| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BL21 | 1.0 | ECD_03753 | | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein | 1.0 | ECD_02686 | | diaminopimelate decarboxylase, PLP-binding | 0.35 | 53 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_05290 | glnG | nitrogen regulation protein NR(I) | 1.00 | BNILDI_10310 | lysA | diaminopimelate decarboxylase | low | > 75 |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_06240 | glnG | nitrogen regulation protein NR(I) | 1.00 | NOLOHH_11830 | lysA | diaminopimelate decarboxylase | low | > 75 |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_14040 | glnG | nitrogen regulation protein NR(I) | 1.00 | KEDOAH_08185 | lysA | diaminopimelate decarboxylase | — | — |
| Escherichia coli ECRC100 | 1.00 | OKFHMN_14110 | glnG | nitrogen regulation protein NR(I) | 0.99 | OKFHMN_19945 | lysA | diaminopimelate decarboxylase | low | > 80 |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_17735 | glnG | nitrogen regulation protein NR(I) | 0.99 | JDDGAC_23610 | lysA | diaminopimelate decarboxylase | — | — |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_11865 | glnG | nitrogen regulation protein NR(I) | 0.99 | NIAGMN_17715 | lysA | diaminopimelate decarboxylase | — | — |
| Escherichia coli BW25113 | 1.00 | b3868 | glnG | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | 1.00 | b2838 | lysA | diaminopimelate decarboxylase, PLP-binding (NCBI) | low | > 76 |
| Escherichia coli ECRC101 | 1.00 | MCAODC_04610 | glnG | nitrogen regulation protein NR(I) | 0.99 | MCAODC_10470 | lysA | diaminopimelate decarboxylase | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.99 | OHPLBJKB_04184 | | DNA-binding transcriptional regulator NtrC | 1.00 | OHPLBJKB_00891 | | Diaminopimelate decarboxylase | low | > 73 |
| Escherichia coli ECOR38 | 0.99 | HEPCGN_12740 | glnG | nitrogen regulation protein NR(I) | 1.00 | HEPCGN_19565 | lysA | diaminopimelate decarboxylase | low | > 87 |
| Escherichia fergusonii Becca | 0.99 | EFB2_04748 | | DNA-binding transcriptional regulator NtrC | 1.00 | EFB2_01045 | | Diaminopimelate decarboxylase | low | > 86 |
| Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS22295 | | nitrogen regulation protein NR(I) | 1.00 | ECOLIN_RS15930 | | diaminopimelate decarboxylase | low | > 55 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.97 | GFF2220 | | Nitrogen regulation protein NR(I) | 0.88 | GFF1323 | | Diaminopimelate decarboxylase (EC 4.1.1.20) | low | > 78 |
| Enterobacter sp. TBS_079 | 0.94 | MPMX20_04597 | | DNA-binding transcriptional regulator NtrC | 0.90 | MPMX20_03705 | | Diaminopimelate decarboxylase | 0.80 | 2 |
| Enterobacter asburiae PDN3 | 0.94 | EX28DRAFT_4350 | | nitrogen regulation protein NR(I) | 0.88 | EX28DRAFT_2916 | | diaminopimelate decarboxylase | low | > 76 |
| Klebsiella michiganensis M5al | 0.94 | BWI76_RS00385 | | nitrogen assimilation regulatory protein | 0.88 | BWI76_RS23360 | | diaminopimelate decarboxylase | 0.47 | 59 |
| Pantoea sp. MT58 | 0.94 | IAI47_00450 | | nitrogen regulation protein NR(I) | 0.75 | IAI47_03860 | | diaminopimelate decarboxylase | 0.79 | 26 |
| Erwinia tracheiphila SCR3 | 0.92 | LU632_RS22135 | glnG | nitrogen regulation protein NR(I) | 0.76 | LU632_RS06040 | lysA | diaminopimelate decarboxylase | low | > 74 |
| Rahnella sp. WP5 | 0.92 | EX31_RS15880 | | nitrogen regulation protein NR(I) | 0.75 | EX31_RS13275 | | diaminopimelate decarboxylase | 0.72 | 62 |
