Conservation of cofitness between PS417_27245 and PS417_13820 in Pseudomonas simiae WCS417

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_27245 aminotransferase DegT 1.0 PS417_13820 UDP-glucose 6-dehydrogenase 0.49 2
Pseudomonas fluorescens SBW25 0.98 PFLU_RS28905 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.98 PFLU_RS14800 UDP-glucose/GDP-mannose dehydrogenase family protein 0.78 42
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS28905 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.98 PFLU_RS14800 UDP-glucose/GDP-mannose dehydrogenase family protein low > 109
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_08725 aminotransferase DegT 0.89 AO353_25565 UDP-glucose 6-dehydrogenase
Herbaspirillum seropedicae SmR1 0.80 HSERO_RS10435 aminotransferase DegT 0.51 HSERO_RS10010 UDP-glucose 6-dehydrogenase
Ralstonia solanacearum PSI07 0.68 RPSI07_RS17515 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.51 RPSI07_RS19665 UDP-glucose/GDP-mannose dehydrogenase family protein
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS22430 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.51 QEN71_RS08435 UDP-glucose/GDP-mannose dehydrogenase family protein
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_00805 dTDP-4-amino-4,6-dideoxygalactose transaminase 0.52 H281DRAFT_03915 UDPglucose 6-dehydrogenase
Ralstonia sp. UNC404CL21Col 0.66 ABZR87_RS11420 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.52 ABZR87_RS09495 UDP-glucose/GDP-mannose dehydrogenase family protein
Burkholderia phytofirmans PsJN 0.65 BPHYT_RS08930 aminotransferase DegT 0.52 BPHYT_RS14865 UDP-glucose 6-dehydrogenase
Ralstonia solanacearum GMI1000 0.65 RS_RS06630 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.51 RS_RS04540 UDP-glucose/GDP-mannose dehydrogenase family protein
Paraburkholderia graminis OAS925 0.65 ABIE53_002021 dTDP-4-amino-4,6-dideoxygalactose transaminase 0.51 ABIE53_003148 UDPglucose 6-dehydrogenase
Ralstonia solanacearum UW163 0.65 UW163_RS13295 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.50 UW163_RS16005 UDP-glucose/GDP-mannose dehydrogenase family protein
Ralstonia solanacearum IBSBF1503 0.65 RALBFv3_RS15850 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.50 RALBFv3_RS13805 UDP-glucose/GDP-mannose dehydrogenase family protein
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS30905 aminotransferase DegT 0.52 RR42_RS15820 UDP-glucose 6-dehydrogenase low > 128
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase 0.82 Psyr_2696 UDP-glucose 6-dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase 0.82 Psyr_2696 UDP-glucose 6-dehydrogenase low > 86
Variovorax sp. OAS795 0.33 ABID97_RS02145 DegT/DnrJ/EryC1/StrS family aminotransferase 0.49 ABID97_RS11855 UDP-glucose/GDP-mannose dehydrogenase family protein low > 91
Rahnella sp. WP5 0.33 EX31_RS14020 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.63 EX31_RS10095 UDP-glucose/GDP-mannose dehydrogenase family protein
Serratia liquefaciens MT49 0.32 IAI46_11015 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.65 IAI46_14240 UDP-glucose/GDP-mannose dehydrogenase family protein
Rhodanobacter sp. FW510-T8 0.31 OKGIIK_10755 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.57 OKGIIK_07930 UDP-glucose 6-dehydrogenase
