Conservation of cofitness between Psest_2285 and Psest_1492 in Pseudomonas stutzeri RCH2

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_2285 ATP-dependent protease La 1.0 Psest_1492 DNA-binding ferritin-like protein (oxidative damage protectant) 0.27 18
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_2216 ATP-dependent protease La (EC 3.4.21.53) Type I 0.84 Pf6N2E2_5529 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) — —
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_01740 DNA-binding protein 0.84 AO356_17990 ferritin low > 104
Pseudomonas sp. RS175 0.91 PFR28_01230 Lon protease 0.84 PFR28_03419 DNA protection during starvation protein 2 low > 88
Pseudomonas simiae WCS417 0.90 PS417_17225 DNA-binding protein 0.85 PS417_22480 ferritin — —
Pseudomonas fluorescens SBW25-INTG 0.90 PFLU_RS19160 endopeptidase La 0.85 PFLU_RS24120 DNA starvation/stationary phase protection protein 0.27 104
Pseudomonas sp. S08-1 0.90 OH686_03635 endopeptidase La 0.95 OH686_19105 DNA protection during starvation protein low > 80
Pseudomonas fluorescens SBW25 0.90 PFLU_RS19160 endopeptidase La 0.85 PFLU_RS24120 DNA starvation/stationary phase protection protein low > 109
Pseudomonas syringae pv. syringae B728a 0.89 Psyr_1749 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 0.84 Psyr_1404 Ferritin and Dps low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.89 Psyr_1749 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 0.84 Psyr_1404 Ferritin and Dps low > 86
Pseudomonas putida KT2440 0.88 PP_2302 DNA-binding, ATP-dependent protease 0.81 PP_1210 DNA-binding stress protein low > 96
Marinobacter adhaerens HP15 0.71 HP15_2183 DNA-binding ATP-dependent protease La 0.31 HP15_3253 ferritin-like DNA-binding protein low > 73
Shewanella sp. ANA-3 0.70 Shewana3_2659 Lon-A peptidase (RefSeq) 0.67 Shewana3_0985 Ferritin, Dps family protein (RefSeq) — —
Shewanella oneidensis MR-1 0.70 SO1796 lon ATP-dependent protease La (NCBI ptt file) 0.66 SO1158 Dps family protein (NCBI ptt file) low > 76
Dickeya dadantii 3937 0.69 DDA3937_RS05650 endopeptidase La 0.32 DDA3937_RS06890 DNA starvation/stationary phase protection protein low > 74
Dickeya dianthicola 67-19 0.69 HGI48_RS05695 endopeptidase La 0.32 HGI48_RS06880 DNA starvation/stationary phase protection protein low > 71
Klebsiella michiganensis M5al 0.69 BWI76_RS06535 endopeptidase La 0.16 BWI76_RS08980 DNA starvation/stationary phase protection protein low > 92
Dickeya dianthicola ME23 0.69 DZA65_RS06020 endopeptidase La 0.31 DZA65_RS07220 DNA starvation/stationary phase protection protein low > 75
Serratia liquefaciens MT49 0.69 IAI46_05020 endopeptidase La 0.32 IAI46_14135 DNA starvation/stationary phase protection protein low > 86
Shewanella amazonensis SB2B 0.69 Sama_1226 endopeptidase La (RefSeq) 0.61 Sama_2598 Dps family protein (RefSeq) low > 62
Enterobacter sp. TBS_079 0.68 MPMX20_01030 Lon protease 0.16 MPMX20_01442 DNA protection during starvation protein low > 85
Erwinia tracheiphila SCR3 0.68 LU632_RS18335 lon endopeptidase La 0.18 LU632_RS09460 dps DNA starvation/stationary phase protection protein Dps — —
Enterobacter asburiae PDN3 0.68 EX28DRAFT_2531 endopeptidase La 0.16 EX28DRAFT_2174 DNA-binding ferritin-like protein (oxidative damage protectant) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF4355 ATP-dependent protease La (EC 3.4.21.53) Type I 0.16 GFF707 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) low > 78
