopropylmalate dehydrogenase 0.94 PFR28_03697 Ketol-acid reductoisomerase (NADP(+)) 0.87 3
Pseudomonas fluorescens GW456-L13 0.95 PfGW456L13_3945 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 1.00 PfGW456L13_1540 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.98 3
Pseudomonas syringae pv. syringae B728a ΔmexB 0.94 Psyr_1985 3-isopropylmalate dehydrogenase 0.95 Psyr_0848 ketol-acid reductoisomerase 0.94 8
Pseudomonas syringae pv. syringae B728a 0.94 Psyr_1985 3-isopropylmalate dehydrogenase 0.95 Psyr_0848 ketol-acid reductoisomerase 0.93 9
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_20635 3-isopropylmalate dehydrogenase 1.00 AO353_14505 ketol-acid reductoisomerase 0.98 3
Pseudomonas putida KT2440 0.93 PP_1988 3-isopropylmalate dehydrogenase 0.93 PP_4678 Ketol-acid reductoisomerase 0.94 2
Pseudomonas sp. S08-1 0.88 OH686_04470 3-isopropylmalate dehydrogenase 0.95 OH686_08115 ketol-acid reductoisomerase 0.90 6
Pseudomonas stutzeri RCH2 0.87 Psest_2589 3-isopropylmalate dehydrogenase 0.91 Psest_1038 ketol-acid reductoisomerase — —
Xanthomonas campestris pv. campestris strain 8004 0.81 Xcc-8004.1053.1 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.52 Xcc-8004.1060.1 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.81 29
Acinetobacter radioresistens SK82 0.73 MPMX26_00348 3-isopropylmalate dehydrogenase 0.84 MPMX26_00474 Ketol-acid reductoisomerase (NADP(+)) 0.99 3
Marinobacter adhaerens HP15 0.71 HP15_1832 3-isopropylmalate dehydrogenase 0.83 HP15_533 ketol-acid reductoisomerase — —
Dechlorosoma suillum PS 0.69 Dsui_3198 3-isopropylmalate dehydrogenase 0.78 Dsui_3527 ketol-acid reductoisomerase — —
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS16500 3-isopropylmalate dehydrogenase 0.73 HSERO_RS19010 ketol-acid reductoisomerase low > 78
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS14530 3-isopropylmalate dehydrogenase 0.71 ABZR87_RS14945 ketol-acid reductoisomerase — —
Variovorax sp. OAS795 0.64 ABID97_RS08455 3-isopropylmalate dehydrogenase 0.72 ABID97_RS14895 ketol-acid reductoisomerase — —
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_06072 3-isopropylmalate dehydrogenase 0.70 H281DRAFT_04553 ketol-acid reductoisomerase 0.43 49
Paraburkholderia graminis OAS925 0.64 ABIE53_004804 3-isopropylmalate dehydrogenase 0.70 ABIE53_001576 ketol-acid reductoisomerase — —
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS14385 3-isopropylmalate dehydrogenase 0.71 RR42_RS05445 ketol-acid reductoisomerase — —
Ralstonia solanacearum GMI1000 0.64 RS_RS09990 3-isopropylmalate dehydrogenase 0.71 RS_RS10410 ketol-acid reductoisomerase — —
Variovorax sp. SCN45 0.64 GFF3888 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.73 GFF1161 Ketol-acid reductoisomerase (NADP(+)) (EC 1.1.1.86) — —
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS02610 3-isopropylmalate dehydrogenase 0.71 RALBFv3_RS03040 ketol-acid reductoisomerase — —
Ralstonia solanacearum UW163 0.64 UW163_RS11115 3-isopropylmalate dehydrogenase 0.71 UW163_RS10685 ketol-acid reductoisomerase — —
Castellaniella sp019104865 MT123 0.63 ABCV34_RS04280 3-isopropylmalate dehydrogenase 0.73 ABCV34_RS01220 ketol-acid reductoisomerase 0.65 2
Hydrogenophaga sp. GW460-11-11-14-LB1 0.63 GFF3360 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.77 GFF4278 Ketol-acid reductoisomerase (EC 1.1.1.86) — —
Ralstonia solanacearum PSI07 0.63 RPSI07_RS14705 3-isopropylmalate dehydrogenase 0.71 RPSI07_RS14265 ketol-acid reductoisomerase — —
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS33900 3-isopropylmalate dehydrogenase 0.70 BPHYT_RS06555 ketol-acid reductoisomerase 0.94 7
Acidovorax sp. GW101-3H11 0.63 Ac3H11_1528 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.74 Ac3H11_527 Ketol-acid reductoisomerase (EC 1.1.1.86) — —
Paraburkholderia sabiae LMG 24235 0.63 QEN71_RS17620 3-isopropylmalate dehydrogenase 0.69 QEN71_RS24215 ketol-acid reductoisomerase 0.80 13
Desulfovibrio vulgaris Miyazaki F 0.62 DvMF_1794 3-isopropylmalate dehydrogenase (RefSeq) 0.57 DvMF_0155 ketol-acid reductoisomerase (RefSeq) 0.78 38
