| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Variovorax sp. SCN45 | 1.0 | GFF4697 | | TldE protein, part of TldE/TldD proteolytic complex | 1.0 | GFF2522 | | Glutaredoxin-related protein | 0.86 | 10 |
| Variovorax sp. OAS795 | 0.96 | ABID97_RS20695 | | metalloprotease PmbA | 0.95 | ABID97_RS07180 | | Grx4 family monothiol glutaredoxin | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.81 | Ac3H11_3262 | | TldE protein, part of TldE/TldD proteolytic complex | 0.83 | Ac3H11_4778 | | Glutaredoxin-related protein | low | > 79 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.75 | GFF3655 | | TldE protein, part of TldE/TldD proteolytic complex | 0.89 | GFF1268 | | Glutaredoxin-related protein | low | > 90 |
| Herbaspirillum seropedicae SmR1 | 0.62 | HSERO_RS09265 | | peptidase C69 | 0.66 | HSERO_RS19865 | | glutaredoxin | — | — |
| Castellaniella sp019104865 MT123 | 0.60 | ABCV34_RS10610 | | metalloprotease PmbA | 0.61 | ABCV34_RS14065 | | Grx4 family monothiol glutaredoxin | — | — |
| Ralstonia solanacearum UW163 | 0.60 | UW163_RS15845 | | metalloprotease PmbA | 0.74 | UW163_RS07025 | | monothiol glutaredoxin, Grx4 family | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.60 | RALBFv3_RS13965 | | metalloprotease PmbA | 0.74 | RALBFv3_RS06600 | | monothiol glutaredoxin, Grx4 family | — | — |
| Ralstonia solanacearum PSI07 | 0.59 | RPSI07_RS19505 | | metalloprotease PmbA | 0.73 | RPSI07_RS10625 | | monothiol glutaredoxin, Grx4 family | — | — |
| Ralstonia sp. UNC404CL21Col | 0.59 | ABZR87_RS09660 | | metalloprotease PmbA | 0.72 | ABZR87_RS02265 | | Grx4 family monothiol glutaredoxin | low | > 80 |
| Paraburkholderia graminis OAS925 | 0.59 | ABIE53_003116 | | PmbA protein | 0.74 | ABIE53_003665 | | monothiol glutaredoxin | low | > 113 |
| Cupriavidus basilensis FW507-4G11 | 0.59 | RR42_RS14750 | | peptidase PMbA | 0.74 | RR42_RS18485 | | glutaredoxin | low | > 128 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.59 | H281DRAFT_04304 | | microcin-processing peptidase 1. Unknown type peptidase. MEROPS family U62 | 0.74 | H281DRAFT_05690 | | monothiol glutaredoxin | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.58 | QEN71_RS04270 | | metalloprotease PmbA | 0.74 | QEN71_RS27680 | | Grx4 family monothiol glutaredoxin | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.58 | BPHYT_RS14705 | | peptidase C69 | 0.74 | BPHYT_RS17525 | | glutaredoxin | low | > 109 |
| Ralstonia solanacearum GMI1000 | 0.57 | RS_RS04700 | | metalloprotease PmbA | 0.73 | RS_RS14550 | | monothiol glutaredoxin, Grx4 family | — | — |
| Dechlorosoma suillum PS | 0.51 | Dsui_1234 | | putative Zn-dependent protease-like protein | 0.62 | Dsui_0118 | | monothiol glutaredoxin, Grx4 family | low | > 51 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.46 | Xcc-8004.1885.1 | | TldE protein, part of TldE/TldD proteolytic complex | 0.55 | Xcc-8004.2014.1 | | Glutaredoxin-related protein | — | — |
