| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Marinobacter adhaerens HP15 | 1.0 | HP15_3225 | | tRNA-dihydrouridine synthase B | 1.0 | HP15_3506 | | dihydroorotase, multifunctional complex type | 0.54 | 12 |
| Pseudomonas stutzeri RCH2 | 0.69 | Psest_1016 | | putative TIM-barrel protein, nifR3 family | 0.42 | Psest_0290 | | dihydroorotase, multifunctional complex type | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.68 | Pf6N2E2_3517 | | tRNA dihydrouridine synthase B (EC 1.-.-.-) | 0.39 | Pf6N2E2_4605 | | Dihydroorotase (EC 3.5.2.3) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.68 | AO356_08215 | | tRNA-dihydrouridine synthase B | 0.40 | AO356_13445 | | dihydroorotase | low | > 104 |
| Pseudomonas sp. RS175 | 0.68 | PFR28_05216 | | tRNA-dihydrouridine synthase B | 0.40 | PFR28_04238 | | Dihydroorotase-like protein | — | — |
| Pseudomonas sp. S08-1 | 0.68 | OH686_07610 | | tRNA-dihydrouridine synthase DusB | 0.39 | OH686_10945 | | Dihydroorotase | — | — |
| Pseudomonas putida KT2440 | 0.67 | PP_4820 | | tRNA-dihydrouridine synthase B | 0.40 | PP_4999 | | dihydroorotase-like protein | low | > 96 |
| Pseudomonas syringae pv. syringae B728a | 0.67 | Psyr_4404 | | tRNA-U20-dihydrouridine synthase | 0.41 | Psyr_0481 | | dihydroorotase | — | — |
| Pseudomonas fluorescens SBW25 | 0.67 | PFLU_RS03025 | | tRNA dihydrouridine synthase DusB | 0.41 | PFLU_RS28350 | | dihydroorotase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.67 | PFLU_RS03025 | | tRNA dihydrouridine synthase DusB | 0.41 | PFLU_RS28350 | | dihydroorotase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.67 | Psyr_4404 | | tRNA-U20-dihydrouridine synthase | 0.41 | Psyr_0481 | | dihydroorotase | — | — |
| Pseudomonas simiae WCS417 | 0.67 | PS417_02950 | | tRNA-dihydrouridine synthase B | 0.42 | PS417_26705 | | dihydroorotase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.66 | Pf1N1B4_1313 | | tRNA dihydrouridine synthase B (EC 1.-.-.-) | 0.41 | Pf1N1B4_2346 | | Dihydroorotase (EC 3.5.2.3) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.66 | PfGW456L13_55 | | tRNA dihydrouridine synthase B (EC 1.-.-.-) | 0.42 | PfGW456L13_1015 | | Dihydroorotase (EC 3.5.2.3) | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.66 | AO353_13660 | | tRNA-dihydrouridine synthase B | 0.40 | AO353_08140 | | dihydroorotase | — | — |
| Dechlorosoma suillum PS | 0.60 | Dsui_1593 | | putative TIM-barrel protein, nifR3 family | 0.30 | Dsui_0597 | | dihydroorotase, multifunctional complex type | — | — |
| Herbaspirillum seropedicae SmR1 | 0.60 | HSERO_RS02050 | | tRNA-dihydrouridine synthase B | 0.30 | HSERO_RS02340 | | dihydroorotase | low | > 78 |
| Paraburkholderia sabiae LMG 24235 | 0.60 | QEN71_RS26770 | | tRNA dihydrouridine synthase DusB | 0.32 | QEN71_RS25775 | | dihydroorotase | low | > 153 |
| Dyella japonica UNC79MFTsu3.2 | 0.60 | ABZR86_RS11525 | | tRNA dihydrouridine synthase DusB | 0.11 | ABZR86_RS08760 | | dihydroorotase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.59 | H281DRAFT_04249 | | tRNA-U20-dihydrouridine synthase | 0.30 | H281DRAFT_04818 | | dihydroorotase | low | > 103 |
| Ralstonia sp. UNC404CL21Col | 0.59 | ABZR87_RS07650 | | tRNA dihydrouridine synthase DusB | 0.32 | ABZR87_RS08630 | | dihydroorotase | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.59 | RPSI07_RS21520 | | tRNA dihydrouridine synthase DusB | 0.32 | RPSI07_RS20630 | | dihydroorotase | — | — |
| Lysobacter sp. OAE881 | 0.59 | ABIE51_RS16450 | | tRNA dihydrouridine synthase DusB | 0.12 | ABIE51_RS13460 | | dihydroorotase | — | — |
| Variovorax sp. OAS795 | 0.58 | ABID97_RS24735 | | tRNA dihydrouridine synthase DusB | 0.30 | ABID97_RS24655 | | dihydroorotase | low | > 91 |
| Variovorax sp. SCN45 | 0.58 | GFF2144 | | tRNA-dihydrouridine synthase DusB | 0.29 | GFF2161 | | Dihydroorotase (EC 3.5.2.3) | low | > 127 |
