Conservation of cofitness between Psest_1058 and Psest_1241 in Pseudomonas stutzeri RCH2

81 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1058 ribosomal-protein-alanine acetyltransferase 1.0 Psest_1241 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.24 6
Pseudomonas putida KT2440 0.83 PP_0697 ribosomal-protein-S18-alanine N-acetyltransferase 0.83 PP_0832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.43 8
Pseudomonas fluorescens FW300-N2E3 0.81 AO353_14585 ribosomal-protein-alanine acetyltransferase 0.83 AO353_15785 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.36 31
Pseudomonas fluorescens GW456-L13 0.80 PfGW456L13_1551 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) 0.83 PfGW456L13_4883 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) 0.31 84
Pseudomonas fluorescens SBW25-INTG 0.80 PFLU_RS03395 ribosomal-protein-alanine N-acetyltransferase 0.81 PFLU_RS24905 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 109
Pseudomonas fluorescens FW300-N2C3 0.80 AO356_16260 ribosomal-protein-alanine acetyltransferase 0.81 AO356_06695 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 104
Pseudomonas fluorescens SBW25 0.80 PFLU_RS03395 ribosomal-protein-alanine N-acetyltransferase 0.81 PFLU_RS24905 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.73 2
Pseudomonas fluorescens FW300-N2E2 0.80 Pf6N2E2_5188 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) 0.81 Pf6N2E2_3199 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) low > 103
Pseudomonas simiae WCS417 0.80 PS417_03300 alanine acetyltransferase 0.82 PS417_23250 S-adenosylmethionine tRNA ribosyltransferase low > 88
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_2891 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) 0.83 Pf1N1B4_3005 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) low > 87
Pseudomonas sp. RS175 0.79 PFR28_03681 [Ribosomal protein S18]-alanine N-acetyltransferase 0.81 PFR28_00276 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 88
Pseudomonas sp. S08-1 0.74 OH686_08035 ribosomal-protein-alanine acetyltransferase 0.84 OH686_17425 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 80
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_0857 [SSU ribosomal protein S18P]-alanine acetyltransferase 0.81 Psyr_1227 Queuosine biosynthesis protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_0857 [SSU ribosomal protein S18P]-alanine acetyltransferase 0.81 Psyr_1227 Queuosine biosynthesis protein low > 86
Dechlorosoma suillum PS 0.46 Dsui_2404 ribosomal-protein-alanine acetyltransferase 0.50 Dsui_3322 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 51
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.4455.1 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) 0.55 Xcc-8004.2167.1 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) low > 74
Lysobacter sp. OAE881 0.45 ABIE51_RS04455 ribosomal protein S18-alanine N-acetyltransferase 0.53 ABIE51_RS15025 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 62
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS10720 alanine acetyltransferase 0.56 HSERO_RS06170 S-adenosylmethionine tRNA ribosyltransferase low > 78
Marinobacter adhaerens HP15 0.39 HP15_540 ribosomal-protein-alanine acetyltransferase 0.67 HP15_1478 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 73
Acidovorax sp. GW101-3H11 0.39 Ac3H11_667 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) 0.49 Ac3H11_778 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) low > 79
Serratia liquefaciens MT49 0.39 IAI46_02870 ribosomal protein S18-alanine N-acetyltransferase 0.67 IAI46_04835 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.51 43
Shewanella amazonensis SB2B 0.37 Sama_2596 ribosomal-protein-alanine acetyltransferase (RefSeq) 0.69 Sama_2194 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase (RefSeq) 0.41 27
Kangiella aquimarina DSM 16071 0.37 B158DRAFT_2236 [SSU ribosomal protein S18P]-alanine acetyltransferase (EC 2.3.1.128) 0.62 B158DRAFT_2515 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 40
Dickeya dianthicola 67-19 0.36 HGI48_RS03330 ribosomal protein S18-alanine N-acetyltransferase 0.69 HGI48_RS05525 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 71
Rahnella sp. WP5 0.36 EX31_RS04110 ribosomal protein S18-alanine N-acetyltransferase 0.68 EX31_RS22090 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 89
Dickeya dianthicola ME23 0.36 DZA65_RS03375 ribosomal protein S18-alanine N-acetyltransferase 0.69 DZA65_RS05850 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 75
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_03460 ribosomal-protein-alanine N-acetyltransferase 0.68 CSW01_03840 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 62
