Conservation of cofitness between PS417_26685 and PS417_19885 in Pseudomonas simiae WCS417

79 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_26685 hypothetical protein 1.0 PS417_19885 flagellar basal body rod protein FlgG 0.26 20
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS28330 YqgE/AlgH family protein 1.00 PFLU_RS21855 flagellar basal-body rod protein FlgG low > 109
Pseudomonas fluorescens SBW25 0.98 PFLU_RS28330 YqgE/AlgH family protein 1.00 PFLU_RS21855 flagellar basal-body rod protein FlgG low > 109
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_4609 UPF0301 protein YqgE 0.94 Pf6N2E2_2627 Flagellar basal-body rod protein FlgG low > 103
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_13465 hypothetical protein 0.94 AO356_03925 flagellar basal-body rod protein FlgG low > 104
Pseudomonas sp. RS175 0.89 PFR28_04234 hypothetical protein 0.93 PFR28_00805 Flagellar basal-body rod protein FlgG low > 88
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_2350 UPF0301 protein YqgE 0.94 Pf1N1B4_3569 Flagellar basal-body rod protein FlgG — —
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_1019 UPF0301 protein YqgE 0.94 PfGW456L13_4386 Flagellar basal-body rod protein FlgG low > 87
Pseudomonas fluorescens FW300-N2E3 0.83 AO353_08120 hypothetical protein 0.91 AO353_18600 flagellar basal-body rod protein FlgG low > 101
Pseudomonas putida KT2440 0.76 PP_4995 putative protein possibly involved in the control of exopolysaccharide production 0.90 PP_4385 flagellar basal-body rod protein FlgG low > 96
Pseudomonas syringae pv. syringae B728a 0.75 Psyr_0485 Protein of unknown function DUF179 0.85 Psyr_3475 Flagellar basal body rod protein:Protein of unknown function DUF1078 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.75 Psyr_0485 Protein of unknown function DUF179 0.85 Psyr_3475 Flagellar basal body rod protein:Protein of unknown function DUF1078 — —
Pseudomonas sp. S08-1 0.73 OH686_10925 UPF0301 protein YqgE 0.86 OH686_02950 flagellar basal-body rod protein FlgG low > 80
Pseudomonas stutzeri RCH2 0.68 Psest_0294 Putative transcriptional regulator 0.86 Psest_2963 flagellar basal-body rod protein FlgG, Gram-negative bacteria low > 67
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS04220 hypothetical protein 0.60 BPHYT_RS18870 flagellar basal body rod protein FlgG low > 109
Marinobacter adhaerens HP15 0.47 HP15_3510 transcriptional regulator 0.66 HP15_1472 flagellar basal-body rod protein FlgG low > 73
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_04814 putative transcriptional regulator 0.61 H281DRAFT_05767 flagellar basal-body rod protein FlgG low > 103
Paraburkholderia graminis OAS925 0.46 ABIE53_001128 putative transcriptional regulator 0.61 ABIE53_000096 flagellar basal-body rod protein FlgG low > 113
Ralstonia solanacearum GMI1000 0.46 RS_RS03395 YqgE/AlgH family protein 0.59 RS_RS18820 flagellar basal-body rod protein FlgG — —
Ralstonia solanacearum UW163 0.46 UW163_RS00955 DUF179 domain-containing protein 0.59 UW163_RS17470 flagellar basal-body rod protein FlgG — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS12610 DUF179 domain-containing protein 0.59 RALBFv3_RS21715 flagellar basal-body rod protein FlgG low > 76
Ralstonia solanacearum PSI07 0.46 RPSI07_RS20650 YqgE/AlgH family protein 0.58 RPSI07_RS01415 flagellar basal-body rod protein FlgG low > 81
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS15875 hypothetical protein 0.58 RR42_RS35700 flagellar basal body rod protein FlgG low > 128
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS25795 YqgE/AlgH family protein 0.60 QEN71_RS28895 flagellar basal-body rod protein FlgG low > 153
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS08610 YqgE/AlgH family protein 0.56 ABZR87_RS22265 flagellar basal-body rod protein FlgG low > 80