| Ralstonia solanacearum GMI1000 | 0.58 | RS_RS02515 | | tRNA dihydrouridine synthase DusB | 0.32 | RS_RS03415 | | dihydroorotase | — | — |
| Ralstonia solanacearum UW163 | 0.58 | UW163_RS01890 | | tRNA dihydrouridine synthase DusB | 0.32 | UW163_RS00935 | | dihydroorotase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.58 | RALBFv3_RS11695 | | tRNA dihydrouridine synthase DusB | 0.32 | RALBFv3_RS12630 | | dihydroorotase | — | — |
| Rahnella sp. WP5 | 0.58 | EX31_RS12180 | | tRNA dihydrouridine synthase DusB | 0.11 | EX31_RS04570 | | allantoinase AllB | low | > 89 |
| Paraburkholderia graminis OAS925 | 0.57 | ABIE53_003489 | | tRNA-dihydrouridine synthase B | 0.31 | ABIE53_001133 | | dihydroorotase | low | > 113 |
| Escherichia coli Nissle 1917 | 0.57 | ECOLIN_RS18725 | | tRNA dihydrouridine synthase DusB | 0.13 | ECOLIN_RS02975 | | allantoinase AllB | low | > 52 |
| Escherichia coli ECOR38 | 0.57 | HEPCGN_16505 | dusB | tRNA dihydrouridine synthase DusB | 0.12 | HEPCGN_06540 | allB | allantoinase | low | > 85 |
| Escherichia coli ECRC62 | 0.57 | BNILDI_02050 | dusB | tRNA dihydrouridine synthase DusB | 0.12 | BNILDI_22315 | allB | allantoinase | — | — |
| Escherichia fergusonii Becca | 0.57 | EFB2_00564 | | tRNA-dihydrouridine synthase B | 0.13 | EFB2_03550 | | Allantoinase | low | > 86 |
| Escherichia coli BW25113 | 0.57 | b3260 | dusB | tRNA-dihydrouridine synthase B (NCBI) | 0.12 | b0512 | allB | allantoinase (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 0.57 | NOLOHH_09470 | dusB | tRNA dihydrouridine synthase DusB | 0.12 | NOLOHH_00885 | allB | allantoinase | low | > 57 |
| Escherichia coli BL21 | 0.57 | ECD_03118 | | tRNA-dihydrouridine synthase B | 0.12 | ECD_00462 | | allantoinase | low | > 60 |
| Burkholderia phytofirmans PsJN | 0.57 | BPHYT_RS16585 | | tRNA-dihydrouridine synthase B | 0.30 | BPHYT_RS04245 | | dihydroorotase | low | > 109 |
| Klebsiella michiganensis M5al | 0.56 | BWI76_RS25565 | | tRNA dihydrouridine synthase DusB | 0.13 | BWI76_RS07015 | | cyclic amidohydrolase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.56 | RR42_RS02730 | | tRNA-dihydrouridine synthase B | 0.31 | RR42_RS15855 | | dihydroorotase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.55 | GFF634 | | tRNA dihydrouridine synthase B (EC 1.-.-.-) | 0.32 | GFF652 | | Dihydroorotase (EC 3.5.2.3) | low | > 90 |
| Acinetobacter radioresistens SK82 | 0.53 | MPMX26_02127 | | tRNA-dihydrouridine synthase B | 0.30 | MPMX26_01100 | | Dihydroorotase-like protein | low | > 36 |
| Acidovorax sp. GW101-3H11 | 0.53 | Ac3H11_3996 | | tRNA dihydrouridine synthase B (EC 1.-.-.-) | 0.30 | Ac3H11_3977 | | Dihydroorotase (EC 3.5.2.3) | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.50 | OHPLBJKB_00445 | | putative tRNA-dihydrouridine synthase | 0.12 | OHPLBJKB_03169 | | Allantoinase | low | > 73 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.49 | GFF2124 | | tRNA dihydrouridine synthase B (EC 1.-.-.-) | 0.13 | GFF4428 | | Allantoinase (EC 3.5.2.5) | low | > 78 |
| Magnetospirillum magneticum AMB-1 | 0.45 | AMB_RS11940 | | tRNA dihydrouridine synthase DusB | 0.27 | AMB_RS18295 | | dihydroorotase | — | — |
| Azospirillum sp. SherDot2 | 0.43 | MPMX19_01110 | | tRNA-dihydrouridine synthase B | 0.27 | MPMX19_01053 | | Dihydroorotase | low | > 112 |
| Azospirillum brasilense Sp245 | 0.42 | AZOBR_RS14420 | | tRNA-dihydrouridine synthase | 0.28 | AZOBR_RS20570 | | dihydroorotase | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.41 | Ga0059261_0140 | | tRNA-U20-dihydrouridine synthase | 0.19 | Ga0059261_0075 | | Dihydroorotase and related cyclic amidohydrolases | — | — |
| Agrobacterium fabrum C58 | 0.38 | Atu1444 | | nitrogen regulation protein | 0.22 | Atu1307 | | dihydroorotase | low | > 89 |
| Rhizobium sp. OAE497 | 0.37 | ABIE40_RS09080 | | tRNA dihydrouridine synthase DusB | 0.22 | ABIE40_RS07380 | | dihydroorotase | — | — |
