Conservation of cofitness between Psest_3008 and Psest_1496 in Pseudomonas stutzeri RCH2

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3008 cobyric acid synthase CobQ 1.0 Psest_1496 Holliday junction DNA helicase, RuvA subunit 0.19 11
Pseudomonas putida KT2440 0.83 PP_1677 Adenosyl-cobyric acid synthase 0.82 PP_1216 Holliday junction ATP-dependent DNA helicase RuvA low > 96
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_3676 adenosylcobyric acid synthase (glutamine-hydrolysing) 0.84 Psyr_1409 Holliday junction DNA helicase subunit RuvA — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_3676 adenosylcobyric acid synthase (glutamine-hydrolysing) 0.84 Psyr_1409 Holliday junction DNA helicase subunit RuvA low > 86
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_5742 Cobyric acid synthase (EC 6.3.5.10) 0.83 Pf6N2E2_5536 Holliday junction DNA helicase RuvA low > 103
Pseudomonas sp. S08-1 0.80 OH686_04965 cobyric acid synthase CobQ 0.90 OH686_19130 Holliday junction DNA helicase RuvA — —
Pseudomonas fluorescens GW456-L13 0.79 PfGW456L13_4238 Cobyric acid synthase (EC 6.3.5.10) 0.84 PfGW456L13_1852 Holliday junction DNA helicase RuvA low > 87
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_3711 Cobyric acid synthase (EC 6.3.5.10) 0.83 Pf1N1B4_638 Holliday junction DNA helicase RuvA — —
Pseudomonas fluorescens FW300-N2E3 0.79 AO353_02615 cobyric acid synthase 0.83 AO353_03585 ATP-dependent DNA helicase RuvA low > 101
Pseudomonas sp. RS175 0.79 PFR28_03204 Cobyric acid synthase 0.83 PFR28_03413 Holliday junction ATP-dependent DNA helicase RuvA low > 88
Pseudomonas fluorescens FW300-N2C3 0.79 AO356_19160 cobyric acid synthase 0.83 AO356_18020 ATP-dependent DNA helicase RuvA low > 104
Pseudomonas simiae WCS417 0.79 PS417_20040 cobyric acid synthase 0.80 PS417_22450 ATP-dependent DNA helicase RuvA low > 88
Pseudomonas fluorescens SBW25 0.78 PFLU_RS22005 cobyric acid synthase 0.81 PFLU_RS24090 Holliday junction branch migration protein RuvA low > 109
Pseudomonas fluorescens SBW25-INTG 0.78 PFLU_RS22005 cobyric acid synthase 0.81 PFLU_RS24090 Holliday junction branch migration protein RuvA low > 109
Lysobacter sp. OAE881 0.70 ABIE51_RS04965 cobyric acid synthase 0.46 ABIE51_RS05045 Holliday junction branch migration protein RuvA low > 62
Ralstonia solanacearum GMI1000 0.69 RS_RS12000 cobyric acid synthase 0.42 RS_RS02490 Holliday junction branch migration protein RuvA — —
Ralstonia solanacearum PSI07 0.69 RPSI07_RS12925 cobyric acid synthase 0.41 RPSI07_RS21550 Holliday junction branch migration protein RuvA — —
Ralstonia solanacearum UW163 0.69 UW163_RS09225 cobyric acid synthase 0.41 UW163_RS01915 Holliday junction branch migration protein RuvA — —
Ralstonia solanacearum IBSBF1503 0.69 RALBFv3_RS04445 cobyric acid synthase 0.41 RALBFv3_RS11670 Holliday junction branch migration protein RuvA — —
Ralstonia sp. UNC404CL21Col 0.69 ABZR87_RS00040 cobyric acid synthase 0.41 ABZR87_RS07625 Holliday junction branch migration protein RuvA low > 80
