Conservation of cofitness between HP15_3742 and HP15_2549 in Marinobacter adhaerens HP15

76 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_3742 Fmu, rRNA SAM-dependent methyltransferase 1.0 HP15_2549 adenine phosphoribosyltransferase 0.42 11
Pseudomonas stutzeri RCH2 0.45 Psest_0021 ribosomal RNA small subunit methyltransferase RsmB 0.54 Psest_2539 adenine phosphoribosyltransferase low > 67
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_00225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.52 CSW01_05360 adenine phosphoribosyltransferase low > 62
Pseudomonas putida KT2440 0.42 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.50 PP_4266 Adenine phosphoribosyltransferase low > 96
Pseudomonas sp. S08-1 0.42 OH686_12525 16S rRNA (cytosine(967)-C(5))-methyltransferase 0.57 OH686_02250 adenine phosphoribosyltransferase low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF2390 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 0.48 GFF4387 Adenine phosphoribosyltransferase (EC 2.4.2.7) low > 78
Serratia liquefaciens MT49 0.42 IAI46_23275 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.47 IAI46_05225 adenine phosphoribosyltransferase low > 86
Escherichia coli ECOR27 0.41 NOLOHH_09320 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.48 NOLOHH_01100 apt adenine phosphoribosyltransferase low > 57
Escherichia coli ECRC62 0.41 BNILDI_02200 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.48 BNILDI_22520 apt adenine phosphoribosyltransferase — —
Escherichia coli ECRC98 0.41 JDDGAC_21150 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.48 JDDGAC_11820 apt adenine phosphoribosyltransferase — —
Escherichia coli ECRC101 0.41 OKFHMN_17520 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.48 OKFHMN_08170 apt adenine phosphoribosyltransferase — —
Escherichia coli ECRC99 0.41 KEDOAH_10620 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.48 KEDOAH_19795 apt adenine phosphoribosyltransferase — —
Escherichia coli ECRC102 0.41 NIAGMN_15290 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.48 NIAGMN_06225 apt adenine phosphoribosyltransferase — —
Escherichia coli BW25113 0.41 b3289 rsmB 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) 0.48 b0469 apt adenine phosphoribosyltransferase (NCBI) low > 76
Escherichia coli ECRC101 0.41 MCAODC_08050 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.48 MCAODC_27395 apt adenine phosphoribosyltransferase — —
Escherichia coli BL21 0.41 ECD_03139 16S rRNA m(5)C967 methyltransferase, SAM-dependent 0.48 ECD_00420 adenine phosphoribosyltransferase low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_00415 Ribosomal RNA small subunit methyltransferase B 0.48 OHPLBJKB_03205 Adenine phosphoribosyltransferase low > 73
Pseudomonas syringae pv. syringae B728a 0.41 Psyr_0017 16S rRNA m(5)C-967 methyltransferase 0.53 Psyr_3426 adenine phosphoribosyltransferase low > 86
Escherichia coli ECOR38 0.41 HEPCGN_16350 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.48 HEPCGN_06785 apt adenine phosphoribosyltransferase low > 85
Pseudomonas syringae pv. syringae B728a ΔmexB 0.41 Psyr_0017 16S rRNA m(5)C-967 methyltransferase 0.53 Psyr_3426 adenine phosphoribosyltransferase low > 86
Escherichia fergusonii Becca 0.41 EFB2_00535 Ribosomal RNA small subunit methyltransferase B 0.48 EFB2_03589 Adenine phosphoribosyltransferase low > 86
Escherichia coli Nissle 1917 0.41 ECOLIN_RS18875 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.48 ECOLIN_RS02790 adenine phosphoribosyltransferase — —
Klebsiella michiganensis M5al 0.41 BWI76_RS25680 16S rRNA m5C967 methyltransferase 0.45 BWI76_RS06815 adenine phosphoribosyltransferase low > 92
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_10630 16S rRNA methyltransferase 0.53 AO353_00665 adenine phosphoribosyltransferase low > 101
Pectobacterium carotovorum WPP14 0.40 HER17_RS02215 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.47 HER17_RS15710 adenine phosphoribosyltransferase low > 75
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_11275 16S rRNA methyltransferase 0.53 AO356_02490 adenine phosphoribosyltransferase low > 104
