Conservation of cofitness between PGA1_262p02110 and PGA1_c34550 in Phaeobacter inhibens DSM 17395

77 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Phaeobacter inhibens DSM 17395 1.0 PGA1_262p02110 putative chemotaxis protein CheW 1.0 PGA1_c34550 DNA repair protein RadC 0.25 8
Rhizobium sp. OAE497 0.42 ABIE40_RS11750 chemotaxis protein CheW 0.49 ABIE40_RS08620 DNA repair protein RadC 0.42 83
Sinorhizobium meliloti 1021 0.42 SMc01468 chemotaxis protein 0.53 SMc00299 DNA repair protein RadC low > 103
Agrobacterium fabrum C58 0.42 Atu2075 chemotaxis protein 0.47 Atu1607 DNA repair protein low > 89
Brevundimonas sp. GW460-12-10-14-LB2 0.38 A4249_RS15570 chemotaxis protein CheW 0.44 A4249_RS00510 DNA repair protein RadC low > 48
Azospirillum brasilense Sp245 0.34 AZOBR_RS14240 chemotaxis protein CheW 0.49 AZOBR_RS04400 DNA repair protein RadC low > 97
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_0784 CheW-like protein 0.22 Psyr_0222 DNA replication and repair protein RadC — —
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_0784 CheW-like protein 0.22 Psyr_0222 DNA replication and repair protein RadC low > 86
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_02895 Chemotaxis protein CheW 0.21 OKGIIK_15660 radC DNA repair protein RadC low > 52
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_19540 chemotaxis protein CheW 0.23 CSW01_01155 DNA repair protein RadC low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.30 GFF2450 Positive regulator of CheA protein activity (CheW) 0.26 GFF1170 DNA repair protein RadC low > 90
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS24980 purine-binding chemotaxis protein CheW 0.25 PFLU_RS29445 JAB domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.29 PFLU_RS24980 purine-binding chemotaxis protein CheW 0.25 PFLU_RS29445 JAB domain-containing protein low > 109
Rhodanobacter denitrificans MT42 0.29 LRK55_RS13390 chemotaxis protein CheW 0.19 LRK55_RS08695 DNA repair protein RadC low > 63
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS13650 chemotaxis protein CheW 0.19 LRK54_RS09165 DNA repair protein RadC low > 59
Bosea sp. OAE506 0.29 ABIE41_RS12290 chemotaxis protein CheW 0.53 ABIE41_RS13815 DNA repair protein RadC — —
Shewanella sp. ANA-3 0.29 Shewana3_1367 CheW protein (RefSeq) 0.26 Shewana3_3770 radC DNA repair protein RadC (RefSeq) low > 73
Pseudomonas sp. RS175 0.28 PFR28_02514 Chemotaxis protein CheW 0.24 PFR28_04412 hypothetical protein low > 88
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS29005 chemotaxis protein CheW 0.28 QEN71_RS03085 DNA repair protein RadC low > 153
Pseudomonas putida KT2440 0.28 PP_4332 Chemotaxis protein CheW 0.24 PP_5284 UPF0758 protein PP_5284 low > 96
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.2882.1 Positive regulator of CheA protein activity (CheW) 0.23 Xcc-8004.4897.1 DNA repair protein RadC low > 74
Shewanella amazonensis SB2B 0.28 Sama_2272 purine-binding chemotaxis protein CheW (RefSeq) 0.26 Sama_0327 radC DNA repair protein RadC (RefSeq) low > 62
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_29860 chemotaxis protein CheW 0.24 AO356_12545 hypothetical protein low > 104
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS14950 purine-binding chemotaxis protein 0.28 HSERO_RS05945 hypothetical protein low > 78
Burkholderia phytofirmans PsJN 0.28 BPHYT_RS18995 purine-binding chemotaxis protein 0.27 BPHYT_RS15625 hypothetical protein low > 109