Castellaniella sp019104865 MT123 0.44 ABCV34_RS10730 YqgE/AlgH family protein 0.55 ABCV34_RS05745 flagellar basal-body rod protein FlgG low > 48
Lysobacter sp. OAE881 0.43 ABIE51_RS16025 YqgE/AlgH family protein 0.58 ABIE51_RS16695 flagellar basal-body rod protein FlgG low > 62
Alteromonas macleodii MIT1002 0.43 MIT1002_03056 hypothetical protein 0.53 MIT1002_01046 Distal rod protein low > 70
Dechlorosoma suillum PS 0.43 Dsui_0593 putative transcriptional regulator 0.62 Dsui_1737 flagellar basal-body rod protein FlgG low > 51
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.1720.1 UPF0301 protein YqgE 0.63 Xcc-8004.2784.1 Flagellar basal-body rod protein FlgG low > 74
Magnetospirillum magneticum AMB-1 0.42 AMB_RS04505 YqgE/AlgH family protein 0.46 AMB_RS17680 flagellar basal-body rod protein FlgG low > 64
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS10380 YqgE/AlgH family protein 0.67 ABZR86_RS20100 flagellar basal-body rod protein FlgG — —
Pectobacterium carotovorum WPP14 0.41 HER17_RS02630 YqgE/AlgH family protein 0.60 HER17_RS08190 flagellar basal-body rod protein FlgG 0.56 70
Azospirillum brasilense Sp245 0.41 AZOBR_RS10525 hypothetical protein 0.46 AZOBR_RS11220 flagellar basal body rod protein FlgG low > 97
Agrobacterium fabrum C58 0.41 Atu0781 hypothetical protein 0.44 Atu0552 flagellar basal-body rod protein low > 89
Rhodanobacter denitrificans MT42 0.41 LRK55_RS03980 YqgE/AlgH family protein 0.66 LRK55_RS13170 flagellar basal-body rod protein FlgG — —
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS04210 YqgE/AlgH family protein 0.66 LRK54_RS13430 flagellar basal-body rod protein FlgG low > 59
Azospirillum sp. SherDot2 0.40 MPMX19_01077 hypothetical protein 0.46 MPMX19_01484 Flagellar basal-body rod protein FlgG low > 112
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS02315 transcriptional regulator 0.61 HSERO_RS10205 flagellar basal body rod protein FlgG low > 78
Dickeya dadantii 3937 0.40 DDA3937_RS18565 YqgE/AlgH family protein 0.60 DDA3937_RS13455 flagellar basal-body rod protein FlgG low > 74
Vibrio cholerae E7946 ATCC 55056 0.40 CSW01_02485 YqgE/AlgH family protein 0.60 CSW01_11200 flagellar basal-body rod protein FlgG low > 62
Variovorax sp. SCN45 0.40 GFF2157 UPF0301 protein YqgE 0.58 GFF5720 Flagellar basal-body rod protein FlgG low > 127
Serratia liquefaciens MT49 0.40 IAI46_21395 YqgE/AlgH family protein 0.61 IAI46_15935 flagellar basal-body rod protein FlgG low > 86
Shewanella sp. ANA-3 0.40 Shewana3_1200 hypothetical protein (RefSeq) 0.55 Shewana3_1326 flgG flagellar basal body rod protein FlgG (RefSeq) low > 73
Dickeya dianthicola ME23 0.40 DZA65_RS19635 YqgE/AlgH family protein 0.60 DZA65_RS13985 flagellar basal-body rod protein FlgG low > 75
Rhodopseudomonas palustris CGA009 0.40 TX73_004710 YqgE/AlgH family protein 0.48 TX73_020220 flagellar basal-body rod protein FlgG low > 86
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_11085 algH YqgE/AlgH family protein 0.66 OKGIIK_02675 flgG flagellar basal-body rod protein FlgG low > 52
Erwinia tracheiphila SCR3 0.39 LU632_RS05475 YqgE/AlgH family protein 0.57 LU632_RS10420 flgG flagellar basal-body rod protein FlgG low > 74
Dickeya dianthicola 67-19 0.39 HGI48_RS18500 YqgE/AlgH family protein 0.60 HGI48_RS13500 flagellar basal-body rod protein FlgG low > 71
Rhizobium sp. OAE497 0.39 ABIE40_RS04185 YqgE/AlgH family protein 0.47 ABIE40_RS02985 flagellar basal-body rod protein FlgG low > 107
Bosea sp. OAE506 0.39 ABIE41_RS23005 YqgE/AlgH family protein 0.45 ABIE41_RS13420 flagellar basal-body rod protein FlgG low > 77
Escherichia fergusonii Becca 0.39 EFB2_00954 hypothetical protein 0.59 EFB2_02896 Flagellar basal-body rod protein FlgG low > 86
Escherichia coli ECRC99 0.39 KEDOAH_08870 algH YqgE/AlgH family protein 0.59 KEDOAH_24105 flgG flagellar basal-body rod protein FlgG — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_00770 hypothetical protein 0.59 OHPLBJKB_02587 Flagellar basal-body rod protein FlgG low > 73