| Serratia liquefaciens MT49 | 0.92 | IAI46_24960 | | nitrogen regulation protein NR(I) | 0.78 | IAI46_20520 | | diaminopimelate decarboxylase | 0.55 | 79 |
| Pectobacterium carotovorum WPP14 | 0.92 | HER17_RS21440 | | nitrogen regulation protein NR(I) | 0.77 | HER17_RS03710 | | diaminopimelate decarboxylase | low | > 75 |
| Dickeya dadantii 3937 | 0.92 | DDA3937_RS00125 | | nitrogen regulation protein NR(I) | 0.75 | DDA3937_RS17425 | | diaminopimelate decarboxylase | 0.78 | 21 |
| Dickeya dianthicola ME23 | 0.91 | DZA65_RS22210 | | nitrogen regulation protein NR(I) | 0.75 | DZA65_RS18550 | | diaminopimelate decarboxylase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.91 | HGI48_RS21235 | | nitrogen regulation protein NR(I) | 0.74 | HGI48_RS17485 | | diaminopimelate decarboxylase | 0.72 | 27 |
| Vibrio cholerae E7946 ATCC 55056 | 0.72 | CSW01_13865 | | nitrogen regulation protein NR(I) | 0.18 | CSW01_00635 | | diaminopimelate decarboxylase | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.71 | MIT1002_03186 | | Nitrogen regulation protein NR(I) | 0.16 | MIT1002_00160 | | Diaminopimelate decarboxylase | low | > 70 |
| Shewanella amazonensis SB2B | 0.70 | Sama_3427 | | response regulator receiver protein (RefSeq) | 0.20 | Sama_3250 | | diaminopimelate decarboxylase (RefSeq) | 0.54 | 50 |
| Shewanella oneidensis MR-1 | 0.70 | SO4472 | ntrC | nitrogen regulation protein NR(I) (NCBI ptt file) | 0.19 | SO4309 | lysA | diaminopimelate decarboxylase (NCBI ptt file) | 0.65 | 22 |
| Shewanella sp. ANA-3 | 0.70 | Shewana3_0258 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) | 0.19 | Shewana3_0390 | | diaminopimelate decarboxylase (RefSeq) | 0.76 | 28 |
| Shewanella loihica PV-4 | 0.69 | Shew_3561 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) | 0.18 | Shew_0322 | | diaminopimelate decarboxylase (RefSeq) | 0.62 | 59 |
| Pseudomonas simiae WCS417 | 0.68 | PS417_01635 | | nitrogen regulation protein NR(I) | 0.21 | PS417_27580 | | diaminopimelate decarboxylase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.68 | Pf6N2E2_3826 | | Nitrogen regulation protein NR(I) | 0.21 | Pf6N2E2_4419 | | Diaminopimelate decarboxylase (EC 4.1.1.20) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.68 | AO356_09730 | | nitrogen regulation protein NR(I) | 0.20 | AO356_12740 | | diaminopimelate decarboxylase | — | — |
| Pseudomonas fluorescens SBW25 | 0.68 | PFLU_RS01685 | | nitrogen regulation protein NR(I) | 0.21 | PFLU_RS29265 | | diaminopimelate decarboxylase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.68 | PFLU_RS01685 | | nitrogen regulation protein NR(I) | 0.21 | PFLU_RS29265 | | diaminopimelate decarboxylase | — | — |
| Pseudomonas sp. RS175 | 0.68 | PFR28_04944 | | DNA-binding transcriptional regulator NtrC | 0.21 | PFR28_04375 | | Diaminopimelate decarboxylase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.68 | Psyr_4822 | | Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) | 0.21 | Psyr_0182 | | diaminopimelate decarboxylase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.68 | Psyr_4822 | | Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) | 0.21 | Psyr_0182 | | diaminopimelate decarboxylase | — | — |
| Pseudomonas sp. S08-1 | 0.68 | OH686_10640 | | nitrogen regulation protein NR(I) | 0.20 | OH686_13800 | | diaminopimelate decarboxylase | low | > 80 |