Cupriavidus basilensis FW507-4G11 0.68 RR42_RS16075 cobyric acid synthase 0.43 RR42_RS02705 Holliday junction DNA helicase RuvA low > 128
Dyella japonica UNC79MFTsu3.2 0.67 ABZR86_RS10900 cobyric acid synthase 0.44 ABZR86_RS10840 Holliday junction branch migration protein RuvA low > 74
Rhodanobacter sp. FW510-T8 0.66 OKGIIK_05500 cobyric acid synthase 0.45 OKGIIK_01840 ruvA Holliday junction branch migration protein RuvA — —
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS04900 cobyric acid synthase 0.44 BPHYT_RS16615 holliday junction ATP-dependent DNA helicase RuvA — —
Paraburkholderia bryophila 376MFSha3.1 0.63 H281DRAFT_00146 adenosylcobyric acid synthase (glutamine-hydrolysing) 0.40 H281DRAFT_04254 Holliday junction DNA helicase subunit RuvA — —
Vibrio cholerae E7946 ATCC 55056 0.63 CSW01_17810 cobyric acid synthase CobQ 0.57 CSW01_09245 Holliday junction branch migration protein RuvA low > 62
Dechlorosoma suillum PS 0.63 Dsui_0542 cobyric acid synthase CobQ 0.45 Dsui_0485 Holliday junction DNA helicase, RuvA subunit — —
Paraburkholderia sabiae LMG 24235 0.63 QEN71_RS25095 cobyric acid synthase 0.41 QEN71_RS26795 Holliday junction branch migration protein RuvA — —
Shewanella oneidensis MR-1 0.63 SO1038 cobQ cobyric acid synthase CobQ (NCBI ptt file) 0.57 SO2430 ruvA Holliday junction DNA helicase RuvA (NCBI ptt file) low > 76
Paraburkholderia graminis OAS925 0.63 ABIE53_001255 adenosylcobyric acid synthase 0.42 ABIE53_003494 Holliday junction DNA helicase RuvA low > 113
Herbaspirillum seropedicae SmR1 0.63 HSERO_RS13230 cobyric acid synthase 0.40 HSERO_RS02090 Holliday junction DNA helicase RuvA low > 78
Shewanella sp. ANA-3 0.62 Shewana3_3275 cobyric acid synthase (RefSeq) 0.58 Shewana3_1956 ruvA Holliday junction DNA helicase RuvA (RefSeq) low > 73
Shewanella loihica PV-4 0.61 Shew_0717 cobyric acid synthase (RefSeq) 0.54 Shew_2076 Holliday junction DNA helicase RuvA (RefSeq) — —
Shewanella amazonensis SB2B 0.57 Sama_0765 cobyric acid synthase (RefSeq) 0.53 Sama_1840 ruvA Holliday junction DNA helicase RuvA (RefSeq) — —
Azospirillum brasilense Sp245 0.47 AZOBR_RS09845 cobyric acid synthase 0.28 AZOBR_RS09045 Holliday junction DNA helicase RuvA — —
Caulobacter crescentus NA1000 0.47 CCNA_02776 cobyric acid synthase CobQ 0.23 CCNA_03345 Holliday junction DNA helicase RuvA low > 66
Caulobacter crescentus NA1000 Δfur 0.47 CCNA_02776 cobyric acid synthase CobQ 0.23 CCNA_03345 Holliday junction DNA helicase RuvA — —
Magnetospirillum magneticum AMB-1 0.46 AMB_RS01485 cobyric acid synthase 0.29 AMB_RS16255 Holliday junction branch migration protein RuvA — —
Azospirillum sp. SherDot2 0.46 MPMX19_01025 Cobyric acid synthase 0.30 MPMX19_00697 Holliday junction ATP-dependent DNA helicase RuvA — —
Sphingomonas koreensis DSMZ 15582 0.46 Ga0059261_0630 adenosylcobyric acid synthase (glutamine-hydrolysing) (EC 6.3.5.10) 0.32 Ga0059261_0820 Holliday junction DNA helicase subunit RuvA — —
Rhodospirillum rubrum S1H 0.43 Rru_A3381 Cobyric acid synthase CobQ (NCBI) 0.29 Rru_A1088 DNA recombination protein RuvA (NCBI) — —