Pantoea sp. MT58 0.40 IAI47_02280 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.42 IAI47_14480 adenine phosphoribosyltransferase low > 76
Erwinia tracheiphila SCR3 0.40 LU632_RS22480 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.44 LU632_RS18140 apt adenine phosphoribosyltransferase low > 74
Enterobacter asburiae PDN3 0.40 EX28DRAFT_0039 16S rRNA (cytosine(967)-C(5))-methyltransferase 0.46 EX28DRAFT_2489 adenine phosphoribosyltransferase (EC 2.4.2.7) low > 76
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_1914 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.54 Pf1N1B4_3866 Adenine phosphoribosyltransferase (EC 2.4.2.7) low > 87
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_4121 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.53 Pf6N2E2_2324 Adenine phosphoribosyltransferase (EC 2.4.2.7) low > 103
Dickeya dadantii 3937 0.40 DDA3937_RS19135 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.47 DDA3937_RS05775 adenine phosphoribosyltransferase low > 74
Pseudomonas sp. RS175 0.40 PFR28_04663 Ribosomal RNA small subunit methyltransferase B 0.53 PFR28_01078 Adenine phosphoribosyltransferase low > 88
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_652 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.54 PfGW456L13_4072 Adenine phosphoribosyltransferase (EC 2.4.2.7) low > 87
Pseudomonas fluorescens SBW25 0.39 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.52 PFLU_RS22400 adenine phosphoribosyltransferase low > 109
Enterobacter sp. TBS_079 0.39 MPMX20_04196 Ribosomal RNA small subunit methyltransferase B 0.47 MPMX20_01071 Adenine phosphoribosyltransferase low > 85
Shewanella loihica PV-4 0.39 Shew_3738 sun protein (RefSeq) 0.52 Shew_2236 adenine phosphoribosyltransferase (RefSeq) low > 60
Rahnella sp. WP5 0.39 EX31_RS15985 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.48 EX31_RS22505 adenine phosphoribosyltransferase low > 89
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.52 PFLU_RS22400 adenine phosphoribosyltransferase low > 109
Dickeya dianthicola 67-19 0.39 HGI48_RS19225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.48 HGI48_RS05825 adenine phosphoribosyltransferase low > 71
Pseudomonas simiae WCS417 0.39 PS417_00085 16S rRNA methyltransferase 0.52 PS417_20790 adenine phosphoribosyltransferase low > 88
Dickeya dianthicola ME23 0.39 DZA65_RS20350 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.47 DZA65_RS06150 adenine phosphoribosyltransferase low > 75
Shewanella sp. ANA-3 0.38 Shewana3_0033 sun protein (RefSeq) 0.47 Shewana3_2447 adenine phosphoribosyltransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.37 SO0030 sun sun protein (NCBI ptt file) 0.47 SO2012 apt adenine phosphoribosyltransferase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.37 Sama_0041 sun protein (RefSeq) 0.50 Sama_1309 adenine phosphoribosyltransferase (RefSeq) low > 62
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS04950 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.63 ABZR87_RS07105 adenine phosphoribosyltransferase low > 80
Ralstonia solanacearum PSI07 0.35 RPSI07_RS23575 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.65 RPSI07_RS22085 adenine phosphoribosyltransferase low > 81
Alteromonas macleodii MIT1002 0.34 MIT1002_00018 Ribosomal RNA small subunit methyltransferase B 0.53 MIT1002_02655 Adenine phosphoribosyltransferase low > 70
Dechlorosoma suillum PS 0.34 Dsui_0812 ribosomal RNA small subunit methyltransferase RsmB 0.58 Dsui_2706 adenine phosphoribosyltransferase low > 51
Lysobacter sp. OAE881 0.34 ABIE51_RS02255 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.40 ABIE51_RS05465 adenine phosphoribosyltransferase low > 62
Ralstonia solanacearum GMI1000 0.33 RS_RS00375 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.64 RS_RS02065 adenine phosphoribosyltransferase low > 80
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_13790 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.41 OKGIIK_01965 adenine phosphoribosyltransferase low > 52