Phaeobacter inhibens DSM 17395 0.60 PGA1_c29830 3-isopropylmalate dehydrogenase LeuB 0.63 PGA1_c06580 ketol-acid reductoisomerase IlvC — —
Dinoroseobacter shibae DFL-12 0.59 Dshi_0081 3-isopropylmalate dehydrogenase (RefSeq) 0.62 Dshi_2396 ketol-acid reductoisomerase (RefSeq) — —
Sinorhizobium meliloti 1021 0.59 SMc04405 3-isopropylmalate dehydrogenase 0.66 SMc04346 ketol-acid reductoisomerase 0.91 34
Agrobacterium fabrum C58 0.59 Atu2791 3-isopropylmalate dehydrogenase 0.64 Atu2019 ketol-acid reductoisomerase — —
Desulfovibrio vulgaris Hildenborough JW710 0.59 DVU2985 leuB 3-isopropylmalate dehydrogenase (TIGR) 0.57 DVU1378 ilvC ketol-acid reductoisomerase (TIGR) 0.95 6
Azospirillum sp. SherDot2 0.59 MPMX19_00607 3-isopropylmalate dehydrogenase 0.67 MPMX19_01774 Ketol-acid reductoisomerase (NADP(+)) — —
Rhizobium sp. OAE497 0.59 ABIE40_RS19050 3-isopropylmalate dehydrogenase 0.64 ABIE40_RS11360 ketol-acid reductoisomerase — —
Rhodospirillum rubrum S1H 0.58 Rru_A1191 3-isopropylmalate dehydrogenase (NCBI) 0.67 Rru_A0469 Ketol-acid reductoisomerase (NCBI) 0.92 5
Synechococcus elongatus PCC 7942 0.58 Synpcc7942_1505 leuB 3-isopropylmalate dehydrogenase 0.61 Synpcc7942_1552 ilvC ketol-acid reductoisomerase — —
Magnetospirillum magneticum AMB-1 0.56 AMB_RS20570 3-isopropylmalate dehydrogenase 0.67 AMB_RS17750 ketol-acid reductoisomerase — —
Azospirillum brasilense Sp245 0.56 AZOBR_RS14130 3-isopropylmalate dehydrogenase 0.67 AZOBR_RS06570 ketol-acid reductoisomerase — —
Sphingomonas koreensis DSMZ 15582 0.56 Ga0059261_3190 3-isopropylmalate dehydrogenase 0.66 Ga0059261_0066 ketol-acid reductoisomerase (EC 1.1.1.86) — —
Rhodopseudomonas palustris CGA009 0.55 TX73_001175 3-isopropylmalate dehydrogenase 0.66 TX73_010485 ketol-acid reductoisomerase — —
Caulobacter crescentus NA1000 0.52 CCNA_00193 3-isopropylmalate dehydrogenase 0.67 CCNA_02204 ketol-acid reductoisomerase/2-dehydropantoate 2-reductase — —
Caulobacter crescentus NA1000 Δfur 0.52 CCNA_00193 3-isopropylmalate dehydrogenase 0.67 CCNA_02204 ketol-acid reductoisomerase/2-dehydropantoate 2-reductase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.50 ABZR88_RS11605 3-isopropylmalate dehydrogenase 0.21 ABZR88_RS11590 ketol-acid reductoisomerase — —
Lysobacter sp. OAE881 0.49 ABIE51_RS17585 3-isopropylmalate dehydrogenase 0.53 ABIE51_RS17545 ketol-acid reductoisomerase 0.98 1
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS10325 3-isopropylmalate dehydrogenase 0.53 LRK54_RS10315 ketol-acid reductoisomerase 0.96 2
Rhodanobacter denitrificans MT42 0.46 LRK55_RS09965 3-isopropylmalate dehydrogenase 0.53 LRK55_RS09955 ketol-acid reductoisomerase low > 63
Rhodanobacter sp. FW510-T8 0.46 OKGIIK_13595 leuB 3-isopropylmalate dehydrogenase 0.53 OKGIIK_13605 ilvC ketol-acid reductoisomerase low > 52
Echinicola vietnamensis KMM 6221, DSM 17526 0.46 Echvi_2062 3-isopropylmalate dehydrogenase 0.22 Echvi_2058 ketol-acid reductoisomerase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.45 A4249_RS09995 3-isopropylmalate dehydrogenase 0.48 A4249_RS10025 ketol-acid reductoisomerase 0.99 41
Dyella japonica UNC79MFTsu3.2 0.43 ABZR86_RS15950 3-isopropylmalate dehydrogenase 0.52 ABZR86_RS15940 ketol-acid reductoisomerase 0.95 16
Methanococcus maripaludis JJ 0.29 MMJJ_RS02220 3-isopropylmalate dehydrogenase 0.50 MMJJ_RS01620 ketol-acid reductoisomerase — —
Methanococcus maripaludis S2 0.28 MMP_RS02855 3-isopropylmalate dehydrogenase 0.50 MMP_RS03435 ketol-acid reductoisomerase — —
Mycobacterium tuberculosis H37Rv 0.28 Rv2995c Probable 3-isopropylmalate dehydrogenase LeuB (beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) 0.56 Rv3001c Probable KETOL-acid reductoisomerase IlvC (acetohydroxy-acid isomeroreductase) (alpha-keto-beta-hydroxylacil reductoisomerase) — —
Bifidobacterium breve UCC2003 0.27 BBR_RS12870 3-isopropylmalate dehydrogenase 0.51 BBR_RS10830 ketol-acid reductoisomerase low > 34

Not shown: 41 genomes with orthologs for PS417_18585 only; 0 genomes with orthologs for PS417_23800 only