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS04340 ribosomal protein S18-alanine N-acetyltransferase 0.54 LRK54_RS03135 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 59
Rhodanobacter denitrificans MT42 0.35 LRK55_RS04115 ribosomal protein S18-alanine N-acetyltransferase 0.54 LRK55_RS02885 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 63
Pectobacterium carotovorum WPP14 0.35 HER17_RS18090 ribosomal protein S18-alanine N-acetyltransferase 0.67 HER17_RS15995 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 75
Dickeya dadantii 3937 0.35 DDA3937_RS03180 ribosomal protein S18-alanine N-acetyltransferase 0.69 DDA3937_RS05465 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 74
Ralstonia solanacearum PSI07 0.35 RPSI07_RS17290 ribosomal-protein-alanine N-acetyltransferase 0.54 RPSI07_RS11620 S-adenosylmethionine:tRNA ribosyltransferase-isomerase — —
Paraburkholderia graminis OAS925 0.35 ABIE53_002532 ribosomal-protein-alanine N-acetyltransferase 0.50 ABIE53_000832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.39 82
Rhodanobacter sp. FW510-T8 0.35 OKGIIK_11225 rimI ribosomal protein S18-alanine N-acetyltransferase 0.53 OKGIIK_10005 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 52
Acinetobacter radioresistens SK82 0.35 MPMX26_02428 [Ribosomal protein S18]-alanine N-acetyltransferase 0.52 MPMX26_00441 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 36
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF2766 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) 0.48 GFF2801 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) low > 90
Ralstonia solanacearum IBSBF1503 0.34 RALBFv3_RS00190 ribosomal-protein-alanine N-acetyltransferase 0.54 RALBFv3_RS05680 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Ralstonia solanacearum UW163 0.34 UW163_RS13520 ribosomal-protein-alanine N-acetyltransferase 0.54 UW163_RS07945 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS12055 acyltransferase 0.54 RR42_RS17395 S-adenosylmethionine tRNA ribosyltransferase low > 128
Variovorax sp. SCN45 0.34 GFF5521 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.128) 0.51 GFF5535 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) low > 127
Escherichia coli BL21 0.34 ECD_04248 ribosomal-protein-S18-alanine N-acetyltransferase 0.66 ECD_00353 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 60
Escherichia coli Nissle 1917 0.34 ECOLIN_RS25100 ribosomal protein S18-alanine N-acetyltransferase 0.65 ECOLIN_RS02440 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Escherichia fergusonii Becca 0.34 EFB2_04074 [Ribosomal protein S18]-alanine N-acetyltransferase 0.66 EFB2_03652 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 86
Escherichia coli ECRC99 0.34 KEDOAH_16855 rimI ribosomal protein S18-alanine N-acetyltransferase 0.66 KEDOAH_19455 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Escherichia coli BW25113 0.34 b4373 rimI ribosomal-protein-alanine N-acetyltransferase (NCBI) 0.66 b0405 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI) low > 76
Escherichia coli ECRC101 0.34 OKFHMN_11290 rimI ribosomal protein S18-alanine N-acetyltransferase 0.66 OKFHMN_08510 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Escherichia coli ECRC98 0.34 JDDGAC_14885 rimI ribosomal protein S18-alanine N-acetyltransferase 0.66 JDDGAC_12165 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Escherichia coli ECOR38 0.34 HEPCGN_09295 rimI ribosomal protein S18-alanine N-acetyltransferase 0.66 HEPCGN_07150 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.34 OHPLBJKB_03689 Ribosomal-protein-alanine acetyltransferase 0.66 OHPLBJKB_03271 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 73
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS10505 ribosomal protein S18-alanine N-acetyltransferase 0.53 ABZR86_RS09545 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 74
Escherichia coli ECRC101 0.34 MCAODC_01805 rimI ribosomal protein S18-alanine N-acetyltransferase 0.66 MCAODC_27735 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Escherichia coli ECRC62 0.34 BNILDI_07990 rimI ribosomal protein S18-alanine N-acetyltransferase 0.66 BNILDI_22860 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Enterobacter asburiae PDN3 0.34 EX28DRAFT_3581 ribosomal-protein-alanine acetyltransferase 0.67 EX28DRAFT_2566 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 76
Escherichia coli ECRC102 0.34 NIAGMN_09140 rimI ribosomal protein S18-alanine N-acetyltransferase 0.66 NIAGMN_06565 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Escherichia coli ECOR27 0.34 NOLOHH_03610 rimI ribosomal protein S18-alanine N-acetyltransferase 0.66 NOLOHH_01445 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 57