Ralstonia solanacearum UW163 0.33 UW163_RS03790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.65 UW163_RS02365 adenine phosphoribosyltransferase — —
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS09790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.65 RALBFv3_RS11215 adenine phosphoribosyltransferase low > 76
Dyella japonica UNC79MFTsu3.2 0.32 ABZR86_RS13890 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.39 ABZR86_RS19335 adenine phosphoribosyltransferase low > 74
Acinetobacter radioresistens SK82 0.32 MPMX26_03021 Ribosomal RNA small subunit methyltransferase B 0.30 MPMX26_02330 Adenine phosphoribosyltransferase low > 36
Paraburkholderia sabiae LMG 24235 0.31 QEN71_RS00175 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.61 QEN71_RS01790 adenine phosphoribosyltransferase low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF1789 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.61 GFF2440 Adenine phosphoribosyltransferase (EC 2.4.2.7) low > 90
Burkholderia phytofirmans PsJN 0.31 BPHYT_RS01475 16S rRNA methyltransferase 0.61 BPHYT_RS02940 adenine phosphoribosyltransferase low > 109
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.4741.1 hypothetical protein 0.38 Xcc-8004.2273.1 Adenine phosphoribosyltransferase (EC 2.4.2.7) low > 74
Rhodanobacter denitrificans MT42 0.30 LRK55_RS09765 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.33 LRK55_RS04570 adenine phosphoribosyltransferase low > 63
Paraburkholderia bryophila 376MFSha3.1 0.30 H281DRAFT_02237 16S rRNA (cytosine967-C5)-methyltransferase 0.60 H281DRAFT_01920 adenine phosphoribosyltransferase low > 103
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS10125 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.34 LRK54_RS04790 adenine phosphoribosyltransferase low > 59
Castellaniella sp019104865 MT123 0.30 ABCV34_RS14225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.66 ABCV34_RS14375 adenine phosphoribosyltransferase low > 48
Paraburkholderia graminis OAS925 0.29 ABIE53_000392 16S rRNA (cytosine967-C5)-methyltransferase 0.58 ABIE53_000725 adenine phosphoribosyltransferase low > 113
Cupriavidus basilensis FW507-4G11 0.28 RR42_RS20450 16S rRNA methyltransferase 0.65 RR42_RS02125 adenine phosphoribosyltransferase low > 128
Acidovorax sp. GW101-3H11 0.28 Ac3H11_4461 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.59 Ac3H11_4267 Adenine phosphoribosyltransferase (EC 2.4.2.7) low > 79
Azospirillum brasilense Sp245 0.20 AZOBR_RS00235 MFS transporter 0.35 AZOBR_RS21480 adenine phosphoribosyltransferase low > 97
Azospirillum sp. SherDot2 0.20 MPMX19_02327 Ribosomal RNA small subunit methyltransferase B 0.39 MPMX19_06118 Adenine phosphoribosyltransferase low > 112
Phaeobacter inhibens DSM 17395 0.19 PGA1_c32880 putative ribosomal RNA small subunit methyltransferase B 0.51 PGA1_c06370 adenine phosphoribosyltransferase Apt low > 62
Dinoroseobacter shibae DFL-12 0.19 Dshi_3033 Fmu (Sun) domain protein (RefSeq) 0.50 Dshi_2074 adenine phosphoribosyltransferase (RefSeq) low > 64
Rhodospirillum rubrum S1H 0.18 Rru_A0243 tRNA/rRNA cytosine-C5-methylase (NCBI) 0.36 Rru_A0607 Adenine phosphoribosyl transferase (NCBI) low > 58
Agrobacterium fabrum C58 0.18 Atu2825 Sun protein 0.55 Atu2236 adenine phosphoribosyltransferase low > 89
Fusobacterium nucleatum SB010 0.17 HUW76_07955 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.36 HUW76_09035 adenine phosphoribosyltransferase low > 35
Rhizobium sp. OAE497 0.17 ABIE40_RS19140 RsmB/NOP family class I SAM-dependent RNA methyltransferase 0.55 ABIE40_RS13115 adenine phosphoribosyltransferase low > 107
Rhodopseudomonas palustris CGA009 0.17 TX73_000155 transcription antitermination factor NusB 0.54 TX73_023325 adenine phosphoribosyltransferase low > 86
Sphingomonas koreensis DSMZ 15582 0.15 Ga0059261_2239 tRNA and rRNA cytosine-C5-methylases 0.49 Ga0059261_3222 adenine phosphoribosyltransferase (EC 2.4.2.7) low > 68

Not shown: 9 genomes with orthologs for HP15_3742 only; 12 genomes with orthologs for HP15_2549 only