| Pseudomonas sp. RS175 | 0.46 | PFR28_00163 | | Metalloprotease PmbA | 0.41 | PFR28_03360 | | Glutaredoxin 4 | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.45 | Pf6N2E2_3278 | | TldE protein, part of TldE/TldD proteolytic complex | 0.43 | Pf6N2E2_5582 | | Glutaredoxin-related protein | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.45 | AO356_07085 | | peptidase PmbA | 0.43 | AO356_18290 | | glutaredoxin | — | — |
| Pectobacterium carotovorum WPP14 | 0.45 | HER17_RS20090 | | metalloprotease PmbA | 0.43 | HER17_RS09250 | | Grx4 family monothiol glutaredoxin | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.45 | PFLU_RS04350 | | metalloprotease PmbA | 0.41 | PFLU_RS05690 | | Grx4 family monothiol glutaredoxin | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.45 | PFLU_RS04350 | | metalloprotease PmbA | 0.41 | PFLU_RS05690 | | Grx4 family monothiol glutaredoxin | low | > 109 |
| Escherichia fergusonii Becca | 0.45 | EFB2_04298 | | Metalloprotease PmbA | 0.47 | EFB2_02339 | | Glutaredoxin 4 | low | > 86 |
| Rahnella sp. WP5 | 0.45 | EX31_RS12320 | | metalloprotease PmbA | 0.45 | EX31_RS13820 | | Grx4 family monothiol glutaredoxin | — | — |
| Enterobacter asburiae PDN3 | 0.45 | EX28DRAFT_3422 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.47 | EX28DRAFT_1651 | | monothiol glutaredoxin, Grx4 family | low | > 76 |
| Enterobacter sp. TBS_079 | 0.45 | MPMX20_00517 | | Metalloprotease PmbA | 0.47 | MPMX20_01983 | | Glutaredoxin 4 | low | > 85 |
| Escherichia coli BW25113 | 0.45 | b4235 | pmbA | predicted peptidase required for the maturation and secretion of the antibiotic peptide MccB17 (NCBI) | 0.47 | b1654 | ydhD | hypothetical protein (NCBI) | — | — |
| Escherichia coli ECRC62 | 0.45 | BNILDI_07325 | pmbA | metalloprotease PmbA | 0.47 | BNILDI_16725 | grxD | monothiol glutaredoxin 4 | low | > 75 |
| Escherichia coli Nissle 1917 | 0.45 | ECOLIN_RS24570 | | metalloprotease PmbA | 0.47 | ECOLIN_RS09220 | | monothiol glutaredoxin 4 | low | > 55 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.45 | OHPLBJKB_03800 | | Metalloprotease PmbA | 0.47 | OHPLBJKB_02071 | | Glutaredoxin 4 | low | > 73 |
| Escherichia coli ECRC99 | 0.45 | KEDOAH_16230 | pmbA | metalloprotease PmbA | 0.47 | KEDOAH_00695 | grxD | monothiol glutaredoxin 4 | — | — |
| Escherichia coli ECRC100 | 0.45 | OKFHMN_11925 | pmbA | metalloprotease PmbA | 0.47 | OKFHMN_27415 | grxD | monothiol glutaredoxin 4 | low | > 80 |
| Alteromonas macleodii MIT1002 | 0.45 | MIT1002_00230 | | peptidase PmbA | 0.43 | MIT1002_01235 | | Monothiol glutaredoxin | low | > 70 |
| Escherichia coli ECOR27 | 0.45 | NOLOHH_04185 | pmbA | metalloprotease PmbA | 0.47 | NOLOHH_17935 | grxD | monothiol glutaredoxin 4 | low | > 75 |
| Escherichia coli ECRC98 | 0.45 | JDDGAC_15565 | pmbA | metalloprotease PmbA | 0.47 | JDDGAC_02005 | grxD | monothiol glutaredoxin 4 | low | > 86 |
| Escherichia coli ECRC101 | 0.45 | MCAODC_02430 | pmbA | metalloprotease PmbA | 0.47 | MCAODC_17995 | grxD | monothiol glutaredoxin 4 | low | > 87 |
| Escherichia coli ECOR38 | 0.45 | HEPCGN_10125 | pmbA | metalloprotease PmbA | 0.47 | HEPCGN_05800 | grxD | monothiol glutaredoxin 4 | low | > 87 |
| Escherichia coli BL21 | 0.45 | ECD_04103 | | putative antibiotic peptide MccB17 maturation peptidase | 0.47 | ECD_01624 | | glutaredoxin-4 | low | > 61 |