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS06290 ribosomal protein S18-alanine N-acetyltransferase 0.51 QEN71_RS26635 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 153
Klebsiella michiganensis M5al 0.33 BWI76_RS04090 ribosomal-protein-alanine N-acetyltransferase RimI 0.67 BWI76_RS06295 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 92
Pantoea sp. MT58 0.33 IAI47_16365 ribosomal protein S18-alanine N-acetyltransferase 0.68 IAI47_14810 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 76
Variovorax sp. OAS795 0.32 ABID97_RS01660 ribosomal protein S18-alanine N-acetyltransferase 0.52 ABID97_RS01590 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 91
Enterobacter sp. TBS_079 0.31 MPMX20_00671 [Ribosomal protein S18]-alanine N-acetyltransferase 0.67 MPMX20_00996 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 85
Shewanella sp. ANA-3 0.30 Shewana3_0987 SSU ribosomal protein S18P alanine acetyltransferase (RefSeq) 0.69 Shewana3_1434 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase (RefSeq) — —
Ralstonia solanacearum GMI1000 0.30 RS_RS06860 ribosomal-protein-alanine N-acetyltransferase 0.54 RS_RS13570 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Erwinia tracheiphila SCR3 0.30 LU632_RS03760 rimI ribosomal protein S18-alanine N-acetyltransferase 0.67 LU632_RS18485 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 74
Shewanella oneidensis MR-1 0.30 SO1160 rimI ribosomal-protein-alanine acetyltransferase (NCBI ptt file) 0.69 SO3114 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI ptt file) low > 76
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS12265 alanine acetyltransferase 0.51 BPHYT_RS03405 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 109
Shewanella loihica PV-4 0.29 Shew_2943 ribosomal-protein-alanine acetyltransferase (RefSeq) 0.69 Shew_2338 S-adenosylmethionine--tRNA-ribosyltransferase-isomerase (RefSeq) — —
Paraburkholderia bryophila 376MFSha3.1 0.28 H281DRAFT_00584 [SSU ribosomal protein S18P]-alanine acetyltransferase 0.51 H281DRAFT_04671 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 103
Brevundimonas sp. GW460-12-10-14-LB2 0.28 A4249_RS14730 GNAT family N-acetyltransferase 0.42 A4249_RS08775 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 48
Caulobacter crescentus NA1000 Δfur 0.25 CCNA_00056 ribosomal-protein-S18-alanine acetyltransferase 0.37 CCNA_01658 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 67
Caulobacter crescentus NA1000 0.25 CCNA_00056 ribosomal-protein-S18-alanine acetyltransferase 0.37 CCNA_01658 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.42 30
Alteromonas macleodii MIT1002 0.24 MIT1002_01178 ribosomal-protein-alanine N-acetyltransferase 0.64 MIT1002_02814 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 70
Rhizobium sp. OAE497 0.24 ABIE40_RS01720 N-acetyltransferase 0.40 ABIE40_RS09430 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 107
Dinoroseobacter shibae DFL-12 0.24 Dshi_2841 ribosomal-protein-alanine acetyltransferase (RefSeq) 0.41 Dshi_1180 Queuosine biosynthesis protein (RefSeq) low > 64
Agrobacterium fabrum C58 0.22 Atu0353 acetyltransferase 0.38 Atu1678 S-adenosylmethionine tRNA ribosyltransferase-isomerase low > 89
Sphingomonas koreensis DSMZ 15582 0.21 Ga0059261_1914 Acetyltransferases 0.38 Ga0059261_1011 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 68
Azospirillum sp. SherDot2 0.21 MPMX19_02604 Mycothiol acetyltransferase 0.42 MPMX19_01696 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 112
Rhodopseudomonas palustris CGA009 0.20 TX73_002340 ribosomal protein S18-alanine N-acetyltransferase 0.34 TX73_013480 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 86
Sinorhizobium meliloti 1021 0.20 SMc01117 acetyltransferase 0.38 SMc01207 S-adenosylmethionine--tRNA ribosyltransferase-isomerase — —
Desulfovibrio vulgaris Hildenborough JW710 0.19 DVU1678 rimI ribosomal-protein-alanine acetyltransferase (TIGR) 0.41 DVU3351 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase (TIGR) low > 55
Magnetospirillum magneticum AMB-1 0.18 AMB_RS22555 N-acetyltransferase 0.38 AMB_RS03085 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 64
Bacteroides thetaiotaomicron VPI-5482 0.17 BT1473 conserved hypothetical protein (NCBI ptt file) 0.35 BT3214 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.17 BACOVA_04204 ribosomal-protein-alanine acetyltransferase 0.35 BACOVA_02915 S-adenosylmethionine:tRNA ribosyltransferase-isomerase — —

Not shown: 1 genomes with orthologs for Psest_1058 only; 18 genomes with orthologs for Psest_1241 only