Sinorhizobium meliloti 1021 0.43 SMc04309 cobyric acid synthase 0.27 SMc03966 Holliday junction DNA helicase RuvA — —
Rhodopseudomonas palustris CGA009 0.43 TX73_003715 cobyric acid synthase 0.30 TX73_005655 Holliday junction branch migration protein RuvA — —
Rhizobium sp. OAE497 0.43 ABIE40_RS11175 cobyric acid synthase 0.26 ABIE40_RS15745 Holliday junction branch migration protein RuvA low > 107
Phaeobacter inhibens DSM 17395 0.41 PGA1_c24000 cobyric acid synthase CobQ 0.25 PGA1_c05860 holliday junction ATP-dependent DNA helicase RuvA — —
Dinoroseobacter shibae DFL-12 0.41 Dshi_2096 cobyric acid synthase CobQ (RefSeq) 0.28 Dshi_1104 Holliday junction DNA helicase RuvA (RefSeq) — —
Klebsiella michiganensis M5al 0.40 BWI76_RS23010 cobyric acid synthase CobQ 0.54 BWI76_RS18150 Holliday junction branch migration protein RuvA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF3966 Cobyric acid synthase (EC 6.3.5.10) 0.55 GFF1640 Holliday junction DNA helicase RuvA — —
Agrobacterium fabrum C58 0.40 Atu2808 cobyric acid synthase 0.27 Atu3723 Holliday junction DNA helicase RuvA — —
Fusobacterium nucleatum SB010 0.39 HUW76_05230 cobyric acid synthase 0.25 HUW76_06655 Holliday junction branch migration protein RuvA low > 35
Synechococcus elongatus PCC 7942 0.39 Synpcc7942_0211 cobQ cobyric acid synthase 0.34 Synpcc7942_2298 ruvA Holliday junction DNA helicase motor protein — —
Parabacteroides merdae CL09T00C40 0.39 HMPREF1078_RS00930 cobyric acid synthase 0.31 HMPREF1078_RS13015 Holliday junction branch migration protein RuvA low > 61
Bosea sp. OAE506 0.39 ABIE41_RS03845 cobyric acid synthase 0.28 ABIE41_RS09475 Holliday junction branch migration protein RuvA — —
Mycobacterium tuberculosis H37Rv 0.37 Rv0255c Probable cobyric acid synthase CobQ1 0.25 Rv2593c Probable holliday junction DNA helicase RuvA — —
Phocaeicola dorei CL03T12C01 0.36 ABI39_RS15660 cobyric acid synthase 0.29 ABI39_RS08200 Holliday junction branch migration protein RuvA — —
Phocaeicola vulgatus CL09T03C04 0.36 HMPREF1058_RS01395 cobyric acid synthase 0.29 HMPREF1058_RS00595 Holliday junction branch migration protein RuvA low > 67
Desulfovibrio vulgaris Hildenborough JW710 0.36 DVU0816 cobQ cobyric acid synthase CobQ (TIGR) 0.26 DVU2256 ruvA Holliday junction DNA helicase RuvA (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.36 DvMF_2864 cobyric acid synthase (RefSeq) 0.24 DvMF_3204 Holliday junction DNA helicase RuvA (RefSeq) — —
Variovorax sp. SCN45 0.34 GFF426 Cobyric acid synthase (EC 6.3.5.10) 0.45 GFF2073 Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12) low > 127
Variovorax sp. OAS795 0.32 ABID97_RS17340 cobyric acid synthase 0.45 ABID97_RS24920 Holliday junction branch migration protein RuvA low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF3998 Cobyric acid synthase (EC 6.3.5.10) 0.44 GFF1666 Holliday junction DNA helicase RuvA low > 90
Acidovorax sp. GW101-3H11 0.31 Ac3H11_999 Cobyric acid synthase (EC 6.3.5.10) 0.40 Ac3H11_4683 Holliday junction DNA helicase RuvA — —

Not shown: 2 genomes with orthologs for Psest_3008 only; 40 genomes with orthologs for Psest_1496 only