| Escherichia coli ECRC102 | 0.45 | NIAGMN_09775 | pmbA | metalloprotease PmbA | 0.47 | NIAGMN_00650 | grxD | monothiol glutaredoxin 4 | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.45 | GFF904 | | TldE protein, part of TldE/TldD proteolytic complex | 0.47 | GFF3621 | | Glutaredoxin-related protein | low | > 78 |
| Pseudomonas putida KT2440 | 0.44 | PP_0942 | | regulatory protease | 0.45 | PP_1081 | | monothiol glutaredoxin 4 | — | — |
| Pseudomonas simiae WCS417 | 0.44 | PS417_04295 | | peptidase PmbA | 0.41 | PS417_05605 | | glutaredoxin | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.44 | Pf1N1B4_1090 | | TldE protein, part of TldE/TldD proteolytic complex | 0.42 | Pf1N1B4_759 | | Glutaredoxin-related protein | — | — |
| Serratia liquefaciens MT49 | 0.44 | IAI46_22575 | | metalloprotease PmbA | 0.46 | IAI46_11260 | | Grx4 family monothiol glutaredoxin | low | > 86 |
| Vibrio cholerae E7946 ATCC 55056 | 0.44 | CSW01_12845 | | metalloprotease PmbA | 0.43 | CSW01_10225 | | monothiol glutaredoxin, Grx4 family | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.44 | Psyr_4154 | | microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 | 0.42 | Psyr_3898 | | Glutaredoxin-related protein | — | — |
| Pseudomonas sp. S08-1 | 0.44 | OH686_08570 | | TldE protein, part of TldE/TldD proteolytic complex | 0.46 | OH686_20435 | | monothiol glutaredoxin, Grx4 family | low | > 80 |
| Pseudomonas syringae pv. syringae B728a | 0.44 | Psyr_4154 | | microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 | 0.42 | Psyr_3898 | | Glutaredoxin-related protein | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.44 | PfGW456L13_5024 | | TldE protein, part of TldE/TldD proteolytic complex | 0.42 | PfGW456L13_1742 | | Glutaredoxin-related protein | — | — |
| Klebsiella michiganensis M5al | 0.44 | BWI76_RS02850 | | metalloprotease PmbA | 0.48 | BWI76_RS16490 | | glutaredoxin | low | > 92 |
| Pseudomonas fluorescens FW300-N2E3 | 0.44 | AO353_05205 | | peptidase PmbA | 0.41 | AO353_04140 | | glutaredoxin | — | — |
| Pantoea sp. MT58 | 0.43 | IAI47_02765 | | metalloprotease PmbA | 0.43 | IAI47_10780 | | Grx4 family monothiol glutaredoxin | — | — |
| Dickeya dadantii 3937 | 0.43 | DDA3937_RS01500 | | metalloprotease PmbA | 0.46 | DDA3937_RS12610 | | Grx4 family monothiol glutaredoxin | low | > 74 |
| Shewanella sp. ANA-3 | 0.43 | Shewana3_3631 | | microcin-processing peptidase 1 (RefSeq) | 0.41 | Shewana3_1640 | | glutaredoxin-like protein (RefSeq) | 0.46 | 6 |
| Dickeya dianthicola ME23 | 0.42 | DZA65_RS01480 | | metalloprotease PmbA | 0.45 | DZA65_RS13125 | | Grx4 family monothiol glutaredoxin | low | > 75 |
| Lysobacter sp. OAE881 | 0.42 | ABIE51_RS06805 | | metalloprotease PmbA | 0.56 | ABIE51_RS15380 | | Grx4 family monothiol glutaredoxin | low | > 62 |
| Dickeya dianthicola 67-19 | 0.42 | HGI48_RS01415 | | metalloprotease PmbA | 0.45 | HGI48_RS12670 | | Grx4 family monothiol glutaredoxin | low | > 71 |
| Shewanella amazonensis SB2B | 0.42 | Sama_0482 | | PmbA protein (RefSeq) | 0.42 | Sama_1919 | | glutaredoxin-related protein (RefSeq) | — | — |