Pantoea sp. MT58 0.68 IAI47_14645 endopeptidase La 0.18 IAI47_13195 DNA starvation/stationary phase protection protein Dps — —
Vibrio cholerae E7946 ATCC 55056 0.68 CSW01_09605 endopeptidase La 0.26 CSW01_00700 DNA starvation/stationary phase protection protein low > 62
Escherichia coli Nissle 1917 0.68 ECOLIN_RS02635 endopeptidase La 0.16 ECOLIN_RS04330 DNA starvation/stationary phase protection protein Dps — —
Alteromonas macleodii MIT1002 0.68 MIT1002_02757 Lon protease 0.64 MIT1002_00525 DNA protection during starvation protein 2 low > 70
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS12785 endopeptidase La 0.75 ABZR87_RS01245 Dps family protein low > 80
Ralstonia solanacearum IBSBF1503 0.67 RALBFv3_RS01340 endopeptidase La 0.74 RALBFv3_RS05595 DNA starvation/stationary phase protection protein — —
Ralstonia solanacearum UW163 0.67 UW163_RS14650 endopeptidase La 0.74 UW163_RS08030 DNA starvation/stationary phase protection protein — —
Ralstonia solanacearum GMI1000 0.67 RS_RS08655 endopeptidase La 0.74 RS_RS13455 DNA starvation/stationary phase protection protein — —
Ralstonia solanacearum PSI07 0.67 RPSI07_RS16135 endopeptidase La 0.74 RPSI07_RS11705 DNA starvation/stationary phase protection protein — —
Paraburkholderia sabiae LMG 24235 0.67 QEN71_RS21975 endopeptidase La 0.77 QEN71_RS26610 Dps family protein low > 153
Kangiella aquimarina DSM 16071 0.66 B158DRAFT_1038 ATP-dependent protease La 0.66 B158DRAFT_0476 DNA-binding ferritin-like protein (oxidative damage protectant) low > 40
Lysobacter sp. OAE881 0.66 ABIE51_RS14145 endopeptidase La 0.66 ABIE51_RS05150 Dps family protein low > 62
Dyella japonica UNC79MFTsu3.2 0.66 ABZR86_RS07320 endopeptidase La 0.63 ABZR86_RS19715 Dps family protein low > 74
Rhodanobacter sp. FW510-T8 0.66 OKGIIK_08030 lon endopeptidase La 0.63 OKGIIK_02150 dps DNA-binding ferritin-like protein (oxidative damage protectant) low > 52
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_00898 ATP-dependent proteinase. Serine peptidase. MEROPS family S16 0.80 H281DRAFT_04677 starvation-inducible DNA-binding protein — —
Rhodanobacter denitrificans MT42 0.66 LRK55_RS16460 endopeptidase La 0.62 LRK55_RS12415 Dps family protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.66 LRK54_RS16735 endopeptidase La 0.63 LRK54_RS12710 DNA starvation/stationary phase protection protein low > 59
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS09460 peptidase 0.80 BPHYT_RS03480 ferritin — —
Dechlorosoma suillum PS 0.66 Dsui_2198 ATP-dependent protease La 0.72 Dsui_0822 DNA-binding ferritin-like protein (oxidative damage protectant) low > 51
Cupriavidus basilensis FW507-4G11 0.66 RR42_RS09030 DNA-binding protein 0.83 RR42_RS17370 ferritin — —
Xanthomonas campestris pv. campestris strain 8004 0.66 Xcc-8004.4046.1 ATP-dependent protease La (EC 3.4.21.53) Type I 0.62 Xcc-8004.1478.1 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) low > 74
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS12905 peptidase 0.77 HSERO_RS02145 ferritin — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.65 GFF4044 ATP-dependent protease La (EC 3.4.21.53) Type I 0.70 GFF2804 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) low > 90
Acidovorax sp. GW101-3H11 0.65 Ac3H11_937 ATP-dependent protease La (EC 3.4.21.53) Type I 0.71 Ac3H11_786 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) — —
Castellaniella sp019104865 MT123 0.65 ABCV34_RS05125 endopeptidase La 0.69 ABCV34_RS03580 Dps family protein — —