| Pseudomonas fluorescens FW300-N2E3 | 0.68 | AO353_12145 | | nitrogen regulation protein NR(I) | 0.22 | AO353_09035 | | diaminopimelate decarboxylase | — | — |
| Pseudomonas putida KT2440 | 0.68 | PP_5048 | | two-component system DNA-binding transcriptional dual regulator GlnL/GlnG | 0.57 | PP_2077 | | diaminopimelate decarboxylase | low | > 96 |
| Pseudomonas fluorescens FW300-N1B4 | 0.67 | Pf1N1B4_1611 | | Nitrogen regulation protein NR(I) | 0.21 | Pf1N1B4_2174 | | Diaminopimelate decarboxylase (EC 4.1.1.20) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.67 | PfGW456L13_347 | | Nitrogen regulation protein NR(I) | 0.21 | PfGW456L13_845 | | Diaminopimelate decarboxylase (EC 4.1.1.20) | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.66 | Psest_3932 | | nitrogen regulation protein NR(I) | 0.20 | Psest_3764 | | diaminopimelate decarboxylase | — | — |
| Marinobacter adhaerens HP15 | 0.65 | HP15_425 | | two-component response regulator NtrC | 0.19 | HP15_247 | | diaminopimelate decarboxylase | — | — |
| Acinetobacter radioresistens SK82 | 0.65 | MPMX26_01292 | | DNA-binding transcriptional regulator NtrC | 0.19 | MPMX26_02232 | | Diaminopimelate decarboxylase | low | > 36 |
| Ralstonia solanacearum PSI07 | 0.58 | RPSI07_RS17815 | | nitrogen regulation protein NR(I) | 0.20 | RPSI07_RS10250 | | diaminopimelate decarboxylase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.58 | RR42_RS12980 | | chemotaxis protein CheY | 0.20 | RR42_RS19050 | | diaminopimelate decarboxylase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.58 | HSERO_RS15680 | | chemotaxis protein CheY | 0.19 | HSERO_RS00950 | | diaminopimelate decarboxylase | — | — |
| Ralstonia solanacearum GMI1000 | 0.57 | RS_RS06320 | | nitrogen regulation protein NR(I) | 0.20 | RS_RS14930 | | diaminopimelate decarboxylase | — | — |
| Ralstonia solanacearum UW163 | 0.57 | UW163_RS13000 | | nitrogen regulation protein NR(I) | 0.20 | UW163_RS06625 | | diaminopimelate decarboxylase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.57 | RALBFv3_RS15540 | | nitrogen regulation protein NR(I) | 0.20 | RALBFv3_RS06990 | | diaminopimelate decarboxylase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.57 | ABZR87_RS11070 | | nitrogen regulation protein NR(I) | 0.20 | ABZR87_RS02640 | | diaminopimelate decarboxylase | low | > 80 |
| Dechlorosoma suillum PS | 0.56 | Dsui_1051 | | nitrogen regulation protein NR(I) | 0.21 | Dsui_1182 | | diaminopimelate decarboxylase | — | — |
| Variovorax sp. SCN45 | 0.56 | GFF3066 | | Nitrogen regulation protein NR(I), GlnG (=NtrC) | 0.18 | GFF5315 | | Diaminopimelate decarboxylase (EC 4.1.1.20) | — | — |
| Variovorax sp. OAS795 | 0.55 | ABID97_RS09945 | | nitrogen regulation protein NR(I) | 0.18 | ABID97_RS23305 | | diaminopimelate decarboxylase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.55 | QEN71_RS05675 | | nitrogen regulation protein NR(I) | 0.19 | QEN71_RS28080 | | diaminopimelate decarboxylase | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.55 | H281DRAFT_00454 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family | 0.18 | H281DRAFT_05606 | | diaminopimelate decarboxylase | — | — |
| Paraburkholderia graminis OAS925 | 0.55 | ABIE53_002804 | | two-component system nitrogen regulation response regulator GlnG | 0.19 | ABIE53_003749 | | diaminopimelate decarboxylase | 0.28 | 92 |
