| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Enterobacter asburiae PDN3 | 1.0 | EX28DRAFT_3857 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 1.0 | EX28DRAFT_0941 | | cob(I)alamin adenosyltransferase | 0.49 | 19 |
| Enterobacter sp. TBS_079 | 0.98 | MPMX20_00127 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.96 | MPMX20_02506 | | Corrinoid adenosyltransferase | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.95 | GFF408 | | 'tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)' transl_table=11 | 0.87 | GFF2718 | | Cob(I)alamin adenosyltransferase (EC 2.5.1.17) | low | > 78 |
| Escherichia coli BW25113 | 0.95 | b3606 | yibK | predicted rRNA methylase (NCBI) | 0.89 | b1270 | btuR | cob(I)yrinic acid a,c-diamide adenosyltransferase (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.95 | HEPCGN_14605 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | 0.89 | HEPCGN_25575 | cobO | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 87 |
| Escherichia coli Nissle 1917 | 0.95 | ECOLIN_RS20585 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.89 | ECOLIN_RS07640 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 55 |
| Escherichia fergusonii Becca | 0.94 | EFB2_00204 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.89 | EFB2_02657 | | Corrinoid adenosyltransferase | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.94 | OHPLBJKB_00093 | | 'tRNA (cytidine(34)-2'-O)-methyltransferase' transl_table=11 | 0.89 | OHPLBJKB_02414 | | Cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 73 |
| Escherichia coli BL21 | 0.94 | ECD_03464 | | tRNA Leu mC34,mU34 2'-O-methyltransferase, SAM-dependent | 0.89 | ECD_01246 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 61 |
| Escherichia coli ECRC102 | 0.93 | NIAGMN_13525 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | 0.89 | NIAGMN_26795 | cobO | cob(I)yrinic acid a,c-diamide adenosyltransferase | — | — |
| Escherichia coli ECRC98 | 0.93 | JDDGAC_19390 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | 0.89 | JDDGAC_05170 | cobO | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 86 |
| Escherichia coli ECRC62 | 0.93 | BNILDI_03870 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | 0.89 | BNILDI_18440 | cobO | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 75 |
| Escherichia coli ECRC100 | 0.93 | OKFHMN_15765 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | 0.89 | OKFHMN_02625 | cobO | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 80 |
| Escherichia coli ECRC101 | 0.93 | MCAODC_06275 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | 0.89 | MCAODC_15640 | cobO | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 87 |
| Escherichia coli ECOR27 | 0.93 | NOLOHH_07645 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | 0.89 | NOLOHH_20290 | cobO | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 75 |
| Escherichia coli ECRC99 | 0.93 | KEDOAH_12385 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | 0.89 | KEDOAH_26140 | cobO | cob(I)yrinic acid a,c-diamide adenosyltransferase | — | — |
| Klebsiella michiganensis M5al | 0.92 | BWI76_RS27200 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.88 | BWI76_RS11900 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 92 |
| Serratia liquefaciens MT49 | 0.87 | IAI46_24670 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.79 | IAI46_13990 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 86 |
| Pantoea sp. MT58 | 0.84 | IAI47_00750 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.81 | IAI47_09215 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 76 |
| Rahnella sp. WP5 | 0.84 | EX31_RS14330 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.83 | EX31_RS09915 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 89 |
| Pseudomonas sp. S08-1 | 0.65 | OH686_14675 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.48 | OH686_04990 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 80 |
| Vibrio cholerae E7946 ATCC 55056 | 0.64 | CSW01_13605 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.68 | CSW01_05290 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 62 |
| Rhodanobacter sp. FW510-T8 | 0.64 | OKGIIK_13255 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.47 | OKGIIK_05480 | cobO | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 52 |
| Shewanella amazonensis SB2B | 0.63 | Sama_3440 | | RNA methyltransferase TrmH, group 2 (RefSeq) | 0.66 | Sama_0766 | | cob(I)yrinic acid a,c-diamide adenosyltransferase (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.63 | SO4529 | | RNA methyltransferase, TrmH family, group 2 (NCBI ptt file) | 0.64 | SO1039 | cobO | cob(I)alamin adenosyltransferase (NCBI ptt file) | low | > 76 |
| Lysobacter sp. OAE881 | 0.63 | ABIE51_RS00285 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.45 | ABIE51_RS04945 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 62 |