Desulfovibrio vulgaris Hildenborough JW710 0.31 DVU3010 lpsC aminotransferase, DegT/DnrJ/EryC1/StrS family (TIGR) 0.50 DVU1907 ugd UDP-glucose 6-dehydrogenase (TIGR)
Erwinia tracheiphila SCR3 0.30 LU632_RS16495 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.65 LU632_RS12915 UDP-glucose/GDP-mannose dehydrogenase family protein
Pantoea sp. MT58 0.29 IAI47_21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.64 IAI47_09035 UDP-glucose/GDP-mannose dehydrogenase family protein
Methanococcus maripaludis S2 0.29 MMP_RS01880 DegT/DnrJ/EryC1/StrS family aminotransferase 0.17 MMP_RS01890 nucleotide sugar dehydrogenase 0.91 5
Pseudomonas sp. RS175 0.26 PFR28_00919 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.82 PFR28_01889 UDP-glucose 6-dehydrogenase
Caulobacter crescentus NA1000 0.26 CCNA_01064 perosamine synthetase 0.41 CCNA_02464 UDP-glucose 6-dehydrogenase low > 66
Caulobacter crescentus NA1000 Δfur 0.26 CCNA_01064 perosamine synthetase 0.41 CCNA_02464 UDP-glucose 6-dehydrogenase low > 67
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_3586 DegT/DnrJ/EryC1/StrS aminotransferase 0.85 Pf1N1B4_4809 UDP-glucose dehydrogenase (EC 1.1.1.22)
Marinobacter adhaerens HP15 0.25 HP15_2398 aminotransferase, DegT/DnrJ/EryC1/StrS family 0.61 HP15_2047 UDP-glucose 6-dehydrogenase
Dechlorosoma suillum PS 0.25 Dsui_0082 UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase 0.56 Dsui_1947 nucleotide sugar dehydrogenase
Magnetospirillum magneticum AMB-1 0.25 AMB_RS00640 DegT/DnrJ/EryC1/StrS family aminotransferase 0.42 AMB_RS02980 UDP-glucose/GDP-mannose dehydrogenase family protein
Rhodospirillum rubrum S1H 0.24 Rru_A2746 DegT/DnrJ/EryC1/StrS aminotransferase (NCBI) 0.41 Rru_A2116 UDP-glucose 6-dehydrogenase (NCBI)
Mucilaginibacter yixingensis YX-36 DSM 26809 0.24 ABZR88_RS08945 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.46 ABZR88_RS17430 UDP-glucose/GDP-mannose dehydrogenase family protein
Bacteroides thetaiotaomicron VPI-5482 0.24 BT0612 putative aminotransferase (NCBI ptt file) 0.48 BT0829 UDP-glucose 6-dehydrogenase (NCBI ptt file) low > 81
Pseudomonas fluorescens GW456-L13 0.24 PfGW456L13_4370 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase 0.86 PfGW456L13_3233 UDP-glucose dehydrogenase (EC 1.1.1.22) low > 87
Pedobacter sp. GW460-11-11-14-LB5 0.24 CA265_RS01760 aminotransferase DegT 0.46 CA265_RS25420 UDP-glucose 6-dehydrogenase
Desulfovibrio vulgaris Miyazaki F 0.24 DvMF_1911 DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq) 0.50 DvMF_0282 nucleotide sugar dehydrogenase (RefSeq)
Pseudomonas fluorescens FW300-N2E2 0.24 Pf6N2E2_2610 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase 0.83 Pf6N2E2_1151 UDP-glucose dehydrogenase (EC 1.1.1.22) low > 103
Pontibacter actiniarum KMM 6156, DSM 19842 0.23 CA264_00280 DegT/DnrJ/EryC1/StrS aminotransferase 0.50 CA264_13410 UDP-glucose 6-dehydrogenase
Fusobacterium nucleatum SB010 0.22 HUW76_01355 DegT/DnrJ/EryC1/StrS family aminotransferase 0.11 HUW76_01350 nucleotide sugar dehydrogenase 0.99 18
Sphingomonas koreensis DSMZ 15582 0.22 Ga0059261_3110 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 0.40 Ga0059261_4043 UDP-glucose dehydrogenase
Azospirillum brasilense Sp245 0.22 AZOBR_RS33710 putative aminotransferase 0.41 AZOBR_RS33720 UDP-glucose 6-dehydrogenase
Vibrio cholerae E7946 ATCC 55056 0.21 CSW01_01285 perosamine synthetase 0.15 CSW01_18075 nucleotide sugar dehydrogenase low > 62