| Erwinia tracheiphila SCR3 | 0.42 | LU632_RS02145 | pmbA | metalloprotease PmbA | 0.45 | LU632_RS11215 | | Grx4 family monothiol glutaredoxin | — | — |
| Shewanella oneidensis MR-1 | 0.42 | SO4078 | pmbA | pmba protein (NCBI ptt file) | 0.41 | SO2880 | | glutaredoxin domain protein (NCBI ptt file) | — | — |
| Pseudomonas stutzeri RCH2 | 0.42 | Psest_3318 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.45 | Psest_1292 | | monothiol glutaredoxin, Grx4 family | low | > 67 |
| Shewanella loihica PV-4 | 0.41 | Shew_0416 | | peptidase U62, modulator of DNA gyrase (RefSeq) | 0.43 | Shew_1835 | | glutaredoxin-like protein (RefSeq) | — | — |
| Kangiella aquimarina DSM 16071 | 0.38 | B158DRAFT_2075 | | microcin-processing peptidase 1. Unknown type peptidase. MEROPS family U62 | 0.46 | B158DRAFT_1228 | | monothiol glutaredoxin, Grx4 family | low | > 40 |
| Azospirillum brasilense Sp245 | 0.33 | AZOBR_RS11930 | | modulator protein | 0.58 | AZOBR_RS04325 | | glutaredoxin | — | — |
| Azospirillum sp. SherDot2 | 0.30 | MPMX19_01886 | | Metalloprotease PmbA | 0.58 | MPMX19_00477 | | Glutaredoxin 4 | — | — |
| Phaeobacter inhibens DSM 17395 | 0.30 | PGA1_c33480 | | protein PmbA | 0.55 | PGA1_c17180 | | putative glutaredoxin | — | — |
| Caulobacter crescentus NA1000 | 0.28 | CCNA_00311 | | Zn-dependent protease family protein | 0.47 | CCNA_02591 | | glutaredoxin | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.28 | CCNA_00311 | | Zn-dependent protease family protein | 0.47 | CCNA_02591 | | glutaredoxin | — | — |
| Sinorhizobium meliloti 1021 | 0.28 | SMc00897 | | PMBA protein | 0.61 | SMc00538 | | hypothetical protein | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.28 | Ga0059261_0810 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.63 | Ga0059261_0058 | | monothiol glutaredoxin, Grx4 family | — | — |
| Dinoroseobacter shibae DFL-12 | 0.28 | Dshi_0064 | | peptidase U62 modulator of DNA gyrase (RefSeq) | 0.57 | Dshi_1710 | | glutaredoxin-like protein (RefSeq) | — | — |
| Magnetospirillum magneticum AMB-1 | 0.28 | AMB_RS22120 | | TldD/PmbA family protein | 0.51 | AMB_RS10680 | | monothiol glutaredoxin, Grx4 family | — | — |
| Rhodopseudomonas palustris CGA009 | 0.27 | TX73_005930 | | TldD/PmbA family protein | 0.57 | TX73_008250 | | Grx4 family monothiol glutaredoxin | low | > 86 |
| Rhodospirillum rubrum S1H | 0.26 | Rru_A0575 | | Peptidase U62, modulator of DNA gyrase (NCBI) | 0.54 | Rru_A0705 | | Glutaredoxin-related protein (NCBI) | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.26 | A4249_RS09195 | | TldD/PmbA family protein | 0.51 | A4249_RS00490 | | Grx4 family monothiol glutaredoxin | — | — |
| Rhizobium sp. OAE497 | 0.26 | ABIE40_RS03780 | | TldD/PmbA family protein | 0.61 | ABIE40_RS10200 | | Grx4 family monothiol glutaredoxin | low | > 107 |
| Agrobacterium fabrum C58 | 0.25 | Atu0693 | | PmbA/TldD related protein | 0.59 | Atu1854 | | glutaredoxin-related protein | — | — |
| Synechococcus elongatus PCC 7942 | 0.08 | Synpcc7942_1289 | pmbA | putative modulator of DNA gyrase | 0.55 | Synpcc7942_1145 | | Glutaredoxin-related protein | low | > 38 |
Not shown: 7 genomes with orthologs for GFF4697 only; 3 genomes with orthologs for GFF2522 only