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_416 Positive regulator of CheA protein activity (CheW) 0.24 Pf6N2E2_4377 DNA repair protein RadC low > 103
Pseudomonas sp. S08-1 0.28 OH686_21850 Positive regulator of CheA protein activity (CheW) 0.22 OH686_13620 UPF0758 family protein low > 80
Desulfovibrio vulgaris Miyazaki F 0.28 DvMF_0792 CheW protein (RefSeq) 0.25 DvMF_3086 DNA repair protein RadC (RefSeq) low > 51
Ralstonia solanacearum PSI07 0.27 RPSI07_RS06250 chemotaxis protein CheW 0.29 RPSI07_RS12675 JAB domain-containing protein low > 81
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS35845 chemotaxis protein CheW 0.29 RR42_RS16995 hypothetical protein low > 128
Ralstonia solanacearum IBSBF1503 0.27 RALBFv3_RS17395 chemotaxis protein CheW 0.29 RALBFv3_RS04710 JAB domain-containing protein low > 76
Marinobacter adhaerens HP15 0.27 HP15_2292 purine-binding chemotaxis protein CheW 0.22 HP15_3321 DNA repair protein RadC-like protein low > 73
Paraburkholderia graminis OAS925 0.27 ABIE53_000124 purine-binding chemotaxis protein CheW 0.28 ABIE53_003289 DNA repair protein RadC low > 113
Ralstonia solanacearum UW163 0.27 UW163_RS21755 chemotaxis protein CheW 0.29 UW163_RS08960 JAB domain-containing protein — —
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_05743 CheW protein 0.27 H281DRAFT_04066 DNA replication and repair protein RadC low > 103
Ralstonia solanacearum GMI1000 0.27 RS_RS23915 chemotaxis protein CheW 0.29 RS_RS12270 JAB domain-containing protein low > 80
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_3635 Positive regulator of CheA protein activity (CheW) 0.26 Pf1N1B4_2126 DNA repair protein RadC — —
Variovorax sp. SCN45 0.27 GFF5724 Positive regulator of CheA protein activity (CheW) 0.20 GFF5700 UPF0758 family protein — —
Alteromonas macleodii MIT1002 0.27 MIT1002_01110 Chemotaxis protein CheW 0.25 MIT1002_00049 DNA repair protein RadC low > 70
Ralstonia sp. UNC404CL21Col 0.27 ABZR87_RS17965 chemotaxis protein CheW 0.29 ABZR87_RS00330 DNA repair protein RadC low > 80
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_4321 Positive regulator of CheA protein activity (CheW) 0.24 PfGW456L13_798 DNA repair protein RadC low > 87
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_18830 chemotaxis protein CheW 0.24 AO353_09220 hypothetical protein low > 101
Pseudomonas simiae WCS417 0.26 PS417_19650 chemotaxis protein CheW 0.25 PS417_27770 hypothetical protein low > 88
Enterobacter sp. TBS_079 0.26 MPMX20_02797 Chemotaxis protein CheW 0.26 MPMX20_00097 hypothetical protein low > 85
Pectobacterium carotovorum WPP14 0.26 HER17_RS08105 chemotaxis protein CheW 0.25 HER17_RS20830 DNA repair protein RadC low > 75
Pseudomonas stutzeri RCH2 0.26 Psest_0655 Chemotaxis signal transduction protein 0.25 Psest_3803 DNA repair protein radc low > 67
Rahnella sp. WP5 0.26 EX31_RS11400 chemotaxis protein CheW 0.27 EX31_RS14470 JAB domain-containing protein low > 89
Dechlorosoma suillum PS 0.26 Dsui_1435 chemotaxis signal transduction protein 0.25 Dsui_1537 DNA repair protein radc low > 51
Serratia liquefaciens MT49 0.26 IAI46_16035 chemotaxis protein CheW 0.27 IAI46_24825 DNA repair protein RadC low > 86
Dickeya dadantii 3937 0.26 DDA3937_RS13540 chemotaxis protein CheW 0.27 DDA3937_RS20515 DNA repair protein RadC low > 74
Enterobacter asburiae PDN3 0.26 EX28DRAFT_0663 Chemotaxis signal transduction protein 0.24 EX28DRAFT_3888 DNA repair protein radc low > 76