Escherichia coli ECOR38 0.39 HEPCGN_18575 yqgE YqgE/AlgH family protein 0.59 HEPCGN_23840 flgG flagellar basal-body rod protein FlgG low > 85
Escherichia coli ECRC62 0.39 BNILDI_09720 yqgE YqgE/AlgH family protein 0.59 BNILDI_19340 flgG flagellar basal-body rod protein FlgG — —
Escherichia coli ECRC101 0.39 MCAODC_09790 yqgE YqgE/AlgH family protein 0.59 MCAODC_23010 flgG flagellar basal-body rod protein FlgG — —
Escherichia coli Nissle 1917 0.39 ECOLIN_RS16400 YqgE/AlgH family protein 0.59 ECOLIN_RS06240 flagellar basal-body rod protein FlgG — —
Rhodospirillum rubrum S1H 0.39 Rru_A3059 Protein of unknown function DUF179 (NCBI) 0.44 Rru_A2843 hypothetical protein (NCBI) low > 58
Shewanella amazonensis SB2B 0.39 Sama_2472 putative transcriptional regulator (RefSeq) 0.55 Sama_2313 flgG flagellar basal body rod protein FlgG (RefSeq) low > 62
Escherichia coli ECRC98 0.39 JDDGAC_22900 yqgE YqgE/AlgH family protein 0.59 JDDGAC_07310 flgG flagellar basal-body rod protein FlgG — —
Pantoea sp. MT58 0.39 IAI47_03610 YqgE/AlgH family protein 0.55 IAI47_12140 flagellar basal-body rod protein FlgG low > 76
Escherichia coli ECOR27 0.39 NOLOHH_11140 yqgE YqgE/AlgH family protein 0.58 NOLOHH_21180 flgG flagellar basal-body rod protein FlgG low > 57
Escherichia coli BL21 0.39 ECD_02778 uncharacterized protein 0.59 ECD_01074 flagellar component of cell-distal portion of basal-body rod low > 60
Escherichia coli ECRC102 0.39 NIAGMN_17035 yqgE YqgE/AlgH family protein 0.59 NIAGMN_24180 flgG flagellar basal-body rod protein FlgG — —
Escherichia coli ECRC101 0.39 OKFHMN_19270 yqgE YqgE/AlgH family protein 0.59 OKFHMN_03650 flgG flagellar basal-body rod protein FlgG — —
Escherichia coli BW25113 0.39 b2948 yqgE orf, hypothetical protein (VIMSS) 0.59 b1078 flgG flagellar component of cell-distal portion of basal-body rod (NCBI) low > 76
Sinorhizobium meliloti 1021 0.38 SMc00019 hypothetical protein 0.44 SMc03030 flagellar basal body rod protein FlgG low > 103
Shewanella oneidensis MR-1 0.38 SO3346 conserved hypothetical protein (NCBI ptt file) 0.55 SO3244 flgG flagellar basal-body rod protein FlgG (NCBI ptt file) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF3050 UPF0301 protein YqgE 0.59 GFF3359 Flagellar basal-body rod protein FlgG 0.48 24
Enterobacter asburiae PDN3 0.37 EX28DRAFT_2986 Putative transcriptional regulator 0.58 EX28DRAFT_1854 flagellar basal-body rod protein FlgG, Gram-negative bacteria low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF648 UPF0301 protein YqgE 0.56 GFF1410 Flagellar basal-body rod protein FlgG low > 90
Enterobacter sp. TBS_079 0.37 MPMX20_03806 hypothetical protein 0.58 MPMX20_01757 Flagellar basal-body rod protein FlgG low > 85
Shewanella loihica PV-4 0.37 Shew_1144 hypothetical protein (RefSeq) 0.56 Shew_1350 flgG flagellar basal body rod protein FlgG (RefSeq) low > 60
Phaeobacter inhibens DSM 17395 0.36 PGA1_c03130 Putative transcriptional regulator 0.43 PGA1_c35780 flagellar basal-body rod protein FlgG low > 62
Rahnella sp. WP5 0.35 EX31_RS02670 YqgE/AlgH family protein 0.60 EX31_RS11290 flagellar basal-body rod protein FlgG low > 89
Caulobacter crescentus NA1000 0.33 CCNA_03506 putative transcriptional regulator 0.45 CCNA_02143 flagellar basal-body rod protein flgG low > 66
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_03506 putative transcriptional regulator 0.45 CCNA_02143 flagellar basal-body rod protein flgG low > 67
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_4015 Putative transcriptional regulator 0.50 Ga0059261_2094 flagellar basal-body rod protein FlgG, Gram-negative bacteria low > 68
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS00260 YqgE/AlgH family protein 0.49 A4249_RS09625 flagellar basal-body rod protein FlgG low > 48

Not shown: 10 genomes with orthologs for PS417_26685 only; 2 genomes with orthologs for PS417_19885 only