| Shewanella sp. ANA-3 | 0.63 | Shewana3_3934 | | RNA methyltransferase (RefSeq) | 0.62 | Shewana3_3274 | | cob(I)yrinic acid a,c-diamide adenosyltransferase (RefSeq) | low | > 73 |
| Pseudomonas fluorescens FW300-N2C3 | 0.63 | AO356_09750 | | rRNA methylase | 0.45 | AO356_19135 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 104 |
| Pseudomonas stutzeri RCH2 | 0.62 | Psest_3934 | | rRNA methylase, putative, group 2 | 0.48 | Psest_3014 | | cob(I)alamin adenosyltransferase | low | > 67 |
| Pseudomonas putida KT2440 | 0.62 | PP_5052 | | tRNA(Leu) mC34,mU34 2'-O-ribose methyltransferase, AdoMet-dependent | 0.43 | PP_1672 | | cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase | low | > 96 |
| Pseudomonas fluorescens FW300-N1B4 | 0.62 | Pf1N1B4_1613 | | tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) | 0.43 | Pf1N1B4_3706 | | Cob(I)alamin adenosyltransferase (EC 2.5.1.17) | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.62 | AO353_12135 | | rRNA methylase | 0.46 | AO353_02640 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 101 |
| Paraburkholderia sabiae LMG 24235 | 0.62 | QEN71_RS01475 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.39 | QEN71_RS08695 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 153 |
| Pseudomonas simiae WCS417 | 0.61 | PS417_01625 | | rRNA methylase | 0.44 | PS417_20065 | | Cob(I)yrinic acid a,c-diamide adenosyltransferase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.61 | H281DRAFT_01998 | | tRNA (cytidine/uridine-2'-O-)-methyltransferase | 0.41 | H281DRAFT_06529 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.61 | ABIE53_000669 | | tRNA (cytidine/uridine-2'-O-)-methyltransferase | 0.41 | ABIE53_006184 | | cob(I)alamin adenosyltransferase | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.61 | BPHYT_RS02620 | | tRNA methyltransferase | 0.40 | BPHYT_RS24825 | | cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase | — | — |
| Pseudomonas sp. RS175 | 0.61 | PFR28_04942 | | 'tRNA (cytidine(34)-2'-O)-methyltransferase' transl_table=11 | 0.43 | PFR28_03209 | | Corrinoid adenosyltransferase | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.61 | Pf6N2E2_3828 | | tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) | 0.47 | Pf6N2E2_5737 | | Cob(I)alamin adenosyltransferase (EC 2.5.1.17) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.61 | PfGW456L13_349 | | tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) | 0.44 | PfGW456L13_4243 | | Cob(I)alamin adenosyltransferase (EC 2.5.1.17) | low | > 87 |
| Pseudomonas fluorescens SBW25 | 0.60 | PFLU_RS01675 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.44 | PFLU_RS22030 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.60 | PFLU_RS01675 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.44 | PFLU_RS22030 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 109 |
| Ralstonia sp. UNC404CL21Col | 0.59 | ABZR87_RS06775 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.47 | ABZR87_RS00080 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 80 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.59 | Psyr_4881 | | RNA methyltransferase TrmH, group 2 | 0.44 | Psyr_3681 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 86 |
| Cupriavidus basilensis FW507-4G11 | 0.59 | RR42_RS01855 | | rRNA methylase | 0.50 | RR42_RS16125 | | Cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 128 |
| Pseudomonas syringae pv. syringae B728a | 0.59 | Psyr_4881 | | RNA methyltransferase TrmH, group 2 | 0.44 | Psyr_3681 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 86 |
| Ralstonia solanacearum IBSBF1503 | 0.59 | RALBFv3_RS10925 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.41 | RALBFv3_RS20540 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | — | — |
| Ralstonia solanacearum UW163 | 0.59 | UW163_RS02655 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.41 | UW163_RS18635 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.59 | ABZR86_RS13445 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.43 | ABZR86_RS10920 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.43 | 9 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.58 | Xcc-8004.277.1 | | tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) | 0.47 | Xcc-8004.1393.1 | | Cob(I)alamin adenosyltransferase (EC 2.5.1.17) | low | > 74 |
| Ralstonia solanacearum GMI1000 | 0.58 | RS_RS01765 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.41 | RS_RS20065 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.58 | RPSI07_RS22385 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.42 | RPSI07_RS02200 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 81 |