| Burkholderia phytofirmans PsJN | 0.54 | BPHYT_RS12935 | | chemotaxis protein CheY | 0.62 | BPHYT_RS35090 | | diaminopimelate decarboxylase | low | > 109 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.54 | GFF5269 | | Nitrogen regulation protein NR(I) | 0.19 | GFF1341 | | Diaminopimelate decarboxylase (EC 4.1.1.20) | low | > 90 |
| Acidovorax sp. GW101-3H11 | 0.53 | Ac3H11_4432 | | Nitrogen regulation protein NR(I) | 0.65 | Ac3H11_3862 | | Diaminopimelate decarboxylase (EC 4.1.1.20) | — | — |
| Castellaniella sp019104865 MT123 | 0.50 | ABCV34_RS03540 | | nitrogen regulation protein NR(I) | 0.18 | ABCV34_RS12685 | | diaminopimelate decarboxylase | — | — |
| Lysobacter sp. OAE881 | 0.49 | ABIE51_RS01360 | | nitrogen regulation protein NR(I) | 0.26 | ABIE51_RS13675 | | diaminopimelate decarboxylase | low | > 62 |
| Rhodanobacter denitrificans MT42 | 0.47 | LRK55_RS07730 | | nitrogen regulation protein NR(I) | 0.25 | LRK55_RS11215 | | diaminopimelate decarboxylase | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.47 | LRK54_RS07980 | | nitrogen regulation protein NR(I) | 0.25 | LRK54_RS11485 | | diaminopimelate decarboxylase | low | > 59 |
| Rhodanobacter sp. FW510-T8 | 0.45 | OKGIIK_14465 | ntrC | nitrogen regulation protein NR(I) | 0.24 | OKGIIK_12375 | lysA | diaminopimelate decarboxylase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.44 | ABZR86_RS15515 | | nitrogen regulation protein NR(I) | 0.24 | ABZR86_RS12130 | | diaminopimelate decarboxylase | low | > 74 |
| Agrobacterium fabrum C58 | 0.43 | Atu1446 | | two component response regulator | 0.20 | Atu3601 | | diaminopimelate decarboxylase | — | — |
| Sinorhizobium meliloti 1021 | 0.42 | SMc01043 | | nitrogen assimilation regulatory protein | 0.19 | SMc00723 | | diaminopimelate DAP decarboxylase | — | — |
| Rhizobium sp. OAE497 | 0.42 | ABIE40_RS09090 | | nitrogen regulation protein NR(I) | 0.20 | ABIE40_RS17530 | | diaminopimelate decarboxylase | 0.88 | 5 |
| Rhodopseudomonas palustris CGA009 | 0.41 | TX73_013420 | | nitrogen regulation protein NR(I) | 0.22 | TX73_024635 | | diaminopimelate decarboxylase | — | — |
| Bosea sp. OAE506 | 0.41 | ABIE41_RS16785 | | nitrogen regulation protein NR(I) | 0.23 | ABIE41_RS08740 | | diaminopimelate decarboxylase | — | — |
| Azospirillum sp. SherDot2 | 0.41 | MPMX19_01112 | | DNA-binding transcriptional regulator NtrC | 0.22 | MPMX19_05819 | | Diaminopimelate decarboxylase | — | — |
| Azospirillum brasilense Sp245 | 0.41 | AZOBR_RS14430 | | chemotaxis protein CheY | 0.20 | AZOBR_RS16945 | | diaminopimelate decarboxylase | — | — |
| Magnetospirillum magneticum AMB-1 | 0.41 | AMB_RS11950 | | nitrogen regulation protein NR(I) | 0.21 | AMB_RS22725 | | diaminopimelate decarboxylase | — | — |
| Rhodospirillum rubrum S1H | 0.40 | Rru_A1678 | | Nitrogen Metabolism Transcriptional Regulator, NtrC, Fis Family (NCBI) | 0.22 | Rru_A0396 | | Diaminopimelate decarboxylase (NCBI) | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.38 | Ga0059261_0137 | | nitrogen regulation protein NR(I) | 0.22 | Ga0059261_2051 | | diaminopimelate decarboxylase (EC 4.1.1.20) (from data) | low | > 68 |
| Dinoroseobacter shibae DFL-12 | 0.31 | Dshi_1572 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | 0.21 | Dshi_3059 | | diaminopimelate decarboxylase (RefSeq) | — | — |
Not shown: 1 genomes with orthologs for ECD_03753 only; 20 genomes with orthologs for ECD_02686 only