Paraburkholderia graminis OAS925 0.64 ABIE53_002117 ATP-dependent Lon protease 0.80 ABIE53_000838 starvation-inducible DNA-binding protein low > 113
Variovorax sp. OAS795 0.64 ABID97_RS17590 endopeptidase La 0.61 ABID97_RS01565 DNA starvation/stationary phase protection protein low > 91
Azospirillum brasilense Sp245 0.63 AZOBR_RS07145 peptidase 0.75 AZOBR_RS12945 ferritin — —
Azospirillum sp. SherDot2 0.63 MPMX19_01545 Lon protease 0.74 MPMX19_02373 DNA protection during starvation protein 2 low > 112
Variovorax sp. SCN45 0.63 GFF487 ATP-dependent protease La (EC 3.4.21.53) Type I 0.61 GFF5550 DNA protection during starvation protein low > 127
Rhodospirillum rubrum S1H 0.62 Rru_A1552 Peptidase S16, ATP-dependent protease La (NCBI) 0.76 Rru_A0333 Ferritin and Dps (NCBI) low > 58
Caulobacter crescentus NA1000 0.61 CCNA_02037 ATP-dependent endopeptidase Lon 0.50 CCNA_02966 non-specific DNA-binding protein Dps/iron-binding ferritin-like antioxidant protein/ferroxidase low > 66
Caulobacter crescentus NA1000 Δfur 0.61 CCNA_02037 ATP-dependent endopeptidase Lon 0.50 CCNA_02966 non-specific DNA-binding protein Dps/iron-binding ferritin-like antioxidant protein/ferroxidase — —
Rhodopseudomonas palustris CGA009 0.61 TX73_015345 endopeptidase La 0.71 TX73_014275 DNA starvation/stationary phase protection protein — —
Rhizobium sp. OAE497 0.61 ABIE40_RS07100 endopeptidase La 0.35 ABIE40_RS18810 DNA starvation/stationary phase protection protein — —
Brevundimonas sp. GW460-12-10-14-LB2 0.60 A4249_RS06460 endopeptidase La 0.26 A4249_RS05095 DNA starvation/stationary phase protection protein — —
Phaeobacter inhibens DSM 17395 0.59 PGA1_c20540 ATP-dependent protease La 0.36 PGA1_c27100 putative ferritin — —
Dinoroseobacter shibae DFL-12 0.59 Dshi_1777 ATP-dependent protease La (RefSeq) 0.36 Dshi_3839 Ferritin Dps family protein (RefSeq) low > 64
Sphingomonas koreensis DSMZ 15582 0.58 Ga0059261_0102 endopeptidase La 0.26 Ga0059261_2678 DNA-binding ferritin-like protein (oxidative damage protectant) low > 68
Acinetobacter radioresistens SK82 0.55 MPMX26_02299 Lon protease 0.71 MPMX26_01495 DNA protection during starvation protein 2 low > 36
Mucilaginibacter yixingensis YX-36 DSM 26809 0.44 ABZR88_RS15670 endopeptidase La 0.30 ABZR88_RS06705 Dps family protein low > 71
Fusobacterium nucleatum SB010 0.43 HUW76_01065 endopeptidase La 0.18 HUW76_06750 DNA starvation/stationary phase protection protein low > 35
Pontibacter actiniarum KMM 6156, DSM 19842 0.42 CA264_00045 endopeptidase La 0.31 CA264_13770 DNA starvation/stationary phase protection protein low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.42 CA265_RS14555 endopeptidase La 0.26 CA265_RS06325 DNA starvation/stationary phase protection protein low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.42 Echvi_4670 ATP-dependent protease La 0.28 Echvi_0586 DNA-binding ferritin-like protein (oxidative damage protectant) low > 79
Bacteroides stercoris CC31F 0.41 HMPREF1181_RS14340 endopeptidase La 0.29 HMPREF1181_RS02165 DNA starvation/stationary phase protection protein low > 56
Bacteroides ovatus ATCC 8483 0.40 BACOVA_02571 endopeptidase La 0.28 BACOVA_05566 DNA protection during starvation protein low > 94
Phocaeicola dorei CL03T12C01 0.40 ABI39_RS16520 endopeptidase La 0.30 ABI39_RS06080 DNA starvation/stationary phase protection protein low > 72
Parabacteroides merdae CL09T00C40 0.39 HMPREF1078_RS16185 endopeptidase La 0.29 HMPREF1078_RS01145 Dps family protein low > 61

Not shown: 25 genomes with orthologs for Psest_2285 only; 2 genomes with orthologs for Psest_1492 only