| Variovorax sp. SCN45 | 0.57 | GFF2293 | | tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) | 0.37 | GFF444 | | Cob(I)alamin adenosyltransferase (EC 2.5.1.17) @ Cob(I)alamin adenosyltransferase (EC 2.5.1.17), clustered with cobalamin synthesis | low | > 127 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.57 | GFF684 | | tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) | 0.33 | GFF3983 | | Cob(I)alamin adenosyltransferase (EC 2.5.1.17) | — | — |
| Dickeya dianthicola 67-19 | 0.56 | HGI48_RS20615 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.80 | HGI48_RS10505 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 71 |
| Shewanella loihica PV-4 | 0.56 | Shew_3577 | | RNA methyltransferase (RefSeq) | 0.68 | Shew_0718 | | cob(I)yrinic acid a,c-diamide adenosyltransferase (RefSeq) | low | > 60 |
| Dickeya dianthicola ME23 | 0.56 | DZA65_RS21630 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.80 | DZA65_RS10985 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 75 |
| Dickeya dadantii 3937 | 0.56 | DDA3937_RS00755 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.80 | DDA3937_RS10505 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 74 |
| Variovorax sp. OAS795 | 0.56 | ABID97_RS23985 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.36 | ABID97_RS17395 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 91 |
| Dechlorosoma suillum PS | 0.56 | Dsui_1278 | | putative rRNA methylase SpoU family | 0.46 | Dsui_0532 | | cob(I)alamin adenosyltransferase | low | > 51 |
| Acidovorax sp. GW101-3H11 | 0.55 | Ac3H11_3896 | | tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) | 0.35 | Ac3H11_994 | | Cob(I)alamin adenosyltransferase (EC 2.5.1.17) | low | > 79 |
| Herbaspirillum seropedicae SmR1 | 0.55 | HSERO_RS20815 | | tRNA methyltransferase | 0.40 | HSERO_RS13260 | | cobinamide adenolsyltransferase | low | > 78 |
| Pectobacterium carotovorum WPP14 | 0.55 | HER17_RS00645 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.80 | HER17_RS10895 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 75 |
| Mycobacterium tuberculosis H37Rv | 0.48 | Rv3366 | | Probable tRNA/rRNA methylase SpoU (tRNA/rRNA methyltransferase) | 0.27 | Rv2849c | | Probable cob(I)alamin adenosyltransferase CobO (corrinoid adenosyltransferase) (corrinoid adotransferase activity) | low | > 58 |
| Fusobacterium nucleatum SB010 | 0.48 | HUW76_06985 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.26 | HUW76_00780 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 35 |
| Desulfovibrio vulgaris Miyazaki F | 0.40 | DvMF_0834 | | tRNA/rRNA methyltransferase (SpoU) (RefSeq) | 0.21 | DvMF_0199 | | ATP:corrinoid adenosyltransferase BtuR/CobO/CobP (RefSeq) | 0.78 | 2 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.39 | DVU2238 | | RNA methyltransferase, TrmH family (TIGR) | 0.21 | DVU1403 | cobO | cob(I)alamin adenosyltransferase (TIGR) | low | > 55 |
| Synechococcus elongatus PCC 7942 | 0.38 | Synpcc7942_1874 | | RNA methyltransferase TrmH, group 2 | 0.40 | Synpcc7942_0957 | cobO | cob(I)yrinic acid a,c-diamide adenosyltransferase | — | — |
| Azospirillum sp. SherDot2 | 0.37 | MPMX19_05011 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.39 | MPMX19_01024 | | Corrinoid adenosyltransferase | — | — |
| Rhodospirillum rubrum S1H | 0.37 | Rru_A0365 | | tRNA/rRNA methyltransferase (SpoU) (NCBI) | 0.42 | Rru_A3367 | | Cob(I)alamin adenosyltransferase (NCBI) | low | > 58 |
| Azospirillum brasilense Sp245 | 0.37 | AZOBR_RS20740 | | tRNA methyltransferase | 0.41 | AZOBR_RS09840 | | cobinamide adenolsyltransferase | low | > 97 |
| Sphingomonas koreensis DSMZ 15582 | 0.35 | Ga0059261_3218 | | Predicted rRNA methylase (SpoU class) | 0.41 | Ga0059261_0621 | | cob(I)yrinic acid a,c-diamide adenosyltransferase (EC 2.5.1.17) | low | > 68 |
| Rhodopseudomonas palustris CGA009 | 0.34 | TX73_006115 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.39 | TX73_003710 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 86 |
| Agrobacterium fabrum C58 | 0.33 | Atu2244 | | tRNA/rRNA methyltransferase | 0.40 | Atu2807 | | cob(I)alamin adenosyltransferase | low | > 89 |
| Rhizobium sp. OAE497 | 0.33 | ABIE40_RS13160 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.39 | ABIE40_RS11150 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | low | > 107 |
| Magnetospirillum magneticum AMB-1 | 0.31 | AMB_RS20670 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.41 | AMB_RS22645 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | — | — |
| Sinorhizobium meliloti 1021 | 0.30 | SMc00184 | | tRNA/rRNA methyltransferase | 0.41 | SMc04302 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | — | — |
| Bosea sp. OAE506 | 0.27 | ABIE41_RS11180 | | TrmH family RNA methyltransferase | 0.43 | ABIE41_RS01765 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | — | — |
Not shown: 10 genomes with orthologs for EX28DRAFT_3857 only; 3 genomes with orthologs for EX28DRAFT_0941 only