Phocaeicola vulgatus CL09T03C04 0.21 HMPREF1058_RS03380 DegT/DnrJ/EryC1/StrS family aminotransferase 0.50 HMPREF1058_RS01255 UDP-glucose/GDP-mannose dehydrogenase family protein low > 67
Phaeobacter inhibens DSM 17395 0.20 PGA1_c05070 putative pyridoxal-phosphate-dependent aminotransferase 0.36 PGA1_65p00450 UDP-glucose 6-dehydrogenase Ugd low > 62
Bosea sp. OAE506 0.20 ABIE41_RS03045 dTDP-4-amino-4,6-dideoxygalactose transaminase 0.41 ABIE41_RS10435 UDP-glucose/GDP-mannose dehydrogenase family protein
Phocaeicola dorei CL03T12C01 0.20 ABI39_RS11115 DegT/DnrJ/EryC1/StrS family aminotransferase 0.50 ABI39_RS16475 UDP-glucose/GDP-mannose dehydrogenase family protein low > 72
Pseudomonas fluorescens FW300-N2C3 0.20 AO356_03400 aminotransferase DegT 0.83 AO356_26380 UDP-glucose 6-dehydrogenase low > 104
Sinorhizobium meliloti 1021 0.20 SM_b21248 aminotransferase 0.42 SMc02641 UDP-glucose 6-dehydrogenase low > 103
Echinicola vietnamensis KMM 6221, DSM 17526 0.20 Echvi_3862 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 0.48 Echvi_4410 nucleotide sugar dehydrogenase low > 79
Variovorax sp. SCN45 0.19 GFF6873 Aminotransferase, DegT/DnrJ/EryC1/StrS family 0.47 GFF3562 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) low > 127
Parabacteroides merdae CL09T00C40 0.19 HMPREF1078_RS01585 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.49 HMPREF1078_RS17435 UDP-glucose/GDP-mannose dehydrogenase family protein low > 61
Rhodopseudomonas palustris CGA009 0.19 TX73_020615 DegT/DnrJ/EryC1/StrS family aminotransferase 0.40 TX73_020820 UDP-glucose/GDP-mannose dehydrogenase family protein
Xanthomonas campestris pv. campestris strain 8004 0.18 Xcc-8004.3174.1 Aminotransferase 0.57 Xcc-8004.3391.1 hypothetical protein
Rhodanobacter denitrificans FW104-10B01 0.18 LRK54_RS05160 DegT/DnrJ/EryC1/StrS family aminotransferase 0.56 LRK54_RS16910 UDP-glucose/GDP-mannose dehydrogenase family protein
Rhodanobacter denitrificans MT42 0.18 LRK55_RS04940 DegT/DnrJ/EryC1/StrS family aminotransferase 0.56 LRK55_RS16625 UDP-glucose/GDP-mannose dehydrogenase family protein
Dyella japonica UNC79MFTsu3.2 0.18 ABZR86_RS18520 DegT/DnrJ/EryC1/StrS family aminotransferase 0.58 ABZR86_RS07210 UDP-glucose/GDP-mannose dehydrogenase family protein
Shewanella amazonensis SB2B 0.18 Sama_2257 DegT/DnrJ/EryC1/StrS family protein (RefSeq) 0.61 Sama_2236 UDP-glucose 6-dehydrogenase (RefSeq) low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.17 GFF1844 Aminotransferase 0.53 GFF4731 UDP-glucose dehydrogenase (EC 1.1.1.22) 0.99 7
Acinetobacter radioresistens SK82 0.16 MPMX26_00061 GDP-perosamine synthase 0.23 MPMX26_00064 UDP-glucose 6-dehydrogenase low > 36
Castellaniella sp019104865 MT123 0.16 ABCV34_RS12945 DegT/DnrJ/EryC1/StrS family aminotransferase 0.14 ABCV34_RS12915 nucleotide sugar dehydrogenase
Bacteroides stercoris CC31F 0.16 HMPREF1181_RS14960 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.49 HMPREF1181_RS14375 UDP-glucose/GDP-mannose dehydrogenase family protein
Brevundimonas sp. GW460-12-10-14-LB2 0.15 A4249_RS13795 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.42 A4249_RS02200 UDP-glucose/GDP-mannose dehydrogenase family protein

Not shown: 28 genomes with orthologs for PS417_27245 only; 8 genomes with orthologs for PS417_13820 only