| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BL21 | 1.0 | ECD_03753 | | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein | 1.0 | ECD_03241 | | 3-dehydroquinate synthase | 0.40 | 13 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_05290 | glnG | nitrogen regulation protein NR(I) | 1.00 | BNILDI_02615 | aroB | 3-dehydroquinate synthase | low | > 75 |
| Escherichia coli ECRC100 | 1.00 | OKFHMN_14110 | glnG | nitrogen regulation protein NR(I) | 0.99 | OKFHMN_17115 | aroB | 3-dehydroquinate synthase | low | > 80 |
| Escherichia coli BW25113 | 1.00 | b3868 | glnG | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | 1.00 | b3389 | aroB | 3-dehydroquinate synthase (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_06240 | glnG | nitrogen regulation protein NR(I) | 1.00 | NOLOHH_08905 | aroB | 3-dehydroquinate synthase | low | > 75 |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_17735 | glnG | nitrogen regulation protein NR(I) | 0.99 | JDDGAC_20745 | aroB | 3-dehydroquinate synthase | — | — |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_14040 | glnG | nitrogen regulation protein NR(I) | 0.99 | KEDOAH_11025 | aroB | 3-dehydroquinate synthase | — | — |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_11865 | glnG | nitrogen regulation protein NR(I) | 0.99 | NIAGMN_14885 | aroB | 3-dehydroquinate synthase | — | — |
| Escherichia coli ECRC101 | 1.00 | MCAODC_04610 | glnG | nitrogen regulation protein NR(I) | 0.99 | MCAODC_07645 | aroB | 3-dehydroquinate synthase | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.99 | OHPLBJKB_04184 | | DNA-binding transcriptional regulator NtrC | 1.00 | OHPLBJKB_00314 | | 3-dehydroquinate synthase | low | > 73 |
| Escherichia coli ECOR38 | 0.99 | HEPCGN_12740 | glnG | nitrogen regulation protein NR(I) | 1.00 | HEPCGN_15935 | aroB | 3-dehydroquinate synthase | low | > 87 |
| Escherichia fergusonii Becca | 0.99 | EFB2_04748 | | DNA-binding transcriptional regulator NtrC | 1.00 | EFB2_00439 | | 3-dehydroquinate synthase | 0.70 | 21 |
| Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS22295 | | nitrogen regulation protein NR(I) | 0.99 | ECOLIN_RS19360 | | 3-dehydroquinate synthase | low | > 55 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.97 | GFF2220 | | Nitrogen regulation protein NR(I) | 0.86 | GFF630 | | 3-dehydroquinate synthase (EC 4.2.3.4) | 0.91 | 24 |
| Enterobacter sp. TBS_079 | 0.94 | MPMX20_04597 | | DNA-binding transcriptional regulator NtrC | 0.89 | MPMX20_04278 | | 3-dehydroquinate synthase | low | > 85 |
| Enterobacter asburiae PDN3 | 0.94 | EX28DRAFT_4350 | | nitrogen regulation protein NR(I) | 0.88 | EX28DRAFT_4153 | | 3-dehydroquinate synthase (EC 4.2.3.4) | low | > 76 |
| Klebsiella michiganensis M5al | 0.94 | BWI76_RS00385 | | nitrogen assimilation regulatory protein | 0.85 | BWI76_RS26085 | | 3-dehydroquinate synthase | low | > 92 |
| Pantoea sp. MT58 | 0.94 | IAI47_00450 | | nitrogen regulation protein NR(I) | 0.84 | IAI47_01895 | | 3-dehydroquinate synthase | — | — |
| Erwinia tracheiphila SCR3 | 0.92 | LU632_RS22135 | glnG | nitrogen regulation protein NR(I) | 0.82 | LU632_RS22865 | aroB | 3-dehydroquinate synthase | low | > 74 |
| Rahnella sp. WP5 | 0.92 | EX31_RS15880 | | nitrogen regulation protein NR(I) | 0.84 | EX31_RS04720 | | 3-dehydroquinate synthase | — | — |
| Serratia liquefaciens MT49 | 0.92 | IAI46_24960 | | nitrogen regulation protein NR(I) | 0.81 | IAI46_23700 | | 3-dehydroquinate synthase | 0.60 | 45 |
| Pectobacterium carotovorum WPP14 | 0.92 | HER17_RS21440 | | nitrogen regulation protein NR(I) | 0.79 | HER17_RS01780 | | 3-dehydroquinate synthase | low | > 75 |
| Dickeya dadantii 3937 | 0.92 | DDA3937_RS00125 | | nitrogen regulation protein NR(I) | 0.81 | DDA3937_RS19545 | | 3-dehydroquinate synthase | — | — |
| Dickeya dianthicola 67-19 | 0.91 | HGI48_RS21235 | | nitrogen regulation protein NR(I) | 0.80 | HGI48_RS19675 | | 3-dehydroquinate synthase | — | — |
| Dickeya dianthicola ME23 | 0.91 | DZA65_RS22210 | | nitrogen regulation protein NR(I) | 0.80 | DZA65_RS20760 | | 3-dehydroquinate synthase | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.72 | CSW01_13865 | | nitrogen regulation protein NR(I) | 0.63 | CSW01_13300 | | 3-dehydroquinate synthase | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.71 | MIT1002_03186 | | Nitrogen regulation protein NR(I) | 0.60 | MIT1002_00447 | | 3-dehydroquinate synthase | — | — |