Dickeya dianthicola ME23 0.26 DZA65_RS14070 chemotaxis protein CheW 0.27 DZA65_RS00755 JAB domain-containing protein low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.26 GFF1668 Positive regulator of CheA protein activity (CheW) 0.26 GFF371 DNA repair protein RadC low > 78
Dickeya dianthicola 67-19 0.26 HGI48_RS13585 chemotaxis protein CheW 0.27 HGI48_RS00700 DNA repair protein RadC low > 71
Pantoea sp. MT58 0.26 IAI47_08305 chemotaxis protein CheW 0.28 IAI47_00620 DNA repair protein RadC low > 76
Desulfovibrio vulgaris Hildenborough JW710 0.25 DVU1904 cheW-2 chemotaxis protein CheW (TIGR) 0.25 DVU1193 radC DNA repair protein RadC (TIGR) low > 55
Dyella japonica UNC79MFTsu3.2 0.25 ABZR86_RS22225 chemotaxis protein CheW 0.22 ABZR86_RS15615 DNA repair protein RadC low > 74
Acidovorax sp. GW101-3H11 0.25 Ac3H11_1422 Positive regulator of CheA protein activity (CheW) 0.20 Ac3H11_1774 DNA repair protein RadC low > 79
Escherichia coli ECRC62 0.25 BNILDI_15355 cheW chemotaxis protein CheW 0.27 BNILDI_04015 radC DNA repair protein RadC — —
Escherichia coli ECRC102 0.25 NIAGMN_01935 cheW chemotaxis protein CheW 0.27 NIAGMN_13380 radC DNA repair protein RadC — —
Escherichia coli ECRC101 0.25 MCAODC_19280 cheW chemotaxis protein CheW 0.27 MCAODC_06130 radC DNA repair protein RadC — —
Lysobacter sp. OAE881 0.25 ABIE51_RS16920 chemotaxis protein CheW 0.22 ABIE51_RS00095 DNA repair protein RadC low > 62
Escherichia coli BL21 0.25 ECD_01858 purine-binding chemotaxis protein 0.27 ECD_03495 UPF0758 family protein — —
Escherichia coli ECOR27 0.25 NOLOHH_16565 cheW chemotaxis protein CheW 0.27 NOLOHH_07500 radC DNA repair protein RadC low > 57
Escherichia coli ECRC98 0.25 JDDGAC_00700 cheW chemotaxis protein CheW 0.27 JDDGAC_19245 radC DNA repair protein RadC — —
Escherichia coli ECOR38 0.25 HEPCGN_04545 cheW chemotaxis protein CheW 0.27 HEPCGN_14445 radC DNA repair protein RadC low > 85
Escherichia fergusonii Becca 0.25 EFB2_02056 Chemotaxis protein CheW 0.27 EFB2_00175 hypothetical protein low > 86
Escherichia coli ECRC101 0.25 OKFHMN_26125 cheW chemotaxis protein CheW 0.27 OKFHMN_15620 radC DNA repair protein RadC — —
Escherichia coli BW25113 0.25 b1887 cheW purine-binding chemotaxis protein (NCBI) 0.27 b3638 radC DNA repair protein (VIMSS) low > 76
Escherichia coli Nissle 1917 0.25 ECOLIN_RS10775 chemotaxis protein CheW 0.27 ECOLIN_RS20730 DNA repair protein RadC — —
Escherichia coli ECRC99 0.25 KEDOAH_01980 cheW chemotaxis protein CheW 0.27 KEDOAH_12530 radC DNA repair protein RadC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.25 OHPLBJKB_01841 Chemotaxis protein CheW 0.27 OHPLBJKB_00064 hypothetical protein low > 73
Erwinia tracheiphila SCR3 0.25 LU632_RS13555 cheW chemotaxis protein CheW 0.26 LU632_RS21995 radC DNA repair protein RadC low > 74
Rhodospirillum rubrum S1H 0.24 Rru_A1400 CheW protein (NCBI) 0.52 Rru_A0732 DNA repair protein RadC (NCBI) low > 58
Rhodopseudomonas palustris CGA009 0.24 TX73_008620 chemotaxis protein CheW 0.48 TX73_002000 DNA repair protein RadC — —
Sphingomonas koreensis DSMZ 15582 0.23 Ga0059261_1119 Chemotaxis signal transduction protein 0.39 Ga0059261_3175 DNA repair protein radc low > 68
Castellaniella sp019104865 MT123 0.21 ABCV34_RS05830 chemotaxis protein CheW 0.23 ABCV34_RS00910 DNA repair protein RadC low > 48
Pontibacter actiniarum KMM 6156, DSM 19842 0.16 CA264_07610 chemotaxis protein CheW 0.19 CA264_13835 hypothetical protein low > 74

Not shown: 5 genomes with orthologs for PGA1_262p02110 only; 18 genomes with orthologs for PGA1_c34550 only