| Sinorhizobium meliloti 1021 | 0.37 | SMc01041 | | NIFR3-like protein | 0.24 | SMc01361 | | dihydroorotase | low | > 103 |
| Phaeobacter inhibens DSM 17395 | 0.37 | PGA1_c14770 | | tRNA-dihydrouridine synthase DusB | 0.23 | PGA1_c03020 | | dihydroorotase PyrC | low | > 62 |
| Rhodospirillum rubrum S1H | 0.35 | Rru_A1676 | | Dihydrouridine synthase TIM-barrel protein nifR3 (NCBI) | 0.27 | Rru_A3191 | | Dihydroorotase multifunctional complex type (NCBI) | low | > 58 |
| Rhodopseudomonas palustris CGA009 | 0.35 | TX73_013410 | | tRNA dihydrouridine synthase DusB | 0.26 | TX73_016125 | | dihydroorotase | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.35 | A4249_RS04810 | | tRNA dihydrouridine synthase DusB | 0.24 | A4249_RS04255 | | dihydroorotase | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.34 | CA265_RS21125 | | tRNA dihydrouridine synthase DusB | 0.26 | CA265_RS03710 | | dihydroorotase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.34 | Dshi_1576 | | putative TIM-barrel protein, nifR3 family (RefSeq) | 0.24 | Dshi_3094 | | dihydroorotase, multifunctional complex type (RefSeq) | low | > 64 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.33 | CA264_17860 | | tRNA dihydrouridine synthase DusB | 0.25 | CA264_01480 | | dihydroorotase | low | > 74 |
| Parabacteroides merdae CL09T00C40 | 0.33 | HMPREF1078_RS05375 | | tRNA dihydrouridine synthase DusB | 0.11 | HMPREF1078_RS00745 | | dihydroorotase | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.33 | ABZR88_RS22340 | | tRNA dihydrouridine synthase DusB | 0.30 | ABZR88_RS07940 | | dihydroorotase family protein | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.32 | Echvi_1531 | | putative TIM-barrel protein, nifR3 family | 0.23 | Echvi_4623 | | Dihydroorotase and related cyclic amidohydrolases | — | — |
| Phocaeicola vulgatus CL09T03C04 | 0.32 | HMPREF1058_RS10945 | | tRNA dihydrouridine synthase DusB | 0.12 | HMPREF1058_RS15395 | | dihydroorotase | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.32 | ABI39_RS06125 | | tRNA dihydrouridine synthase DusB | 0.11 | ABI39_RS11365 | | dihydroorotase | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.31 | BT3073 | | putative TIM-barrel enzyme, possible dehydrogenase, contains a highly conserved dihydrouridine synthase domain (NCBI ptt file) | 0.13 | BT0250 | | dihydroorotase (DHOase) (NCBI ptt file) | — | — |
| Bacteroides ovatus ATCC 8483 | 0.31 | BACOVA_02724 | | TIM-barrel protein, nifR3 family | 0.12 | BACOVA_00399 | | amidohydrolase family protein | — | — |
| Bacteroides stercoris CC31F | 0.31 | HMPREF1181_RS01530 | | tRNA dihydrouridine synthase DusB | 0.12 | HMPREF1181_RS04650 | | dihydroorotase | low | > 56 |
| Caulobacter crescentus NA1000 Δfur | 0.30 | CCNA_01813 | | tRNA-dihydrouridine synthase | 0.22 | CCNA_02526 | | dihydroorotase | low | > 67 |
| Caulobacter crescentus NA1000 | 0.30 | CCNA_01813 | | tRNA-dihydrouridine synthase | 0.22 | CCNA_02526 | | dihydroorotase | low | > 66 |
| Mycobacterium tuberculosis H37Rv | 0.28 | Rv0823c | | Possible transcriptional regulatory protein | 0.24 | Rv1381 | | Probable dihydroorotase PyrC (DHOase) | — | — |
| Synechococcus elongatus PCC 7942 | 0.24 | Synpcc7942_0283 | | Dihydrouridine synthase TIM-barrel protein nifR3 | 0.14 | Synpcc7942_0486 | pyrC | dihydroorotase | — | — |
| Fusobacterium nucleatum SB010 | 0.23 | HUW76_04330 | | tRNA-dihydrouridine synthase | 0.23 | HUW76_08760 | | dihydroorotase | low | > 35 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.21 | DVU0661 | | dihydrouridine synthase family protein (TIGR) | 0.24 | DVU2902 | pyrC | dihydroorotase (TIGR) | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.20 | DvMF_2019 | | dihydrouridine synthase DuS (RefSeq) | 0.25 | DvMF_1426 | | dihydroorotase, multifunctional complex type (RefSeq) | low | > 51 |
Not shown: 24 genomes with orthologs for HP15_3225 only; 4 genomes with orthologs for HP15_3506 only