| Shewanella oneidensis MR-1 | 0.70 | SO4472 | ntrC | nitrogen regulation protein NR(I) (NCBI ptt file) | 0.61 | SO0287 | aroB | 3-dehydroquinate synthase (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.70 | Sama_3427 | | response regulator receiver protein (RefSeq) | 0.62 | Sama_3367 | | 3-dehydroquinate synthase (RefSeq) | 0.64 | 8 |
| Shewanella sp. ANA-3 | 0.70 | Shewana3_0258 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) | 0.61 | Shewana3_3893 | aroB | 3-dehydroquinate synthase (RefSeq) | 0.75 | 34 |
| Shewanella loihica PV-4 | 0.69 | Shew_3561 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) | 0.60 | Shew_0214 | | 3-dehydroquinate synthase (RefSeq) | 0.69 | 28 |
| Pseudomonas fluorescens FW300-N2E2 | 0.68 | Pf6N2E2_3826 | | Nitrogen regulation protein NR(I) | 0.55 | Pf6N2E2_3754 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Pseudomonas simiae WCS417 | 0.68 | PS417_01635 | | nitrogen regulation protein NR(I) | 0.55 | PS417_01985 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.68 | AO356_09730 | | nitrogen regulation protein NR(I) | 0.55 | AO356_09385 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.68 | PFLU_RS01685 | | nitrogen regulation protein NR(I) | 0.55 | PFLU_RS02030 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens SBW25 | 0.68 | PFLU_RS01685 | | nitrogen regulation protein NR(I) | 0.55 | PFLU_RS02030 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.68 | Psyr_4822 | | Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) | 0.54 | Psyr_0409 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas sp. S08-1 | 0.68 | OH686_10640 | | nitrogen regulation protein NR(I) | 0.54 | OH686_10015 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.68 | Psyr_4822 | | Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) | 0.54 | Psyr_0409 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas sp. RS175 | 0.68 | PFR28_04944 | | DNA-binding transcriptional regulator NtrC | 0.54 | PFR28_05013 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas putida KT2440 | 0.68 | PP_5048 | | two-component system DNA-binding transcriptional dual regulator GlnL/GlnG | 0.55 | PP_5078 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.68 | AO353_12145 | | nitrogen regulation protein NR(I) | 0.54 | AO353_12505 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.67 | Pf1N1B4_1611 | | Nitrogen regulation protein NR(I) | 0.55 | Pf1N1B4_1537 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.67 | PfGW456L13_347 | | Nitrogen regulation protein NR(I) | 0.55 | PfGW456L13_275 | | 3-dehydroquinate synthase (EC 4.2.3.4) | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.66 | Psest_3932 | | nitrogen regulation protein NR(I) | 0.53 | Psest_3713 | | 3-dehydroquinate synthase | — | — |
| Marinobacter adhaerens HP15 | 0.65 | HP15_425 | | two-component response regulator NtrC | 0.53 | HP15_480 | | 3-dehydroquinate synthase | — | — |
| Acinetobacter radioresistens SK82 | 0.65 | MPMX26_01292 | | DNA-binding transcriptional regulator NtrC | 0.50 | MPMX26_02810 | | 3-dehydroquinate synthase | — | — |
| Ralstonia solanacearum PSI07 | 0.58 | RPSI07_RS17815 | | nitrogen regulation protein NR(I) | 0.51 | RPSI07_RS10300 | | 3-dehydroquinate synthase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.58 | RR42_RS12980 | | chemotaxis protein CheY | 0.52 | RR42_RS19005 | | 3-dehydroquinate synthase | 0.41 | 36 |
| Ralstonia solanacearum GMI1000 | 0.57 | RS_RS06320 | | nitrogen regulation protein NR(I) | 0.51 | RS_RS14880 | | 3-dehydroquinate synthase | — | — |
| Ralstonia solanacearum UW163 | 0.57 | UW163_RS13000 | | nitrogen regulation protein NR(I) | 0.50 | UW163_RS06680 | | 3-dehydroquinate synthase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.57 | RALBFv3_RS15540 | | nitrogen regulation protein NR(I) | 0.50 | RALBFv3_RS06935 | | 3-dehydroquinate synthase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.57 | ABZR87_RS11070 | | nitrogen regulation protein NR(I) | 0.50 | ABZR87_RS02590 | | 3-dehydroquinate synthase | low | > 80 |
| Dechlorosoma suillum PS | 0.56 | Dsui_1051 | | nitrogen regulation protein NR(I) | 0.53 | Dsui_1095 | | 3-dehydroquinate synthase | — | — |
| Variovorax sp. SCN45 | 0.56 | GFF3066 | | Nitrogen regulation protein NR(I), GlnG (=NtrC) | 0.50 | GFF5325 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Variovorax sp. OAS795 | 0.55 | ABID97_RS09945 | | nitrogen regulation protein NR(I) | 0.53 | ABID97_RS23255 | | 3-dehydroquinate synthase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.55 | QEN71_RS05675 | | nitrogen regulation protein NR(I) | 0.51 | QEN71_RS28035 | | 3-dehydroquinate synthase | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.55 | H281DRAFT_00454 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family | 0.51 | H281DRAFT_05615 | | 3-dehydroquinate synthase | — | — |
| Paraburkholderia graminis OAS925 | 0.55 | ABIE53_002804 | | two-component system nitrogen regulation response regulator GlnG | 0.52 | ABIE53_003740 | | 3-dehydroquinate synthase | — | — |
| Burkholderia phytofirmans PsJN | 0.54 | BPHYT_RS12935 | | chemotaxis protein CheY | 0.52 | BPHYT_RS17885 | | 3-dehydroquinate synthase | 0.56 | 16 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.54 | GFF5269 | | Nitrogen regulation protein NR(I) | 0.51 | GFF1331 | | 3-dehydroquinate synthase (EC 4.2.3.4) | low | > 90 |
| Acidovorax sp. GW101-3H11 | 0.53 | Ac3H11_4432 | | Nitrogen regulation protein NR(I) | 0.50 | Ac3H11_4705 | | 3-dehydroquinate synthase (EC 4.2.3.4) | low | > 79 |
| Castellaniella sp019104865 MT123 | 0.50 | ABCV34_RS03540 | | nitrogen regulation protein NR(I) | 0.46 | ABCV34_RS12705 | | 3-dehydroquinate synthase | — | — |
| Lysobacter sp. OAE881 | 0.49 | ABIE51_RS01360 | | nitrogen regulation protein NR(I) | 0.41 | ABIE51_RS16100 | | 3-dehydroquinate synthase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.48 | Xcc-8004.252.1 | | Nitrogen regulation protein NtrC | 0.41 | Xcc-8004.1615.1 | | 3-dehydroquinate synthase (EC 4.2.3.4) | low | > 74 |
| Rhodanobacter denitrificans MT42 | 0.47 | LRK55_RS07730 | | nitrogen regulation protein NR(I) | 0.41 | LRK55_RS04085 | | 3-dehydroquinate synthase | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.47 | LRK54_RS07980 | | nitrogen regulation protein NR(I) | 0.41 | LRK54_RS04310 | | 3-dehydroquinate synthase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.45 | OKGIIK_14465 | ntrC | nitrogen regulation protein NR(I) | 0.42 | OKGIIK_11185 | aroB | 3-dehydroquinate synthase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.44 | ABZR86_RS15515 | | nitrogen regulation protein NR(I) | 0.42 | ABZR86_RS10480 | | 3-dehydroquinate synthase | low | > 74 |
| Agrobacterium fabrum C58 | 0.43 | Atu1446 | | two component response regulator | 0.38 | Atu3625 | | 3-dehydroquinate synthase | — | — |
| Sinorhizobium meliloti 1021 | 0.42 | SMc01043 | | nitrogen assimilation regulatory protein | 0.38 | SMc00696 | | 3-dehydroquinate synthase | — | — |
| Rhizobium sp. OAE497 | 0.42 | ABIE40_RS09090 | | nitrogen regulation protein NR(I) | 0.38 | ABIE40_RS17670 | | 3-dehydroquinate synthase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.41 | TX73_013420 | | nitrogen regulation protein NR(I) | 0.37 | TX73_002610 | | 3-dehydroquinate synthase | — | — |
| Azospirillum sp. SherDot2 | 0.41 | MPMX19_01112 | | DNA-binding transcriptional regulator NtrC | 0.38 | MPMX19_02639 | | 3-dehydroquinate synthase | — | — |
| Azospirillum brasilense Sp245 | 0.41 | AZOBR_RS14430 | | chemotaxis protein CheY | 0.38 | AZOBR_RS03220 | | 3-dehydroquinate synthase | — | — |
| Magnetospirillum magneticum AMB-1 | 0.41 | AMB_RS11950 | | nitrogen regulation protein NR(I) | 0.40 | AMB_RS19865 | | 3-dehydroquinate synthase | — | — |
| Rhodospirillum rubrum S1H | 0.40 | Rru_A1678 | | Nitrogen Metabolism Transcriptional Regulator, NtrC, Fis Family (NCBI) | 0.42 | Rru_A3741 | | 3-dehydroquinate synthase (NCBI) | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.38 | Ga0059261_0137 | | nitrogen regulation protein NR(I) | 0.36 | Ga0059261_3591 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Dinoroseobacter shibae DFL-12 | 0.31 | Dshi_1572 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | 0.36 | Dshi_1608 | | 3-dehydroquinate synthase (RefSeq) | — | — |
Not shown: 2 genomes with orthologs for ECD_03753 only; 11 genomes with orthologs for ECD_03241 only